RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SGMS1Q86VZ5 419 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 DGKHQ86XP1 1220 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 SCYL3Q8IZE3 742 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 IL27Q8NEV9 243 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 RBM46Q8TBY0 533 aaKnown RBP13.24□□□□□ -0.29
SREBF1-209ENST00000470247 SNX21Q969T3 373 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 KANSL2Q9H9L4 492 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 GINM1Q9NU53 330 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 BRPF3Q9ULD4 1205 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 TPCN1Q9ULQ1 816 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 ANGEL1Q9UNK9 670 aaKnown RBP13.24□□□□□ -0.29
SREBF1-209ENST00000470247 A0A1W2PRG0 241 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 UBE2Q2LH0YL09 131 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
SREBF1-209ENST00000470247 ASNSP08243 561 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 EEF2P13639 858 aaKnown RBP13.23□□□□□ -0.29
SREBF1-209ENST00000470247 NF2P35240 595 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 CCDC178Q5BJE1 867 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 SMC1BQ8NDV3 1235 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 BRF1Q92994 677 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 MKL1Q969V6 931 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 UBAC1Q9BSL1 405 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 CABP5Q9NP86 173 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 NYAP2Q9P242 653 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 SNCAIPQ9Y6H5 919 aa13.23□□□□□ -0.29
SREBF1-209ENST00000470247 PAPPA2Q9BXP8 1791 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 CELF2O95319 508 aaKnown RBP13.22□□□□□ -0.29
SREBF1-209ENST00000470247 LARGE1O95461 756 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 PTPRAP18433 802 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 IREB2P48200 963 aaKnown RBP13.22□□□□□ -0.29
SREBF1-209ENST00000470247 APOBRQ0VD83 1088 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 VGLL4Q14135 290 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 WTAPQ15007 396 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 RAB3GAP1Q15042 981 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 ARMC9Q7Z3E5 817 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 ACER1Q8TDN7 264 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 CLMNQ96JQ2 1002 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 TMEM47Q9BQJ4 181 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 ZNF408Q9H9D4 720 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 GBA2Q9HCG7 927 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-209ENST00000470247 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
SREBF1-209ENST00000470247 MYH8P13535 1937 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 ST18O60284 1047 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 TTLL1O95922 423 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 TOP1P11387 765 aaKnown RBP13.21□□□□□ -0.29
SREBF1-209ENST00000470247 FKBP1BP68106 108 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 ICA1Q05084 483 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 ST3GAL1Q11201 340 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 TROAPQ12815 778 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 SART3Q15020 963 aaKnown RBP13.21□□□□□ -0.29
SREBF1-209ENST00000470247 ME3Q16798 604 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 IFIT1BQ5T764 474 aaKnown RBP13.21□□□□□ -0.29
SREBF1-209ENST00000470247 ANKRD13AQ8IZ07 590 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 TMTC2Q8N394 836 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 TBC1D2Q9BYX2 928 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 STX8Q9UNK0 236 aa13.21□□□□□ -0.29
SREBF1-209ENST00000470247 ERICH2A1L162 156 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 UNCXA6NJT0 531 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 USP17L5A8MUK1 530 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
SREBF1-209ENST00000470247 ECE1P42892 770 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 TTLL12Q14166 644 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-209ENST00000470247 ANKRD1Q15327 319 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 KIAA1755Q5JYT7 1200 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 APOA5Q6Q788 366 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 NOL8Q76FK4 1167 aaKnown RBP13.2□□□□□ -0.3
SREBF1-209ENST00000470247 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 ZNF274Q96GC6 653 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-209ENST00000470247 MYL10Q9BUA6 226 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 WDR18Q9BV38 432 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 FAM217BQ9NTX9 383 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-209ENST00000470247 LIMCH1Q9UPQ0 1083 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 TMX2Q9Y320 296 aa13.2□□□□□ -0.3
SREBF1-209ENST00000470247 KLF18A0A0U1RQI7 1052 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 GJA5P36382 358 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 MCM2P49736 904 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 FGD1P98174 961 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 FSTL1Q12841 308 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 RASGRP2Q7LDG7 609 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 LRRC47Q8N1G4 583 aaKnown RBP13.19□□□□□ -0.3
SREBF1-209ENST00000470247 C2orf69Q8N8R5 385 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 TMX3Q96JJ7 454 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 PICK1Q9NRD5 415 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 AFG3L2Q9Y4W6 797 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 ZHX2Q9Y6X8 837 aa13.19□□□□□ -0.3
SREBF1-209ENST00000470247 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 PFKFB2O60825 505 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 RXRAP19793 462 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 ATP2B2Q01814 1243 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 SPP2Q13103 211 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 PPP4R3BQ5MIZ7 849 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 ERO1BQ86YB8 467 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 KAT14Q9H8E8 782 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 ELP3Q9H9T3 547 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms