RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 ECM29Q5VYK3 1845 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 BTBD18B2RXH4 712 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 C21orf2O43822 256 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 DPEP1P16444 411 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 CLCN1P35523 988 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 TFAP4Q01664 338 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 R3HDM1Q15032 1099 aaKnown RBP19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 ANO6Q4KMQ2 910 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 TMTC3Q6ZXV5 915 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 CTCFLQ8NI51 663 aaPredicted RBP19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 MKNK2Q9HBH9 465 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 ZNF287Q9HBT7 754 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 USP25Q9UHP3 1055 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 KCNJ14Q9UNX9 436 aa19.54■□□□□ 0.72
SMARCD3-206ENST00000470588 GAKO14976 1311 aa19.53■□□□□ 0.72
SMARCD3-206ENST00000470588 NAV1Q8NEY1 1877 aa19.53■□□□□ 0.72
SMARCD3-206ENST00000470588 A0A1B0GVL5 298 aa19.53■□□□□ 0.72
SMARCD3-206ENST00000470588 PKN1Q16512 942 aa19.53■□□□□ 0.72
SMARCD3-206ENST00000470588 ZNF444Q8N0Y2 327 aaPredicted RBP19.53■□□□□ 0.72
SMARCD3-206ENST00000470588 UPF1Q92900 1129 aaKnown RBP eCLIP19.53■□□□□ 0.72
SMARCD3-206ENST00000470588 V9GY48 417 aaPredicted RBP19.53■□□□□ 0.72
SMARCD3-206ENST00000470588 ADCY5O95622 1261 aa19.52■□□□□ 0.72
SMARCD3-206ENST00000470588 NDUFA8P51970 172 aa19.52■□□□□ 0.72
SMARCD3-206ENST00000470588 RILPL1Q5EBL4 403 aa19.52■□□□□ 0.72
SMARCD3-206ENST00000470588 TEX11Q8IYF3 940 aa19.52■□□□□ 0.72
SMARCD3-206ENST00000470588 DBNDD1Q9H9R9 158 aa19.52■□□□□ 0.72
SMARCD3-206ENST00000470588 ECE2O60344 883 aa19.52■□□□□ 0.71
SMARCD3-206ENST00000470588 NMT2O60551 498 aa19.52■□□□□ 0.71
SMARCD3-206ENST00000470588 CUTAO60888 179 aa19.52■□□□□ 0.71
SMARCD3-206ENST00000470588 KIF5BP33176 963 aa19.52■□□□□ 0.71
SMARCD3-206ENST00000470588 RCSD1Q6JBY9 416 aa19.52■□□□□ 0.71
SMARCD3-206ENST00000470588 DYNLL2Q96FJ2 89 aa19.52■□□□□ 0.71
SMARCD3-206ENST00000470588 SDF4Q9BRK5 362 aa19.52■□□□□ 0.71
SMARCD3-206ENST00000470588 CBX8Q9HC52 389 aa19.52■□□□□ 0.71
SMARCD3-206ENST00000470588 TAOK2Q9UL54 1235 aa19.52■□□□□ 0.71
SMARCD3-206ENST00000470588 NOL7Q9UMY1 257 aaKnown RBP19.52■□□□□ 0.71
SMARCD3-206ENST00000470588 FAM237AA0A1B0GTK4 181 aa19.51■□□□□ 0.71
SMARCD3-206ENST00000470588 WDHD1O75717 1129 aaPredicted RBP19.51■□□□□ 0.71
SMARCD3-206ENST00000470588 PLEKHA8P1O95397 391 aa19.51■□□□□ 0.71
SMARCD3-206ENST00000470588 FKBP1AP62942 108 aaKnown RBP19.51■□□□□ 0.71
SMARCD3-206ENST00000470588 KIAA2012Q0VF49 1180 aa19.51■□□□□ 0.71
SMARCD3-206ENST00000470588 MAPKAPK5Q8IW41 473 aa19.51■□□□□ 0.71
SMARCD3-206ENST00000470588 TIGD1Q96MW7 591 aa19.51■□□□□ 0.71
SMARCD3-206ENST00000470588 KAT14Q9H8E8 782 aa19.51■□□□□ 0.71
SMARCD3-206ENST00000470588 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
SMARCD3-206ENST00000470588 PPIP5K2O43314 1243 aa19.5■□□□□ 0.71
SMARCD3-206ENST00000470588 MARCKSP29966 332 aaPredicted RBP19.5■□□□□ 0.71
SMARCD3-206ENST00000470588 RHBDL3P58872 404 aa19.5■□□□□ 0.71
SMARCD3-206ENST00000470588 STX1AQ16623 288 aa19.5■□□□□ 0.71
SMARCD3-206ENST00000470588 PHF20Q9BVI0 1012 aa19.5■□□□□ 0.71
SMARCD3-206ENST00000470588 IL17RBQ9NRM6 502 aa19.5■□□□□ 0.71
SMARCD3-206ENST00000470588 SNED1Q8TER0 1413 aa19.5■□□□□ 0.71
SMARCD3-206ENST00000470588 ZNF202O95125 648 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 ZNF165P49910 485 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 TOB1P50616 345 aaPredicted RBP19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 PLCD1P51178 756 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 AOC3Q16853 763 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 STRIP1Q5VSL9 837 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 SRBD1Q8N5C6 995 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 PSMD1Q99460 953 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 ANO10Q9NW15 660 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 TTF2Q9UNY4 1162 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 PTMAP06454 111 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 TSPY3P0CV98 308 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 TSPY8P0CW00 308 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 GNAQP50148 359 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 SAP30BPQ9UHR5 308 aaKnown RBP19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 CEP131Q9UPN4 1083 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 HPSEQ9Y251 543 aa19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 MORC2Q9Y6X9 1032 aaPredicted RBP19.49■□□□□ 0.71
SMARCD3-206ENST00000470588 CDK5RAP2Q96SN8 1893 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 USP17L3A6NCW0 530 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 USP17L4A6NCW7 530 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 PFKFB1P16118 471 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 KCNA3P22001 575 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 MSNP26038 577 aaKnown RBP19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 KRT2P35908 639 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 C16orf86Q6ZW13 317 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 USP17L1Q7RTZ2 530 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 DNAJC25Q9H1X3 360 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 VPS33BQ9H267 617 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 BRMS1Q9HCU9 246 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 CNTNAP5Q8WYK1 1306 aa19.48■□□□□ 0.71
SMARCD3-206ENST00000470588 F8W031 263 aaPredicted RBP19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 RASA1P20936 1047 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 CDK8P49336 464 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 RESP18Q5W5W9 173 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 LUZP1Q86V48 1076 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 KRI1Q8N9T8 703 aaKnown RBP19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 VPS54Q9P1Q0 977 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 KIAA1468Q9P260 1216 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 MYH6P13533 1939 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 SYKP43405 635 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 NR5A1Q13285 461 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 SLC4A8Q2Y0W8 1093 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 DALRD3Q5D0E6 543 aaKnown RBP19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 SHC4Q6S5L8 630 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 CERS5Q8N5B7 392 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 PNMA1Q8ND90 353 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 OXER1Q8TDS5 423 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms