RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 KIAA1683Q9H0B3 1180 aa16.93■□□□□ 0.3
TOP3B-215ENST00000470338 HELLSQ9NRZ9 838 aa16.93■□□□□ 0.3
TOP3B-215ENST00000470338 GREB1LQ9C091 1923 aaPredicted RBP16.93■□□□□ 0.3
TOP3B-215ENST00000470338 ROBO3Q96MS0 1386 aa16.92■□□□□ 0.3
TOP3B-215ENST00000470338 CCDC85CA6NKD9 419 aa16.92■□□□□ 0.3
TOP3B-215ENST00000470338 TRIM6-TRIM34B2RNG4 842 aa16.92■□□□□ 0.3
TOP3B-215ENST00000470338 MPHOSPH10O00566 681 aaKnown RBP16.92■□□□□ 0.3
TOP3B-215ENST00000470338 GNRH1P01148 92 aa16.92■□□□□ 0.3
TOP3B-215ENST00000470338 APPP05067 770 aa16.92■□□□□ 0.3
TOP3B-215ENST00000470338 AKR1B1P15121 316 aa16.92■□□□□ 0.3
TOP3B-215ENST00000470338 OSBPP22059 807 aa16.92■□□□□ 0.3
TOP3B-215ENST00000470338 CTGFP29279 349 aa16.92■□□□□ 0.3
TOP3B-215ENST00000470338 SMCR8Q8TEV9 937 aaPredicted RBP16.92■□□□□ 0.3
TOP3B-215ENST00000470338 ASCC2Q9H1I8 757 aaPredicted RBP16.92■□□□□ 0.3
TOP3B-215ENST00000470338 MINDY4BA8MYZ0 360 aa16.91■□□□□ 0.3
TOP3B-215ENST00000470338 FOXP2O15409 715 aa16.91■□□□□ 0.3
TOP3B-215ENST00000470338 PDE4AP27815 886 aa16.91■□□□□ 0.3
TOP3B-215ENST00000470338 TDO2P48775 406 aa16.91■□□□□ 0.3
TOP3B-215ENST00000470338 USP14P54578 494 aa16.91■□□□□ 0.3
TOP3B-215ENST00000470338 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
TOP3B-215ENST00000470338 RILPL2Q969X0 211 aa16.91■□□□□ 0.3
TOP3B-215ENST00000470338 NACAP1Q9BZK3 213 aa16.91■□□□□ 0.3
TOP3B-215ENST00000470338 CENPFP49454 3210 aa16.9■□□□□ 0.3
TOP3B-215ENST00000470338 A0A1W2PRG0 241 aa16.9■□□□□ 0.3
TOP3B-215ENST00000470338 PSMC4P43686 418 aa16.9■□□□□ 0.3
TOP3B-215ENST00000470338 GCLCP48506 637 aaPredicted RBP16.9■□□□□ 0.3
TOP3B-215ENST00000470338 MCMDC2Q4G0Z9 681 aa16.9■□□□□ 0.3
TOP3B-215ENST00000470338 SIAH1Q8IUQ4 282 aa16.9■□□□□ 0.3
TOP3B-215ENST00000470338 TRIM47Q96LD4 638 aa16.9■□□□□ 0.3
TOP3B-215ENST00000470338 FAM227BQ96M60 508 aa16.9■□□□□ 0.3
TOP3B-215ENST00000470338 FEZ1Q99689 392 aa16.9■□□□□ 0.3
TOP3B-215ENST00000470338 A0A0D9SFI3 127 aa16.89■□□□□ 0.29
TOP3B-215ENST00000470338 RASA1P20936 1047 aa16.89■□□□□ 0.29
TOP3B-215ENST00000470338 NMIQ13287 307 aaPredicted RBP16.89■□□□□ 0.29
TOP3B-215ENST00000470338 ZYXQ15942 572 aaKnown RBP16.89■□□□□ 0.29
TOP3B-215ENST00000470338 FAM110CQ1W6H9 321 aa16.89■□□□□ 0.29
TOP3B-215ENST00000470338 ANKRD13CQ8N6S4 541 aa16.89■□□□□ 0.29
TOP3B-215ENST00000470338 P2RX7Q99572 595 aaKnown RBP16.89■□□□□ 0.29
TOP3B-215ENST00000470338 NAPBQ9H115 298 aa16.89■□□□□ 0.29
TOP3B-215ENST00000470338 SDSP20132 328 aa16.88■□□□□ 0.29
TOP3B-215ENST00000470338 PRMT2P55345 433 aa16.88■□□□□ 0.29
TOP3B-215ENST00000470338 IRX3P78415 501 aaPredicted RBP16.88■□□□□ 0.29
TOP3B-215ENST00000470338 ALX1Q15699 326 aa16.88■□□□□ 0.29
TOP3B-215ENST00000470338 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.88■□□□□ 0.29
TOP3B-215ENST00000470338 KANSL2Q9H9L4 492 aa16.88■□□□□ 0.29
TOP3B-215ENST00000470338 MKNK2Q9HBH9 465 aa16.88■□□□□ 0.29
TOP3B-215ENST00000470338 RLFQ13129 1914 aa16.88■□□□□ 0.29
TOP3B-215ENST00000470338 MYH4Q9Y623 1939 aa16.88■□□□□ 0.29
TOP3B-215ENST00000470338 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 FMNL1O95466 1100 aaPredicted RBP16.87■□□□□ 0.29
TOP3B-215ENST00000470338 VCAM1P19320 739 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 HOXD10P28358 340 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 FCGRTP55899 365 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 HERVK_113P62684 666 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 CATSPERGQ6ZRH7 1159 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 ZNF287Q9HBT7 754 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 ARHGEF10LQ9HCE6 1279 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 MORF4L1Q9UBU8 362 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 SRRDQ9UH36 339 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 TMX2Q9Y320 296 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 PTCH2Q9Y6C5 1203 aa16.87■□□□□ 0.29
TOP3B-215ENST00000470338 ICA1Q05084 483 aa16.86■□□□□ 0.29
TOP3B-215ENST00000470338 PPARAQ07869 468 aa16.86■□□□□ 0.29
TOP3B-215ENST00000470338 CLEC10AQ8IUN9 316 aa16.86■□□□□ 0.29
TOP3B-215ENST00000470338 STK11IPQ8N1F8 1099 aa16.86■□□□□ 0.29
TOP3B-215ENST00000470338 PARP14Q460N5 1801 aa16.86■□□□□ 0.29
TOP3B-215ENST00000470338 HIP1O00291 1037 aa16.85■□□□□ 0.29
TOP3B-215ENST00000470338 ECM2O94769 699 aaPredicted RBP16.85■□□□□ 0.29
TOP3B-215ENST00000470338 SLC3A2P08195 630 aaKnown RBP16.85■□□□□ 0.29
TOP3B-215ENST00000470338 HSPD1P10809 573 aaKnown RBP16.85■□□□□ 0.29
TOP3B-215ENST00000470338 EEF2P13639 858 aaKnown RBP16.85■□□□□ 0.29
TOP3B-215ENST00000470338 RGS19P49795 217 aa16.85■□□□□ 0.29
TOP3B-215ENST00000470338 KIAA1755Q5JYT7 1200 aa16.85■□□□□ 0.29
TOP3B-215ENST00000470338 TTC22Q5TAA0 569 aa16.85■□□□□ 0.29
TOP3B-215ENST00000470338 POTEEQ6S8J3 1075 aa16.85■□□□□ 0.29
TOP3B-215ENST00000470338 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
TOP3B-215ENST00000470338 ZNF444Q8N0Y2 327 aaPredicted RBP16.85■□□□□ 0.29
TOP3B-215ENST00000470338 GTF3C2Q8WUA4 911 aaPredicted RBP16.85■□□□□ 0.29
TOP3B-215ENST00000470338 ARMC5Q96C12 935 aa16.85■□□□□ 0.29
TOP3B-215ENST00000470338 SH2D4AQ9H788 454 aa16.85■□□□□ 0.29
TOP3B-215ENST00000470338 RBPJLQ9UBG7 517 aa16.85■□□□□ 0.29
TOP3B-215ENST00000470338 ANAPC4Q9UJX5 808 aa16.85■□□□□ 0.29
TOP3B-215ENST00000470338 IGKV6D-41A0A0C4DH26 115 aa16.84■□□□□ 0.29
TOP3B-215ENST00000470338 PRDM1O75626 825 aa16.84■□□□□ 0.29
TOP3B-215ENST00000470338 FGAP02671 866 aa16.84■□□□□ 0.29
TOP3B-215ENST00000470338 GSPT1P15170 499 aaKnown RBP16.84■□□□□ 0.29
TOP3B-215ENST00000470338 PDE4BQ07343 736 aa16.84■□□□□ 0.29
TOP3B-215ENST00000470338 LBX2Q6XYB7 198 aa16.84■□□□□ 0.29
TOP3B-215ENST00000470338 LPAR1Q92633 364 aa16.84■□□□□ 0.29
TOP3B-215ENST00000470338 RPAP3Q9H6T3 665 aaPredicted RBP16.84■□□□□ 0.29
TOP3B-215ENST00000470338 VCPKMTQ9H867 229 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms