RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 FAM47AQ5JRC9 791 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 RGMBQ6NW40 437 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 STOX1Q6ZVD7 989 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 TMEM179Q6ZVK1 233 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 DHX32Q7L7V1 743 aaKnown RBP9.55□□□□□ -0.88
HDAC6-216ENST00000468949 CDAN1Q8IWY9 1227 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 IL27Q8NEV9 243 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 KCNB2Q92953 911 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 CCDC102AQ96A19 550 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 TEPSINQ96N21 525 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 BEGAINQ9BUH8 593 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 UPF3BQ9BZI7 483 aaKnown RBP9.55□□□□□ -0.88
HDAC6-216ENST00000468949 TM6SF1Q9BZW5 370 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 NBPF3Q9H094 633 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 PDRG1Q9NUG6 133 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 WBP1LQ9NX94 342 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 NAP1L2Q9ULW6 460 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-216ENST00000468949 ANGEL1Q9UNK9 670 aaKnown RBP9.55□□□□□ -0.88
HDAC6-216ENST00000468949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
HDAC6-216ENST00000468949 CCDC69A6NI79 296 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 FOXN1O15353 648 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 CA12O43570 354 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 GH2P01242 217 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 ASNSP08243 561 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 SLC10A3P09131 477 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 RPS6KB1P23443 525 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 CTCFP49711 727 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-216ENST00000468949 ZNF157P51786 506 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-216ENST00000468949 NEK4P51957 841 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 ICA1Q05084 483 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 WTAPQ15007 396 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 IFIT1BQ5T764 474 aaKnown RBP9.54□□□□□ -0.88
HDAC6-216ENST00000468949 SYNE3Q6ZMZ3 975 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 RUFY3Q7L099 469 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 RASAL3Q86YV0 1011 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 MB21D2Q8IYB1 491 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-216ENST00000468949 BBXQ8WY36 941 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-216ENST00000468949 TMEM87BQ96K49 555 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 FEZ1Q99689 392 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 SH2D4AQ9H788 454 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 DNAJC18Q9H819 358 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 ARHGEF10LQ9HCE6 1279 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 GINM1Q9NU53 330 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 ISY1Q9ULR0 285 aaKnown RBP9.54□□□□□ -0.88
HDAC6-216ENST00000468949 STX8Q9UNK0 236 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 TAF6LQ9Y6J9 622 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 TNKSO95271 1327 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 WDR19Q8NEZ3 1342 aa9.54□□□□□ -0.88
HDAC6-216ENST00000468949 PLIN4Q96Q06 1357 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 FAM155AB1AL88 458 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-216ENST00000468949 SMIM22K7EJ46 135 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 RAD21O60216 631 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 CTNND1O60716 968 aaKnown RBP9.53□□□□□ -0.88
HDAC6-216ENST00000468949 AOC2O75106 756 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 FGRP09769 529 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 AKR1B1P15121 316 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 CAP2P40123 477 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 TATDN1Q6P1N9 297 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 NOL8Q76FK4 1167 aaKnown RBP9.53□□□□□ -0.88
HDAC6-216ENST00000468949 CHST3Q7LGC8 479 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 METTL16Q86W50 562 aaKnown RBP9.53□□□□□ -0.88
HDAC6-216ENST00000468949 HSCBQ8IWL3 235 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 ANKRD13AQ8IZ07 590 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 SCYL3Q8IZE3 742 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 ZSCAN10Q96SZ4 725 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-216ENST00000468949 ZKSCAN3Q9BRR0 538 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 KAT14Q9H8E8 782 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 KANSL2Q9H9L4 492 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 AS3MTQ9HBK9 375 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 INCENPQ9NQS7 918 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 ZBTB21Q9ULJ3 1066 aa9.53□□□□□ -0.88
HDAC6-216ENST00000468949 RIOK3O14730 519 aaKnown RBP9.52□□□□□ -0.89
HDAC6-216ENST00000468949 TTLL1O95922 423 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 CPA1P15085 419 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 MCM2P49736 904 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 MAP3K9P80192 1104 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 Q6ZUG5 572 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 CYB5R4Q7L1T6 521 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 CATIPQ7Z7H3 387 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 TMTC2Q8N394 836 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 NEDD1Q8NHV4 660 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 TCEANC2Q96MN5 208 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 MTA3Q9BTC8 594 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 LRRC2Q9BYS8 371 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 TBC1D2Q9BYX2 928 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 ZSWIM5Q9P217 1185 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 DAXXQ9UER7 740 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-216ENST00000468949 MYH8P13535 1937 aa9.52□□□□□ -0.89
HDAC6-216ENST00000468949 GOLGA8BA8MQT2 603 aa9.51□□□□□ -0.89
HDAC6-216ENST00000468949 USP17L5A8MUK1 530 aa9.51□□□□□ -0.89
HDAC6-216ENST00000468949 UBE2Q2LH0YL09 131 aa9.51□□□□□ -0.89
HDAC6-216ENST00000468949 SH2B2O14492 632 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-216ENST00000468949 SLURP2P0DP57 97 aa9.51□□□□□ -0.89
HDAC6-216ENST00000468949 HSPA8P11142 646 aaKnown RBP9.51□□□□□ -0.89
HDAC6-216ENST00000468949 INPP5BP32019 993 aa9.51□□□□□ -0.89
HDAC6-216ENST00000468949 MAP3K10Q02779 954 aa9.51□□□□□ -0.89
HDAC6-216ENST00000468949 VGLL4Q14135 290 aa9.51□□□□□ -0.89
HDAC6-216ENST00000468949 BECN1Q14457 450 aa9.51□□□□□ -0.89
HDAC6-216ENST00000468949 SEPT2Q15019 361 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms