RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 PICALMQ13492 652 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 FKBP1CQ5VVH2 108 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 CCDC144CPQ8IYA2 1237 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 MTMR14Q8NCE2 650 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 PNMA1Q8ND90 353 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 NKX2-3Q8TAU0 364 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 DYNLL2Q96FJ2 89 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 MYL10Q9BUA6 226 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 BCS1LQ9Y276 419 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 GOLGA6L3A6NEY3 463 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 YDJCA8MPS7 323 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 MYO1BO43795 1136 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 YEATS4O95619 227 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 RPS12P25398 132 aaKnown RBP12.71□□□□□ -0.37
SND1-208ENST00000470463 U2AF2P26368 475 aaKnown RBP eCLIP12.71□□□□□ -0.377e-7■■□□□ 12.2
SND1-208ENST00000470463 ZNF445P59923 1031 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 FOXD4L6Q3SYB3 417 aaPredicted RBP12.71□□□□□ -0.37
SND1-208ENST00000470463 KRT40Q6A162 431 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 RCSD1Q6JBY9 416 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 CAVIN1Q6NZI2 390 aaKnown RBP12.71□□□□□ -0.37
SND1-208ENST00000470463 FOXD4L3Q6VB84 417 aaPredicted RBP12.71□□□□□ -0.37
SND1-208ENST00000470463 TMTC3Q6ZXV5 915 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 NBPF11Q86T75 865 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 RAB11FIP4Q86YS3 637 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 JMYQ8N9B5 988 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.37
SND1-208ENST00000470463 GPT2Q8TD30 523 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 KCNG4Q8TDN1 519 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 LEO1Q8WVC0 666 aaPredicted RBP12.71□□□□□ -0.37
SND1-208ENST00000470463 PHKBQ93100 1093 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 FOXP1Q9H334 677 aaPredicted RBP12.71□□□□□ -0.37
SND1-208ENST00000470463 IL17RBQ9NRM6 502 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 POLR3EQ9NVU0 708 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 RTEL1Q9NZ71 1219 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 RCOR1Q9UKL0 485 aa12.71□□□□□ -0.37
SND1-208ENST00000470463 ATRNL1Q5VV63 1379 aa12.7□□□□□ -0.38
SND1-208ENST00000470463 MMP1P03956 469 aa12.7□□□□□ -0.38
SND1-208ENST00000470463 DEKP35659 375 aaKnown RBP12.7□□□□□ -0.38
SND1-208ENST00000470463 KIF23Q02241 960 aaPredicted RBP12.7□□□□□ -0.38
SND1-208ENST00000470463 GRM4Q14833 912 aa12.7□□□□□ -0.38
SND1-208ENST00000470463 DLGAP5Q15398 846 aa12.7□□□□□ -0.38
SND1-208ENST00000470463 CFAP100Q494V2 611 aa12.7□□□□□ -0.38
SND1-208ENST00000470463 CCDC183Q5T5S1 534 aa12.7□□□□□ -0.38
SND1-208ENST00000470463 GMLQ99445 158 aa12.7□□□□□ -0.38
SND1-208ENST00000470463 MXD3Q9BW11 206 aa12.7□□□□□ -0.38
SND1-208ENST00000470463 GZF1Q9H116 711 aaPredicted RBP12.7□□□□□ -0.38
SND1-208ENST00000470463 SH3GLB2Q9NR46 395 aa12.7□□□□□ -0.38
SND1-208ENST00000470463 KCNQ5Q9NR82 932 aa12.7□□□□□ -0.38
SND1-208ENST00000470463 ZNF277Q9NRM2 450 aaPredicted RBP12.7□□□□□ -0.38
SND1-208ENST00000470463 SYNPO2Q9UMS6 1093 aa12.7□□□□□ -0.38
SND1-208ENST00000470463 ECM29Q5VYK3 1845 aa12.69□□□□□ -0.38
SND1-208ENST00000470463 hCG_1984214I3L0E3 225 aa12.69□□□□□ -0.38
SND1-208ENST00000470463 PSMD14O00487 310 aa12.69□□□□□ -0.38
SND1-208ENST00000470463 FSTL1Q12841 308 aa12.69□□□□□ -0.38
SND1-208ENST00000470463 RILPL1Q5EBL4 403 aa12.69□□□□□ -0.38
SND1-208ENST00000470463 MYSM1Q5VVJ2 828 aa12.69□□□□□ -0.38
SND1-208ENST00000470463 CIAPIN1Q6FI81 312 aa12.69□□□□□ -0.38
SND1-208ENST00000470463 GALNT17Q6IS24 598 aa12.69□□□□□ -0.38
SND1-208ENST00000470463 METTL16Q86W50 562 aaKnown RBP12.69□□□□□ -0.38
SND1-208ENST00000470463 ZNF713Q8N859 430 aaPredicted RBP12.69□□□□□ -0.38
SND1-208ENST00000470463 GDPD2Q9HCC8 539 aa12.69□□□□□ -0.38
SND1-208ENST00000470463 DDX4Q9NQI0 724 aaKnown RBP12.69□□□□□ -0.38
SND1-208ENST00000470463 STX8Q9UNK0 236 aa12.69□□□□□ -0.38
SND1-208ENST00000470463 ZNF646O15015 1829 aaPredicted RBP12.69□□□□□ -0.38
SND1-208ENST00000470463 SCN9AQ15858 1988 aa12.69□□□□□ -0.38
SND1-208ENST00000470463 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 SMIM22K7EJ46 135 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 TTLL1O95922 423 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 BMP15O95972 392 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 CALML3P27482 149 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 NASPP49321 788 aaPredicted RBP12.68□□□□□ -0.38
SND1-208ENST00000470463 MRE11P49959 708 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 GUCY1B3Q02153 619 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 FUT2Q10981 343 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 ZSCAN23Q3MJ62 389 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 ASPRV1Q53RT3 343 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 ZSCAN29Q8IWY8 852 aaPredicted RBP12.68□□□□□ -0.38
SND1-208ENST00000470463 CCDC148Q8NFR7 591 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 CCDC12Q8WUD4 166 aaPredicted RBP12.68□□□□□ -0.38
SND1-208ENST00000470463 KLRG1Q96E93 195 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 TMEM47Q9BQJ4 181 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 SPZ1Q9BXG8 430 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 DDX19AQ9NUU7 478 aaKnown RBP12.68□□□□□ -0.38
SND1-208ENST00000470463 MTMR4Q9NYA4 1195 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
SND1-208ENST00000470463 CEP131Q9UPN4 1083 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 TCHHQ07283 1943 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 BRCA1P38398 1863 aaKnown RBP12.68□□□□□ -0.38
SND1-208ENST00000470463 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
SND1-208ENST00000470463 CNTNAP5Q8WYK1 1306 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 IGKV6D-41A0A0C4DH26 115 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 NMT2O60551 498 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 RAD17O75943 681 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 PARP1P09874 1014 aaKnown RBP12.67□□□□□ -0.38
SND1-208ENST00000470463 SCG2P13521 617 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 SF3A1Q15459 793 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms