RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 BIN2Q9UBW5 565 aaPredicted RBP11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 SLC45A1Q9Y2W3 748 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 SZT2Q5T011 3432 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 SALL3Q9BXA9 1300 aa11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 TNPO2O14787 897 aaKnown RBP11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 RNF113AO15541 343 aaKnown RBP11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 PRDM1O75626 825 aa11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 HOXA7P31268 230 aaPredicted RBP11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 FCGRTP55899 365 aa11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 UBE3CQ15386 1083 aa11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 SAMD1Q6SPF0 538 aaPredicted RBP11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 CATSPERGQ6ZRH7 1159 aa11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 TTC6Q86TZ1 520 aa11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 EHD4Q9H223 541 aa11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 FBXO28Q9NVF7 368 aa11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 FLRT1Q9NZU1 646 aa11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 SUPT16HQ9Y5B9 1047 aaKnown RBP11.13□□□□□ -0.63
SHROOM3-203ENST00000469923 DNAH12Q6ZR08 3092 aa11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 MINDY4BA8MYZ0 360 aa11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 INHAP05111 366 aa11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 VCAM1P19320 739 aa11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 VPS53Q5VIR6 699 aa11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 KBTBD3Q8NAB2 608 aa11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 DIS3LQ8TF46 1054 aaKnown RBP11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 NUP88Q99567 741 aaPredicted RBP11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 RNF208Q9H0X6 261 aa11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 RPAP3Q9H6T3 665 aaPredicted RBP11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 AS3MTQ9HBK9 375 aa11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 TMOD4Q9NZQ9 345 aa11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 FOCADQ5VW36 1801 aa11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 ATAD5Q96QE3 1844 aa11.12□□□□□ -0.63
SHROOM3-203ENST00000469923 BAZ2AQ9UIF9 1905 aaKnown RBP11.11□□□□□ -0.63
SHROOM3-203ENST00000469923 C19orf81C9J6K1 198 aa11.11□□□□□ -0.63
SHROOM3-203ENST00000469923 IRX3P78415 501 aaPredicted RBP11.11□□□□□ -0.63
SHROOM3-203ENST00000469923 USP6NLQ92738 828 aa11.11□□□□□ -0.63
SHROOM3-203ENST00000469923 TMEM106CQ9BVX2 250 aa11.11□□□□□ -0.63
SHROOM3-203ENST00000469923 MORF4L1Q9UBU8 362 aa11.11□□□□□ -0.63
SHROOM3-203ENST00000469923 TRIOBPQ9H2D6 2365 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 RBAK-RBAKDNI3L0D1 243 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 EEF2P13639 858 aaKnown RBP11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 ERVK-9P63128 1117 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 ERVK-24P63145 666 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 ATP2B2Q01814 1243 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 FAM110CQ1W6H9 321 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 FAM47AQ5JRC9 791 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 RASGRP2Q7LDG7 609 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 UBE2Q1Q7Z7E8 422 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 NBPF11Q86T75 865 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 GPRC5AQ8NFJ5 357 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 TRIB2Q92519 343 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 DEFB118Q96PH6 123 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 FEZ1Q99689 392 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 LNPKQ9C0E8 428 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 KIAA1683Q9H0B3 1180 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 MAST2Q6P0Q8 1798 aa11.1□□□□□ -0.63
SHROOM3-203ENST00000469923 USP17L15C9J2P7 530 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 USP17L13C9JLJ4 530 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 USP17L11C9JVI0 530 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 USP17L18D6R9N7 530 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 USP17L22D6RA61 530 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 USP17L17D6RBQ6 530 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 USP17L19D6RCP7 530 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 USP17L20D6RJB6 530 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 H0YGN5 161 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 GPAA1O43292 621 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 RASA1P20936 1047 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 HOXD10P28358 340 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 CCND3P30281 292 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 CTDSPL2Q05D32 466 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 USP17L24Q0WX57 530 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 ZMYM1Q5SVZ6 1142 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 MORN1Q5T089 497 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 C16orf86Q6ZW13 317 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 SKAP1Q86WV1 359 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 IFNL3Q8IZI9 196 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 TRPV1Q8NER1 839 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 NPLOC4Q8TAT6 608 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 ATG4CQ96DT6 458 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 C12orf42Q96LP6 360 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 FAM227BQ96M60 508 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 CABP5Q9NP86 173 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 ATP8A2Q9NTI2 1148 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 PLXNB2O15031 1838 aa11.09□□□□□ -0.63
SHROOM3-203ENST00000469923 MGAMO43451 1857 aa11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 NMT2O60551 498 aa11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 GNRH1P01148 92 aa11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 TFRCP02786 760 aaKnown RBP11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 GJB1P08034 283 aa11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 TAL1P17542 331 aaPredicted RBP11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 MX1P20591 662 aa11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 GCLCP48506 637 aaPredicted RBP11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 PDE1AP54750 535 aa11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 ARHGEF6Q15052 776 aa11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 PRAMEF19Q5SWL8 479 aa11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 GPR142Q7Z601 462 aa11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 U2AF1L4Q8WU68 220 aaKnown RBP11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 APPBP2Q92624 585 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms