RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 USP17L2Q6R6M4 530 aa16.36■□□□□ 0.21
EFNA1-203ENST00000469878 CLEC10AQ8IUN9 316 aa16.36■□□□□ 0.21
EFNA1-203ENST00000469878 TRIB2Q92519 343 aa16.36■□□□□ 0.21
EFNA1-203ENST00000469878 DYNLL2Q96FJ2 89 aa16.36■□□□□ 0.21
EFNA1-203ENST00000469878 DEFB118Q96PH6 123 aa16.36■□□□□ 0.21
EFNA1-203ENST00000469878 HAUS7Q99871 368 aa16.36■□□□□ 0.21
EFNA1-203ENST00000469878 PORCNQ9H237 461 aa16.36■□□□□ 0.21
EFNA1-203ENST00000469878 PAK6Q9NQU5 681 aaPredicted RBP16.36■□□□□ 0.21
EFNA1-203ENST00000469878 CNMDO75829 334 aa16.35■□□□□ 0.21
EFNA1-203ENST00000469878 SGPL1O95470 568 aa16.35■□□□□ 0.21
EFNA1-203ENST00000469878 VCAM1P19320 739 aa16.35■□□□□ 0.21
EFNA1-203ENST00000469878 HABP4Q5JVS0 413 aaKnown RBP16.35■□□□□ 0.21
EFNA1-203ENST00000469878 TSHZ3Q63HK5 1081 aa16.35■□□□□ 0.21
EFNA1-203ENST00000469878 TMED8Q6PL24 325 aaPredicted RBP16.35■□□□□ 0.21
EFNA1-203ENST00000469878 NKX2-3Q8TAU0 364 aa16.35■□□□□ 0.21
EFNA1-203ENST00000469878 C12orf42Q96LP6 360 aa16.35■□□□□ 0.21
EFNA1-203ENST00000469878 LRRCC1Q9C099 1032 aa16.35■□□□□ 0.21
EFNA1-203ENST00000469878 A0A1W2PRG0 241 aa16.34■□□□□ 0.21
EFNA1-203ENST00000469878 FARP2O94887 1054 aaPredicted RBP16.34■□□□□ 0.21
EFNA1-203ENST00000469878 CYP2B6P20813 491 aa16.34■□□□□ 0.21
EFNA1-203ENST00000469878 ERVK-9P63128 1117 aa16.34■□□□□ 0.21
EFNA1-203ENST00000469878 ERVK-24P63145 666 aa16.34■□□□□ 0.21
EFNA1-203ENST00000469878 GPRC5AQ8NFJ5 357 aa16.34■□□□□ 0.21
EFNA1-203ENST00000469878 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.34■□□□□ 0.212e-6■■□□□ 12.8
EFNA1-203ENST00000469878 COLQQ9Y215 455 aaPredicted RBP16.34■□□□□ 0.21
EFNA1-203ENST00000469878 CEP290O15078 2479 aa16.34■□□□□ 0.21
EFNA1-203ENST00000469878 RLFQ13129 1914 aa16.33■□□□□ 0.21
EFNA1-203ENST00000469878 MPHOSPH10O00566 681 aaKnown RBP16.33■□□□□ 0.2
EFNA1-203ENST00000469878 HMGCRP04035 888 aa16.33■□□□□ 0.2
EFNA1-203ENST00000469878 DIS3LQ8TF46 1054 aaKnown RBP16.33■□□□□ 0.2
EFNA1-203ENST00000469878 KIAA1683Q9H0B3 1180 aa16.33■□□□□ 0.2
EFNA1-203ENST00000469878 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.2
EFNA1-203ENST00000469878 A0A0G2JMZ2 1700 aa16.33■□□□□ 0.2
EFNA1-203ENST00000469878 AKR1B1P15121 316 aa16.32■□□□□ 0.2
EFNA1-203ENST00000469878 CCL14Q16627 93 aa16.32■□□□□ 0.2
EFNA1-203ENST00000469878 KIAA1755Q5JYT7 1200 aa16.32■□□□□ 0.2
EFNA1-203ENST00000469878 GPR142Q7Z601 462 aa16.32■□□□□ 0.2
EFNA1-203ENST00000469878 DPF3Q92784 378 aa16.32■□□□□ 0.2
EFNA1-203ENST00000469878 GCC1Q96CN9 775 aa16.32■□□□□ 0.2
EFNA1-203ENST00000469878 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
EFNA1-203ENST00000469878 RPAP3Q9H6T3 665 aaPredicted RBP16.32■□□□□ 0.2
EFNA1-203ENST00000469878 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
EFNA1-203ENST00000469878 PARP14Q460N5 1801 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 USP17L15C9J2P7 530 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 USP17L13C9JLJ4 530 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 USP17L11C9JVI0 530 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 USP17L18D6R9N7 530 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 USP17L22D6RA61 530 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 USP17L17D6RBQ6 530 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 USP17L19D6RCP7 530 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 USP17L20D6RJB6 530 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 TFRCP02786 760 aaKnown RBP16.31■□□□□ 0.2
EFNA1-203ENST00000469878 USP17L24Q0WX57 530 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 CATSPERGQ6ZRH7 1159 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 CRISPLD2Q9H0B8 497 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 BTBD7Q9P203 1132 aa16.31■□□□□ 0.2
EFNA1-203ENST00000469878 SPDYE16A6NNV3 312 aaPredicted RBP16.3■□□□□ 0.2
EFNA1-203ENST00000469878 USP14P54578 494 aa16.3■□□□□ 0.2
EFNA1-203ENST00000469878 UBE3CQ15386 1083 aa16.3■□□□□ 0.2
EFNA1-203ENST00000469878 USP6NLQ92738 828 aa16.3■□□□□ 0.2
EFNA1-203ENST00000469878 NUDT12Q9BQG2 462 aa16.3■□□□□ 0.2
EFNA1-203ENST00000469878 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.3■□□□□ 0.2
EFNA1-203ENST00000469878 FRMPD3Q5JV73 1810 aa16.3■□□□□ 0.2
EFNA1-203ENST00000469878 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 USP17L21D6R901 530 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 PRKAR2AP13861 404 aaKnown RBP16.29■□□□□ 0.2
EFNA1-203ENST00000469878 MAPK4P31152 587 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 MORN1Q5T089 497 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 MAP3K21Q5TCX8 1036 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 CHRDL2Q6WN34 429 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 SIAH1Q8IUQ4 282 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 SOCS4Q8WXH5 440 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 PAWRQ96IZ0 340 aaKnown RBP16.29■□□□□ 0.2
EFNA1-203ENST00000469878 DCTPP1Q9H773 170 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 PCDH10Q9P2E7 1040 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 PCDHB15Q9Y5E8 787 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 SLC4A4Q9Y6R1 1079 aa16.29■□□□□ 0.2
EFNA1-203ENST00000469878 RPTORQ8N122 1335 aa16.28■□□□□ 0.2
EFNA1-203ENST00000469878 GREB1LQ9C091 1923 aaPredicted RBP16.28■□□□□ 0.2
EFNA1-203ENST00000469878 MNX1P50219 401 aaPredicted RBP16.28■□□□□ 0.2
EFNA1-203ENST00000469878 FXR1P51114 621 aaKnown RBP eCLIP16.28■□□□□ 0.2
EFNA1-203ENST00000469878 C12orf60Q5U649 245 aa16.28■□□□□ 0.2
EFNA1-203ENST00000469878 PLEKHH3Q7Z736 793 aa16.28■□□□□ 0.2
EFNA1-203ENST00000469878 SPICE1Q8N0Z3 855 aa16.28■□□□□ 0.2
EFNA1-203ENST00000469878 OTUD7AQ8TE49 926 aaPredicted RBP16.28■□□□□ 0.2
EFNA1-203ENST00000469878 GTF3C2Q8WUA4 911 aaPredicted RBP16.28■□□□□ 0.2
EFNA1-203ENST00000469878 HMX1Q9NP08 348 aaPredicted RBP16.28■□□□□ 0.2
EFNA1-203ENST00000469878 FLRT1Q9NZU1 646 aa16.28■□□□□ 0.2
EFNA1-203ENST00000469878 SWAP70Q9UH65 585 aa16.28■□□□□ 0.2
EFNA1-203ENST00000469878 RABGAP1Q9Y3P9 1069 aa16.28■□□□□ 0.2
EFNA1-203ENST00000469878 TRIOBPQ9H2D6 2365 aa16.27■□□□□ 0.2
EFNA1-203ENST00000469878 ZKSCAN1P17029 563 aaPredicted RBP16.27■□□□□ 0.2
EFNA1-203ENST00000469878 CCND3P30281 292 aaPredicted RBP16.27■□□□□ 0.2
EFNA1-203ENST00000469878 CDK8P49336 464 aa16.27■□□□□ 0.2
EFNA1-203ENST00000469878 CACNB2Q08289 660 aaPredicted RBP16.27■□□□□ 0.2
EFNA1-203ENST00000469878 WDR78Q5VTH9 848 aa16.27■□□□□ 0.2
EFNA1-203ENST00000469878 CTR9Q6PD62 1173 aa16.27■□□□□ 0.2
EFNA1-203ENST00000469878 TMEM179Q6ZVK1 233 aa16.27■□□□□ 0.2
EFNA1-203ENST00000469878 HTATIP2Q9BUP3 242 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms