RNA–Protein interactions for RNA: ENST00000470819.2

CDKN2A-204, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-204ENST00000470819 HOXD11P31277 338 aaPredicted RBP17.2■□□□□ 0.34
CDKN2A-204ENST00000470819 GUCY1A2P33402 732 aa17.2■□□□□ 0.34
CDKN2A-204ENST00000470819 C12orf42Q96LP6 360 aa17.2■□□□□ 0.34
CDKN2A-204ENST00000470819 HAUS7Q99871 368 aa17.2■□□□□ 0.34
CDKN2A-204ENST00000470819 LRRCC1Q9C099 1032 aa17.2■□□□□ 0.34
CDKN2A-204ENST00000470819 COLQQ9Y215 455 aaPredicted RBP17.2■□□□□ 0.34
CDKN2A-204ENST00000470819 CDK5RAP2Q96SN8 1893 aa17.2■□□□□ 0.34
CDKN2A-204ENST00000470819 MGAMO43451 1857 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 USP17L15C9J2P7 530 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 USP17L13C9JLJ4 530 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 USP17L11C9JVI0 530 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 USP17L18D6R9N7 530 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 USP17L22D6RA61 530 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 USP17L17D6RBQ6 530 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 USP17L19D6RCP7 530 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 USP17L20D6RJB6 530 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 MBD4O95243 580 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 HMGCRP04035 888 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 ADD2P35612 726 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 USP14P54578 494 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 ERVK-9P63128 1117 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 ERVK-24P63145 666 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 USP17L24Q0WX57 530 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 SEPT2Q15019 361 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 KIAA1683Q9H0B3 1180 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 PORCNQ9H237 461 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 FOCADQ5VW36 1801 aa17.19■□□□□ 0.34
CDKN2A-204ENST00000470819 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
CDKN2A-204ENST00000470819 MAPK4P31152 587 aa17.18■□□□□ 0.34
CDKN2A-204ENST00000470819 CATSPERGQ6ZRH7 1159 aa17.18■□□□□ 0.34
CDKN2A-204ENST00000470819 CCAR1Q8IX12 1150 aaKnown RBP17.18■□□□□ 0.34
CDKN2A-204ENST00000470819 SLC44A5Q8NCS7 719 aa17.18■□□□□ 0.34
CDKN2A-204ENST00000470819 TRIB2Q92519 343 aa17.18■□□□□ 0.34
CDKN2A-204ENST00000470819 DYNLL2Q96FJ2 89 aa17.18■□□□□ 0.34
CDKN2A-204ENST00000470819 NUDT12Q9BQG2 462 aa17.18■□□□□ 0.34
CDKN2A-204ENST00000470819 HTATIP2Q9BUP3 242 aa17.18■□□□□ 0.34
CDKN2A-204ENST00000470819 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.18■□□□□ 0.34
CDKN2A-204ENST00000470819 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.18■□□□□ 0.34
CDKN2A-204ENST00000470819 MKI67P46013 3256 aaKnown RBP17.17■□□□□ 0.34
CDKN2A-204ENST00000470819 CNMDO75829 334 aa17.17■□□□□ 0.34
CDKN2A-204ENST00000470819 VCAM1P19320 739 aa17.17■□□□□ 0.34
CDKN2A-204ENST00000470819 GTF3C2Q8WUA4 911 aaPredicted RBP17.17■□□□□ 0.34
CDKN2A-204ENST00000470819 CRISPLD2Q9H0B8 497 aa17.17■□□□□ 0.34
CDKN2A-204ENST00000470819 RPTORQ8N122 1335 aa17.17■□□□□ 0.34
CDKN2A-204ENST00000470819 BRCA2P51587 3418 aa17.16■□□□□ 0.34
CDKN2A-204ENST00000470819 CYP2D7A0A087X1C5 515 aa17.16■□□□□ 0.34
CDKN2A-204ENST00000470819 A0A1W2PRG0 241 aa17.16■□□□□ 0.34
CDKN2A-204ENST00000470819 SMIM22K7EJ46 135 aa17.16■□□□□ 0.34
CDKN2A-204ENST00000470819 UBE3CQ15386 1083 aa17.16■□□□□ 0.34
CDKN2A-204ENST00000470819 GPR142Q7Z601 462 aa17.16■□□□□ 0.34
CDKN2A-204ENST00000470819 PLEKHH3Q7Z736 793 aa17.16■□□□□ 0.34
CDKN2A-204ENST00000470819 USP6NLQ92738 828 aa17.16■□□□□ 0.34
CDKN2A-204ENST00000470819 RPAP3Q9H6T3 665 aaPredicted RBP17.16■□□□□ 0.34
CDKN2A-204ENST00000470819 HMX1Q9NP08 348 aaPredicted RBP17.16■□□□□ 0.34
CDKN2A-204ENST00000470819 RABGAP1Q9Y3P9 1069 aa17.16■□□□□ 0.34
CDKN2A-204ENST00000470819 XRCC5P13010 732 aaKnown RBP17.15■□□□□ 0.34
CDKN2A-204ENST00000470819 MORN1Q5T089 497 aa17.15■□□□□ 0.34
CDKN2A-204ENST00000470819 DIS3LQ8TF46 1054 aaKnown RBP17.15■□□□□ 0.34
CDKN2A-204ENST00000470819 SOCS4Q8WXH5 440 aa17.15■□□□□ 0.34
CDKN2A-204ENST00000470819 PAWRQ96IZ0 340 aaKnown RBP17.15■□□□□ 0.34
CDKN2A-204ENST00000470819 ATP8A2Q9NTI2 1148 aa17.15■□□□□ 0.34
CDKN2A-204ENST00000470819 MYH1P12882 1939 aa17.15■□□□□ 0.34
CDKN2A-204ENST00000470819 USP17L12C9JPN9 530 aa17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 USP17L21D6R901 530 aa17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 PRKAR2AP13861 404 aaKnown RBP17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 CAPN2P17655 700 aa17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 CCL14Q16627 93 aa17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 C12orf60Q5U649 245 aa17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 CHRDL2Q6WN34 429 aa17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 PUS7LQ9H0K6 701 aaKnown RBP17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 DCTPP1Q9H773 170 aa17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 CWC22Q9HCG8 908 aaKnown RBP17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 ECHDC1Q9NTX5 307 aa17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 BTBD7Q9P203 1132 aa17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 SWAP70Q9UH65 585 aa17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
CDKN2A-204ENST00000470819 SPDYE16A6NNV3 312 aaPredicted RBP17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 AKR1B1P15121 316 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 RGS2P41220 211 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 CCNA1P78396 465 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 KIAA1755Q5JYT7 1200 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 MAP3K21Q5TCX8 1036 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 WDR78Q5VTH9 848 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 LBX2Q6XYB7 198 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 TMEM179Q6ZVK1 233 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 CLEC10AQ8IUN9 316 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 SIAH1Q8IUQ4 282 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 NR2E3Q9Y5X4 410 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 DOCK3Q8IZD9 2030 aa17.13■□□□□ 0.33
CDKN2A-204ENST00000470819 ZKSCAN1P17029 563 aaPredicted RBP17.12■□□□□ 0.33
CDKN2A-204ENST00000470819 CDK8P49336 464 aa17.12■□□□□ 0.33
CDKN2A-204ENST00000470819 FXR1P51114 621 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDKN2A-204ENST00000470819 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
CDKN2A-204ENST00000470819 CACNB2Q08289 660 aaPredicted RBP17.12■□□□□ 0.33
CDKN2A-204ENST00000470819 TSHZ3Q63HK5 1081 aa17.12■□□□□ 0.33
CDKN2A-204ENST00000470819 EVI5O60447 810 aa17.11■□□□□ 0.33
CDKN2A-204ENST00000470819 MNX1P50219 401 aaPredicted RBP17.11■□□□□ 0.33
CDKN2A-204ENST00000470819 MAP2K5Q13163 448 aa17.11■□□□□ 0.33
CDKN2A-204ENST00000470819 COG2Q14746 738 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms