RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ESYT1Q9BSJ8 1104 aa5.84□□□□□ -1.48
SF3B1-208ENST00000470268 RIPOR2Q9Y4F9 1068 aa5.84□□□□□ -1.48
SF3B1-208ENST00000470268 HRH3Q9Y5N1 445 aa5.84□□□□□ -1.48
SF3B1-208ENST00000470268 LAMB2P55268 1798 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 UTRNP46939 3433 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 ANKRD31Q8N7Z5 1873 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 WTIPA6NIX2 430 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-208ENST00000470268 A6NJY4 79 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 EYA2O00167 538 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 IL2RAP01589 272 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 HSP90B1P14625 803 aaKnown RBP5.83□□□□□ -1.48
SF3B1-208ENST00000470268 KCNA3P22001 575 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 POLD1P28340 1107 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 HOXA10P31260 410 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-208ENST00000470268 PODNQ7Z5L7 613 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 GCC1Q96CN9 775 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 ARHGEF10LQ9HCE6 1279 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 SCHIP1Q9P0W5 487 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-208ENST00000470268 SERTAD1Q9UHV2 236 aa5.83□□□□□ -1.48
SF3B1-208ENST00000470268 LRP5O75197 1615 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 A0A0G2JLW4 131 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 A0A1W2PRU2 124 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 SNAP23O00161 211 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 PDE6BP35913 854 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 RPS8P62241 208 aaKnown RBP5.82□□□□□ -1.48
SF3B1-208ENST00000470268 NUCB1Q02818 461 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 GRAPQ13588 217 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 LDHAL6AQ6ZMR3 332 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 DDX46Q7L014 1031 aaKnown RBP5.82□□□□□ -1.48
SF3B1-208ENST00000470268 C2CD5Q86YS7 1000 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 C16orf71Q8IYS4 520 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-208ENST00000470268 STAG2Q8N3U4 1231 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 VGLL2Q8N8G2 317 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 GRAPLQ8TC17 118 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-208ENST00000470268 RHPN1Q8TCX5 695 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 OTUD7AQ8TE49 926 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-208ENST00000470268 CNKSR1Q969H4 720 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 LNPKQ9C0E8 428 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 SPON1Q9HCB6 807 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 IL1RAPL2Q9NP60 686 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 CDK2AP1O14519 115 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 CIAO1O76071 339 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 BCRP11274 1271 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 DPEP1P16444 411 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 TFCP2Q12800 502 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 G3BP1Q13283 466 aaKnown RBP eCLIP5.82□□□□□ -1.489e-7■□□□□ 8
SF3B1-208ENST00000470268 TAF7LQ5H9L4 462 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 ANKRD45Q5TZF3 282 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 OLFM4Q6UX06 510 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 ANKRD18AQ8IVF6 992 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 SCG3Q8WXD2 468 aaKnown RBP5.82□□□□□ -1.48
SF3B1-208ENST00000470268 RPGRQ92834 1020 aaKnown RBP5.82□□□□□ -1.48
SF3B1-208ENST00000470268 MASTLQ96GX5 879 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 CDC5LQ99459 802 aaKnown RBP5.82□□□□□ -1.48
SF3B1-208ENST00000470268 TSPAN10Q9H1Z9 355 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-208ENST00000470268 RAB6BQ9NRW1 208 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 BSDC1Q9NW68 430 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-208ENST00000470268 EGFL7Q9UHF1 273 aa5.82□□□□□ -1.48
SF3B1-208ENST00000470268 COL11A2P13942 1736 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-208ENST00000470268 TAF1P21675 1872 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 H0YIN7 160 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 C21orf2O43822 256 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 LGR5O75473 907 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 TAF5LO75529 589 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 NPR1P16066 1061 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 IGHMBP2P38935 993 aaKnown RBP5.81□□□□□ -1.48
SF3B1-208ENST00000470268 IL15P40933 162 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-208ENST00000470268 CHRNDQ07001 517 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 CHD1LQ86WJ1 897 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 NLGN2Q8NFZ4 835 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 ZNF622Q969S3 477 aaKnown RBP eCLIP5.81□□□□□ -1.482e-16■□□□□ 9.4
SF3B1-208ENST00000470268 EAF2Q96CJ1 260 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-208ENST00000470268 ZNF837Q96EG3 531 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-208ENST00000470268 KIF1BPQ96EK5 621 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 RBM17Q96I25 401 aaKnown RBP5.81□□□□□ -1.48
SF3B1-208ENST00000470268 TRERF1Q96PN7 1200 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 CRAMP1Q96RY5 1269 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 MPHOSPH8Q99549 860 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 LRRCC1Q9C099 1032 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 CNNM1Q9NRU3 951 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 CUEDC1Q9NWM3 386 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-208ENST00000470268 PPP1R1BQ9UD71 204 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-208ENST00000470268 WWC3Q9ULE0 1092 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 MINPP1Q9UNW1 487 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 NSFL1CQ9UNZ2 370 aaKnown RBP5.81□□□□□ -1.48
SF3B1-208ENST00000470268 RAB11FIP3O75154 756 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 SCNN1AP37088 669 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 MFAP1P55081 439 aaKnown RBP5.81□□□□□ -1.48
SF3B1-208ENST00000470268 TIMM10P62072 90 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 OS9Q13438 667 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-208ENST00000470268 HSP90AB4PQ58FF6 505 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 NEDD1Q8NHV4 660 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 TLR7Q9NYK1 1049 aaKnown RBP5.81□□□□□ -1.48
SF3B1-208ENST00000470268 CD2APQ9Y5K6 639 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 MYH3P11055 1940 aa5.81□□□□□ -1.48
SF3B1-208ENST00000470268 SALL3Q9BXA9 1300 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 SOWAHDA6NJG2 315 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 BBOX1O75936 387 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 PDE8BO95263 885 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 FGFR2P21802 821 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms