RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 POLR2BP30876 1174 aaKnown RBP6.26□□□□□ -1.41
SRRM1-208ENST00000470243 ASPAP45381 313 aa6.26□□□□□ -1.41
SRRM1-208ENST00000470243 IREB2P48200 963 aaKnown RBP6.26□□□□□ -1.41
SRRM1-208ENST00000470243 MLECQ14165 292 aa6.26□□□□□ -1.41
SRRM1-208ENST00000470243 ZYXQ15942 572 aaKnown RBP6.26□□□□□ -1.41
SRRM1-208ENST00000470243 LRRFIP1Q32MZ4 808 aaKnown RBP6.26□□□□□ -1.41
SRRM1-208ENST00000470243 LARP1BQ659C4 914 aaKnown RBP6.26□□□□□ -1.41
SRRM1-208ENST00000470243 NLRC3Q7RTR2 1065 aa6.26□□□□□ -1.41
SRRM1-208ENST00000470243 ATG4CQ96DT6 458 aa6.26□□□□□ -1.41
SRRM1-208ENST00000470243 TM9SF2Q99805 663 aa6.26□□□□□ -1.41
SRRM1-208ENST00000470243 A0A1W2PQH9 124 aa6.25□□□□□ -1.41
SRRM1-208ENST00000470243 B2RBV5 119 aa6.25□□□□□ -1.41
SRRM1-208ENST00000470243 GAS2O43903 313 aaKnown RBP6.25□□□□□ -1.41
SRRM1-208ENST00000470243 NME1P15531 152 aaKnown RBP6.25□□□□□ -1.41
SRRM1-208ENST00000470243 GIMAP6Q6P9H5 292 aa6.25□□□□□ -1.41
SRRM1-208ENST00000470243 TTC6Q86TZ1 520 aa6.25□□□□□ -1.41
SRRM1-208ENST00000470243 HID1Q8IV36 788 aa6.25□□□□□ -1.41
SRRM1-208ENST00000470243 C19orf47Q8N9M1 422 aaKnown RBP6.25□□□□□ -1.41
SRRM1-208ENST00000470243 ZNF507Q8TCN5 953 aa6.25□□□□□ -1.41
SRRM1-208ENST00000470243 MICAL1Q8TDZ2 1067 aa6.25□□□□□ -1.41
SRRM1-208ENST00000470243 WFDC12Q8WWY7 111 aa6.25□□□□□ -1.41
SRRM1-208ENST00000470243 UBL7Q96S82 380 aaPredicted RBP6.25□□□□□ -1.41
SRRM1-208ENST00000470243 CNNM2Q9H8M5 875 aa6.25□□□□□ -1.41
SRRM1-208ENST00000470243 ST7Q9NRC1 585 aa6.25□□□□□ -1.41
SRRM1-208ENST00000470243 CCDC85CA6NKD9 419 aa6.24□□□□□ -1.41
SRRM1-208ENST00000470243 U2SURPO15042 1029 aaKnown RBP6.24□□□□□ -1.41
SRRM1-208ENST00000470243 SART1O43290 800 aaKnown RBP6.24□□□□□ -1.41
SRRM1-208ENST00000470243 CASP7P55210 303 aa6.24□□□□□ -1.41
SRRM1-208ENST00000470243 SLBPQ14493 270 aaKnown RBP eCLIP6.24□□□□□ -1.41
SRRM1-208ENST00000470243 DDR2Q16832 855 aa6.24□□□□□ -1.41
SRRM1-208ENST00000470243 SGO2Q562F6 1265 aa6.24□□□□□ -1.41
SRRM1-208ENST00000470243 PRAMEF13Q5VWM6 474 aa6.24□□□□□ -1.41
SRRM1-208ENST00000470243 MCTP1Q6DN14 999 aa6.24□□□□□ -1.41
SRRM1-208ENST00000470243 CDC37L1Q7L3B6 337 aa6.24□□□□□ -1.41
SRRM1-208ENST00000470243 MCATQ8IVS2 390 aaKnown RBP6.24□□□□□ -1.41
SRRM1-208ENST00000470243 MRPL41Q8IXM3 137 aaKnown RBP6.24□□□□□ -1.41
SRRM1-208ENST00000470243 SMYD4Q8IYR2 804 aaPredicted RBP6.24□□□□□ -1.41
SRRM1-208ENST00000470243 TAB3Q8N5C8 712 aaPredicted RBP6.24□□□□□ -1.41
SRRM1-208ENST00000470243 MEGF10Q96KG7 1140 aa6.24□□□□□ -1.41
SRRM1-208ENST00000470243 SLC9A7Q96T83 725 aa6.24□□□□□ -1.41
SRRM1-208ENST00000470243 CEP41Q9BYV8 373 aa6.24□□□□□ -1.41
SRRM1-208ENST00000470243 SIRPGQ9P1W8 387 aa6.24□□□□□ -1.41
SRRM1-208ENST00000470243 TNFRSF10CO14798 259 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 SMARCA5O60264 1052 aaPredicted RBP6.23□□□□□ -1.41
SRRM1-208ENST00000470243 RAG1P15918 1043 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 YARSP54577 528 aaKnown RBP6.23□□□□□ -1.41
SRRM1-208ENST00000470243 RASA3Q14644 834 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 CDCP2Q5VXM1 449 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 CDPF1Q6NVV7 123 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.23□□□□□ -1.41
SRRM1-208ENST00000470243 PHACTR4Q8IZ21 702 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 XAGE3Q8WTP9 111 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 FAM46AQ96IP4 442 aaKnown RBP6.23□□□□□ -1.41
SRRM1-208ENST00000470243 ACSS3Q9H6R3 686 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 LGR6Q9HBX8 967 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 SSU72Q9NP77 194 aaKnown RBP6.23□□□□□ -1.41
SRRM1-208ENST00000470243 SNTG2Q9NY99 539 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 CDK11AQ9UQ88 783 aaPredicted RBP6.23□□□□□ -1.41
SRRM1-208ENST00000470243 MAPK8IP1Q9UQF2 711 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 DAGLAQ9Y4D2 1042 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 LTBP3Q9NS15 1303 aa6.23□□□□□ -1.41
SRRM1-208ENST00000470243 LMTK3Q96Q04 1460 aa6.22□□□□□ -1.41
SRRM1-208ENST00000470243 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.22□□□□□ -1.41
SRRM1-208ENST00000470243 USP11P51784 963 aa6.22□□□□□ -1.41
SRRM1-208ENST00000470243 SLC6A19Q695T7 634 aa6.22□□□□□ -1.41
SRRM1-208ENST00000470243 C6orf15Q6UXA7 325 aaPredicted RBP6.22□□□□□ -1.41
SRRM1-208ENST00000470243 UNC5AQ6ZN44 842 aa6.22□□□□□ -1.41
SRRM1-208ENST00000470243 ARMCX6Q7L4S7 300 aa6.22□□□□□ -1.41
SRRM1-208ENST00000470243 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.22□□□□□ -1.41
SRRM1-208ENST00000470243 SLFN12Q8IYM2 578 aa6.22□□□□□ -1.41
SRRM1-208ENST00000470243 FBLIM1Q8WUP2 373 aa6.22□□□□□ -1.41
SRRM1-208ENST00000470243 DEPDC7Q96QD5 511 aa6.22□□□□□ -1.41
SRRM1-208ENST00000470243 SRPK1Q96SB4 655 aaKnown RBP6.22□□□□□ -1.41
SRRM1-208ENST00000470243 KIF2CQ99661 725 aa6.22□□□□□ -1.41
SRRM1-208ENST00000470243 SSBP4Q9BWG4 385 aaPredicted RBP6.22□□□□□ -1.41
SRRM1-208ENST00000470243 SEMA6CQ9H3T2 930 aa6.22□□□□□ -1.41
SRRM1-208ENST00000470243 PCDHB10Q9UN67 800 aa6.22□□□□□ -1.41
SRRM1-208ENST00000470243 FAM221BA6H8Z2 402 aa6.21□□□□□ -1.42
SRRM1-208ENST00000470243 DYNC1LI2O43237 492 aaPredicted RBP6.21□□□□□ -1.42
SRRM1-208ENST00000470243 GJB6O95452 261 aa6.21□□□□□ -1.42
SRRM1-208ENST00000470243 CST3P01034 146 aaPredicted RBP6.21□□□□□ -1.42
SRRM1-208ENST00000470243 NFE2L2Q16236 605 aa6.21□□□□□ -1.42
SRRM1-208ENST00000470243 FXNQ16595 210 aa6.21□□□□□ -1.42
SRRM1-208ENST00000470243 NOP9Q86U38 636 aaKnown RBP6.21□□□□□ -1.42
SRRM1-208ENST00000470243 ARMC10Q8N2F6 343 aa6.21□□□□□ -1.42
SRRM1-208ENST00000470243 KCT2Q8NC54 265 aa6.21□□□□□ -1.42
SRRM1-208ENST00000470243 CYB5D2Q8WUJ1 264 aa6.21□□□□□ -1.42
SRRM1-208ENST00000470243 UTP4Q969X6 686 aaKnown RBP6.21□□□□□ -1.42
SRRM1-208ENST00000470243 MSRB2Q9Y3D2 182 aa6.21□□□□□ -1.42
SRRM1-208ENST00000470243 IFT140Q96RY7 1462 aa6.21□□□□□ -1.42
SRRM1-208ENST00000470243 MROH2BQ7Z745 1585 aa6.2□□□□□ -1.42
SRRM1-208ENST00000470243 DDAH1O94760 285 aa6.2□□□□□ -1.42
SRRM1-208ENST00000470243 UBOX5O94941 541 aa6.2□□□□□ -1.42
SRRM1-208ENST00000470243 NFICP08651 508 aa6.2□□□□□ -1.42
SRRM1-208ENST00000470243 CAP2P40123 477 aa6.2□□□□□ -1.42
SRRM1-208ENST00000470243 MRM1Q6IN84 353 aaKnown RBP6.2□□□□□ -1.42
SRRM1-208ENST00000470243 JAZF1Q86VZ6 243 aa6.2□□□□□ -1.42
SRRM1-208ENST00000470243 BAHD1Q8TBE0 780 aaPredicted RBP6.2□□□□□ -1.42
SRRM1-208ENST00000470243 MKL1Q969V6 931 aa6.2□□□□□ -1.42
SRRM1-208ENST00000470243 MRFAP1L1Q96HT8 127 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms