RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 MPHOSPH8Q99549 860 aa7.47□□□□□ -1.21
VARS-222ENST00000470953 PRKRIP1Q9H875 184 aaPredicted RBP7.47□□□□□ -1.21
VARS-222ENST00000470953 LAS1LQ9Y4W2 734 aaKnown RBP7.47□□□□□ -1.21
VARS-222ENST00000470953 PCDHA11Q9Y5I1 949 aa7.47□□□□□ -1.21
VARS-222ENST00000470953 A0A1B0GUL6 1792 aa7.46□□□□□ -1.21
VARS-222ENST00000470953 PHIPQ8WWQ0 1821 aa7.46□□□□□ -1.21
VARS-222ENST00000470953 PHF20L1A8MW92 1017 aa7.46□□□□□ -1.22
VARS-222ENST00000470953 PLIN1O60240 522 aa7.46□□□□□ -1.22
VARS-222ENST00000470953 TCP10Q12799 353 aa7.46□□□□□ -1.22
VARS-222ENST00000470953 NFIAQ12857 509 aa7.46□□□□□ -1.22
VARS-222ENST00000470953 CWF19L2Q2TBE0 894 aaKnown RBP7.46□□□□□ -1.22
VARS-222ENST00000470953 DUSP27Q5VZP5 1158 aa7.46□□□□□ -1.22
VARS-222ENST00000470953 UBE3BQ7Z3V4 1068 aa7.46□□□□□ -1.22
VARS-222ENST00000470953 SPRED2Q7Z698 418 aa7.46□□□□□ -1.22
VARS-222ENST00000470953 RNF135Q8IUD6 432 aa7.46□□□□□ -1.22
VARS-222ENST00000470953 ZFPM1Q8IX07 1006 aa7.46□□□□□ -1.22
VARS-222ENST00000470953 UPF3BQ9BZI7 483 aaKnown RBP7.46□□□□□ -1.22
VARS-222ENST00000470953 IQSEC3Q9UPP2 1182 aaPredicted RBP7.46□□□□□ -1.22
VARS-222ENST00000470953 AGTPBP1Q9UPW5 1226 aa7.46□□□□□ -1.22
VARS-222ENST00000470953 TRIM75PA6NK02 468 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 H3BQ06 376 aaPredicted RBP7.45□□□□□ -1.22
VARS-222ENST00000470953 H7C1W4 665 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 APBB1O00213 710 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 GALR2O43603 387 aaPredicted RBP7.45□□□□□ -1.22
VARS-222ENST00000470953 CSF1RP07333 972 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 RGS2P41220 211 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 GCLCP48506 637 aaPredicted RBP7.45□□□□□ -1.22
VARS-222ENST00000470953 COL9A3Q14050 684 aaPredicted RBP7.45□□□□□ -1.22
VARS-222ENST00000470953 FKBP1CQ5VVH2 108 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 OTOP2Q7RTS6 562 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 ADHFE1Q8IWW8 467 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 FAM151AQ8WW52 585 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 RUNDC1Q96C34 613 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 HOOK2Q96ED9 719 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 FAM84BQ96KN1 310 aaPredicted RBP7.45□□□□□ -1.22
VARS-222ENST00000470953 ZDHHC15Q96MV8 337 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 APBA2Q99767 749 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 PRKAG3Q9UGI9 489 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 TBX21Q9UL17 535 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 MAP3K2Q9Y2U5 619 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 SMG1Q96Q15 3661 aaKnown RBP7.45□□□□□ -1.22
VARS-222ENST00000470953 UTYO14607 1347 aa7.45□□□□□ -1.22
VARS-222ENST00000470953 FRYLO94915 3013 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 BPTFQ12830 3046 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 ZZEF1O43149 2961 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 HOXB7P09629 217 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 TMPOP42166 694 aaKnown RBP7.44□□□□□ -1.22
VARS-222ENST00000470953 LRRC41Q15345 812 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 MORN1Q5T089 497 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 MFSD14CQ5VZR4 134 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 SCYL3Q8IZE3 742 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 TEKT1Q969V4 418 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 TXNRD2Q9NNW7 524 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 MORF4L1Q9UBU8 362 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 PNMA3Q9UL41 463 aa7.44□□□□□ -1.22
VARS-222ENST00000470953 NEURL1BA8MQ27 555 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 ELL2O00472 640 aaPredicted RBP7.43□□□□□ -1.22
VARS-222ENST00000470953 HIBADHP31937 336 aaKnown RBP7.43□□□□□ -1.22
VARS-222ENST00000470953 CYP2C19P33261 490 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 CASP7P55210 303 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 HDLBPQ00341 1268 aaKnown RBP7.43□□□□□ -1.22
VARS-222ENST00000470953 CALD1Q05682 793 aaKnown RBP7.43□□□□□ -1.22
VARS-222ENST00000470953 CHAF1AQ13111 956 aaPredicted RBP7.43□□□□□ -1.22
VARS-222ENST00000470953 RSPO4Q2I0M5 234 aaPredicted RBP7.43□□□□□ -1.22
VARS-222ENST00000470953 PUS10Q3MIT2 529 aaKnown RBP7.43□□□□□ -1.22
VARS-222ENST00000470953 MCTP2Q6DN12 878 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 NEK9Q8TD19 979 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 GDPD5Q8WTR4 605 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 ZNF594Q96JF6 807 aaPredicted RBP7.43□□□□□ -1.22
VARS-222ENST00000470953 PLA2G12BQ9BX93 195 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 MTIF3Q9H2K0 278 aaKnown RBP7.43□□□□□ -1.22
VARS-222ENST00000470953 MRS2Q9HD23 443 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 IL23AQ9NPF7 189 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 TMOD2Q9NZR1 351 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 FAM198AQ9UFP1 575 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 PHF24Q9UPV7 400 aa7.43□□□□□ -1.22
VARS-222ENST00000470953 PI4KAP2A4QPH2 592 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 FGBP02675 491 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 CYBAP13498 195 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 ZXDAP98168 799 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 TAP1Q03518 808 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 MAP2K5Q13163 448 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 Q3C1V9 767 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 TMEM67Q5HYA8 995 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 CDC42EP5Q6NZY7 148 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 SH3BP5LQ7L8J4 393 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 ANKRD33Q7Z3H0 272 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 GPR142Q7Z601 462 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 CRACR2BQ8N4Y2 399 aaPredicted RBP7.42□□□□□ -1.22
VARS-222ENST00000470953 TMEM199Q8N511 208 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 PI4KAP1Q8N8J0 262 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 PPP1R12CQ9BZL4 782 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 ASCC2Q9H1I8 757 aaPredicted RBP7.42□□□□□ -1.22
VARS-222ENST00000470953 PORCNQ9H237 461 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 PICK1Q9NRD5 415 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 ADAMTS8Q9UP79 889 aa7.42□□□□□ -1.22
VARS-222ENST00000470953 FRYQ5TBA9 3013 aa7.41□□□□□ -1.22
VARS-222ENST00000470953 LOC285556D6RIA3 1793 aa7.41□□□□□ -1.22
VARS-222ENST00000470953 ANKRD18BA2A2Z9 1011 aa7.41□□□□□ -1.22
VARS-222ENST00000470953 DCDC2CA8MYV0 355 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms