RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 EVI5LQ96CN4 794 aa18.81■□□□□ 0.6
HDAC6-218ENST00000470942 SEC62Q99442 399 aaKnown RBP18.81■□□□□ 0.6
HDAC6-218ENST00000470942 ARPP21Q9UBL0 812 aaPredicted RBP18.81■□□□□ 0.6
HDAC6-218ENST00000470942 MINDY4BA8MYZ0 360 aa18.8■□□□□ 0.6
HDAC6-218ENST00000470942 HOXA7P31268 230 aaPredicted RBP18.8■□□□□ 0.6
HDAC6-218ENST00000470942 GCLCP48506 637 aaPredicted RBP18.8■□□□□ 0.6
HDAC6-218ENST00000470942 TDO2P48775 406 aa18.8■□□□□ 0.6
HDAC6-218ENST00000470942 USP14P54578 494 aa18.8■□□□□ 0.6
HDAC6-218ENST00000470942 PRMT2P55345 433 aa18.8■□□□□ 0.6
HDAC6-218ENST00000470942 ZMYM1Q5SVZ6 1142 aa18.8■□□□□ 0.6
HDAC6-218ENST00000470942 GIMAP6Q6P9H5 292 aa18.8■□□□□ 0.6
HDAC6-218ENST00000470942 C16orf86Q6ZW13 317 aa18.8■□□□□ 0.6
HDAC6-218ENST00000470942 STK11IPQ8N1F8 1099 aa18.8■□□□□ 0.6
HDAC6-218ENST00000470942 PATL2C9JE40 543 aaKnown RBP18.79■□□□□ 0.6
HDAC6-218ENST00000470942 AKR1B1P15121 316 aa18.79■□□□□ 0.6
HDAC6-218ENST00000470942 RGS19P49795 217 aa18.79■□□□□ 0.6
HDAC6-218ENST00000470942 NUCB1Q02818 461 aa18.79■□□□□ 0.6
HDAC6-218ENST00000470942 SLC9C1Q4G0N8 1177 aa18.79■□□□□ 0.6
HDAC6-218ENST00000470942 SBK1Q52WX2 424 aa18.79■□□□□ 0.6
HDAC6-218ENST00000470942 TMEM179Q6ZVK1 233 aa18.79■□□□□ 0.6
HDAC6-218ENST00000470942 P2RX7Q99572 595 aaKnown RBP18.79■□□□□ 0.6
HDAC6-218ENST00000470942 KIAA1683Q9H0B3 1180 aa18.79■□□□□ 0.6
HDAC6-218ENST00000470942 SRRDQ9UH36 339 aa18.79■□□□□ 0.6
HDAC6-218ENST00000470942 MYPNQ86TC9 1320 aa18.78■□□□□ 0.6
HDAC6-218ENST00000470942 TRIM6-TRIM34B2RNG4 842 aa18.78■□□□□ 0.6
HDAC6-218ENST00000470942 FAM110CQ1W6H9 321 aa18.78■□□□□ 0.6
HDAC6-218ENST00000470942 NBPF11Q86T75 865 aa18.78■□□□□ 0.6
HDAC6-218ENST00000470942 RAET1EQ8TD07 263 aa18.78■□□□□ 0.6
HDAC6-218ENST00000470942 CCDC17Q96LX7 622 aa18.78■□□□□ 0.6
HDAC6-218ENST00000470942 NACAP1Q9BZK3 213 aa18.78■□□□□ 0.6
HDAC6-218ENST00000470942 TNPO2O14787 897 aaKnown RBP18.77■□□□□ 0.6
HDAC6-218ENST00000470942 MLLT1Q03111 559 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-218ENST00000470942 IFNL3Q8IZI9 196 aa18.77■□□□□ 0.6
HDAC6-218ENST00000470942 RILPL2Q969X0 211 aa18.77■□□□□ 0.6
HDAC6-218ENST00000470942 ARMC5Q96C12 935 aa18.77■□□□□ 0.6
HDAC6-218ENST00000470942 C12orf42Q96LP6 360 aa18.77■□□□□ 0.6
HDAC6-218ENST00000470942 MKNK2Q9HBH9 465 aa18.77■□□□□ 0.6
HDAC6-218ENST00000470942 EPB41L4AQ9HCS5 686 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-218ENST00000470942 DOCK3Q8IZD9 2030 aa18.77■□□□□ 0.6
HDAC6-218ENST00000470942 USP17L15C9J2P7 530 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 USP17L13C9JLJ4 530 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 USP17L11C9JVI0 530 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 USP17L18D6R9N7 530 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 USP17L22D6RA61 530 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 USP17L17D6RBQ6 530 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 USP17L19D6RCP7 530 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 USP17L20D6RJB6 530 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 HERVK_113P62684 666 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 USP17L24Q0WX57 530 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 CCDC129Q6ZRS4 1044 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 PLEKHM2Q8IWE5 1019 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 SH3TC2Q8TF17 1288 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 ARHGEF10LQ9HCE6 1279 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 HTTP42858 3142 aa18.76■□□□□ 0.59
HDAC6-218ENST00000470942 A0A1W2PRG0 241 aa18.75■□□□□ 0.59
HDAC6-218ENST00000470942 VCAM1P19320 739 aa18.75■□□□□ 0.59
HDAC6-218ENST00000470942 ATP2B2Q01814 1243 aa18.75■□□□□ 0.59
HDAC6-218ENST00000470942 ICA1Q05084 483 aa18.75■□□□□ 0.59
HDAC6-218ENST00000470942 PRKCZQ05513 592 aa18.75■□□□□ 0.59
HDAC6-218ENST00000470942 CLEC10AQ8IUN9 316 aa18.75■□□□□ 0.59
HDAC6-218ENST00000470942 COA7Q96BR5 231 aa18.75■□□□□ 0.59
HDAC6-218ENST00000470942 NAPBQ9H115 298 aa18.75■□□□□ 0.59
HDAC6-218ENST00000470942 GABRQQ9UN88 632 aa18.75■□□□□ 0.59
HDAC6-218ENST00000470942 MYCP01106 439 aaPredicted RBP18.74■□□□□ 0.59
HDAC6-218ENST00000470942 CATSPERGQ6ZRH7 1159 aa18.74■□□□□ 0.59
HDAC6-218ENST00000470942 ZNF333Q96JL9 665 aa18.74■□□□□ 0.59
HDAC6-218ENST00000470942 PAGR1Q9BTK6 254 aa18.74■□□□□ 0.59
HDAC6-218ENST00000470942 TMEM106CQ9BVX2 250 aa18.74■□□□□ 0.59
HDAC6-218ENST00000470942 RPAP3Q9H6T3 665 aaPredicted RBP18.74■□□□□ 0.59
HDAC6-218ENST00000470942 SH2D4AQ9H788 454 aa18.74■□□□□ 0.59
HDAC6-218ENST00000470942 HELLSQ9NRZ9 838 aa18.74■□□□□ 0.59
HDAC6-218ENST00000470942 MORF4L1Q9UBU8 362 aa18.74■□□□□ 0.59
HDAC6-218ENST00000470942 PEX10O60683 326 aa18.73■□□□□ 0.59
HDAC6-218ENST00000470942 GRK4P32298 578 aa18.73■□□□□ 0.59
HDAC6-218ENST00000470942 GPRC5AQ8NFJ5 357 aa18.73■□□□□ 0.59
HDAC6-218ENST00000470942 GTF3C2Q8WUA4 911 aaPredicted RBP18.73■□□□□ 0.59
HDAC6-218ENST00000470942 OSBPL3Q9H4L5 887 aa18.73■□□□□ 0.59
HDAC6-218ENST00000470942 KANSL2Q9H9L4 492 aa18.73■□□□□ 0.59
HDAC6-218ENST00000470942 ZNF287Q9HBT7 754 aa18.73■□□□□ 0.59
HDAC6-218ENST00000470942 RBPJLQ9UBG7 517 aa18.73■□□□□ 0.59
HDAC6-218ENST00000470942 BIN2Q9UBW5 565 aaPredicted RBP18.73■□□□□ 0.59
HDAC6-218ENST00000470942 ROBO3Q96MS0 1386 aa18.72■□□□□ 0.59
HDAC6-218ENST00000470942 EEF2P13639 858 aaKnown RBP18.72■□□□□ 0.59
HDAC6-218ENST00000470942 RASA1P20936 1047 aa18.72■□□□□ 0.59
HDAC6-218ENST00000470942 FLT3LGP49771 235 aa18.72■□□□□ 0.59
HDAC6-218ENST00000470942 SIAH1Q8IUQ4 282 aa18.72■□□□□ 0.59
HDAC6-218ENST00000470942 CCAR1Q8IX12 1150 aaKnown RBP18.72■□□□□ 0.59
HDAC6-218ENST00000470942 ZNF444Q8N0Y2 327 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-218ENST00000470942 FAM227BQ96M60 508 aa18.72■□□□□ 0.59
HDAC6-218ENST00000470942 TXNRD2Q9NNW7 524 aa18.72■□□□□ 0.59
HDAC6-218ENST00000470942 TMX2Q9Y320 296 aa18.72■□□□□ 0.59
HDAC6-218ENST00000470942 KIAA0100Q14667 2235 aaKnown RBP18.72■□□□□ 0.59
HDAC6-218ENST00000470942 PRDM1O75626 825 aa18.71■□□□□ 0.59
HDAC6-218ENST00000470942 SLC3A2P08195 630 aaKnown RBP18.71■□□□□ 0.59
HDAC6-218ENST00000470942 ERVK-9P63128 1117 aa18.71■□□□□ 0.59
HDAC6-218ENST00000470942 ERVK-24P63145 666 aa18.71■□□□□ 0.59
HDAC6-218ENST00000470942 NMIQ13287 307 aaPredicted RBP18.71■□□□□ 0.59
HDAC6-218ENST00000470942 MCMDC2Q4G0Z9 681 aa18.71■□□□□ 0.59
HDAC6-218ENST00000470942 TICAM2Q86XR7 235 aa18.71■□□□□ 0.59
HDAC6-218ENST00000470942 TANGO6Q9C0B7 1094 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms