RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 CEP131Q9UPN4 1083 aa6.58□□□□□ -1.36
GPNMB-207ENST00000468723 TNNI2P48788 182 aa6.57□□□□□ -1.36
GPNMB-207ENST00000468723 APOBRQ0VD83 1088 aa6.57□□□□□ -1.36
GPNMB-207ENST00000468723 C9orf131Q5VYM1 1079 aa6.57□□□□□ -1.36
GPNMB-207ENST00000468723 ZNF746Q6NUN9 644 aaPredicted RBP6.57□□□□□ -1.36
GPNMB-207ENST00000468723 GK5Q6ZS86 529 aa6.57□□□□□ -1.36
GPNMB-207ENST00000468723 KIAA0825Q8IV33 1275 aa6.57□□□□□ -1.36
GPNMB-207ENST00000468723 AGBL5Q8NDL9 886 aa6.57□□□□□ -1.36
GPNMB-207ENST00000468723 DNAJB8Q8NHS0 232 aa6.57□□□□□ -1.36
GPNMB-207ENST00000468723 BAHD1Q8TBE0 780 aaPredicted RBP6.57□□□□□ -1.36
GPNMB-207ENST00000468723 PPP1R13LQ8WUF5 828 aa6.57□□□□□ -1.36
GPNMB-207ENST00000468723 CYB5D2Q8WUJ1 264 aa6.57□□□□□ -1.36
GPNMB-207ENST00000468723 EAF1Q96JC9 268 aaPredicted RBP6.57□□□□□ -1.36
GPNMB-207ENST00000468723 KIAA1522Q9P206 1035 aaPredicted RBP6.57□□□□□ -1.36
GPNMB-207ENST00000468723 SNX11Q9Y5W9 270 aa6.57□□□□□ -1.36
GPNMB-207ENST00000468723 H3BS24 57 aa6.56□□□□□ -1.36
GPNMB-207ENST00000468723 SCAMP3O14828 347 aaKnown RBP6.56□□□□□ -1.36
GPNMB-207ENST00000468723 ZNF865P0CJ78 1059 aaPredicted RBP6.56□□□□□ -1.36
GPNMB-207ENST00000468723 TAL1P17542 331 aaPredicted RBP6.56□□□□□ -1.36
GPNMB-207ENST00000468723 ETV3P41162 512 aa6.56□□□□□ -1.36
GPNMB-207ENST00000468723 CLCQ05315 142 aa6.56□□□□□ -1.36
GPNMB-207ENST00000468723 IKZF1Q13422 519 aa6.56□□□□□ -1.36
GPNMB-207ENST00000468723 PHACTR4Q8IZ21 702 aa6.56□□□□□ -1.36
GPNMB-207ENST00000468723 NKD1Q969G9 470 aa6.56□□□□□ -1.36
GPNMB-207ENST00000468723 KIF2CQ99661 725 aa6.56□□□□□ -1.36
GPNMB-207ENST00000468723 LRRC3Q9BY71 257 aa6.56□□□□□ -1.36
GPNMB-207ENST00000468723 PRDM7Q9NQW5 492 aa6.56□□□□□ -1.36
GPNMB-207ENST00000468723 METTL5Q9NRN9 209 aaKnown RBP6.56□□□□□ -1.36
GPNMB-207ENST00000468723 CAPN6Q9Y6Q1 641 aa6.56□□□□□ -1.36
GPNMB-207ENST00000468723 PITPNM2Q9BZ72 1349 aa6.55□□□□□ -1.36
GPNMB-207ENST00000468723 SLC22A31A6NKX4 558 aa6.55□□□□□ -1.36
GPNMB-207ENST00000468723 VAMP1P23763 118 aa6.55□□□□□ -1.36
GPNMB-207ENST00000468723 RACK1P63244 317 aaKnown RBP6.55□□□□□ -1.36
GPNMB-207ENST00000468723 TNK2Q07912 1038 aa6.55□□□□□ -1.36
GPNMB-207ENST00000468723 MLECQ14165 292 aa6.55□□□□□ -1.36
GPNMB-207ENST00000468723 ARSHQ5FYA8 562 aa6.55□□□□□ -1.36
GPNMB-207ENST00000468723 SLFN12Q8IYM2 578 aa6.55□□□□□ -1.36
GPNMB-207ENST00000468723 ASB11Q8WXH4 323 aa6.55□□□□□ -1.36
GPNMB-207ENST00000468723 NT5C1AQ9BXI3 368 aa6.55□□□□□ -1.36
GPNMB-207ENST00000468723 ATP13A1Q9HD20 1204 aa6.55□□□□□ -1.36
GPNMB-207ENST00000468723 ZSWIM5Q9P217 1185 aa6.55□□□□□ -1.36
GPNMB-207ENST00000468723 LRRN2O75325 713 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 FUT4P22083 530 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 GBP1P32455 592 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 CLCN7P51798 805 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 ZNF792Q3KQV3 632 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 ANGEL2Q5VTE6 544 aaKnown RBP6.54□□□□□ -1.36
GPNMB-207ENST00000468723 MCTP1Q6DN14 999 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 C22orf34Q6ZV56 151 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 PI4K2BQ8TCG2 481 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 UBE2FQ969M7 185 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 CCDC74BQ96LY2 380 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 Q96M66 194 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 ANTXR1Q9H6X2 564 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 SEMA3GQ9NS98 782 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 ADAMTS6Q9UKP5 1117 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 ST14Q9Y5Y6 855 aa6.54□□□□□ -1.36
GPNMB-207ENST00000468723 WASH4PA8MWX3 477 aa6.53□□□□□ -1.36
GPNMB-207ENST00000468723 ATE1O95260 518 aa6.53□□□□□ -1.36
GPNMB-207ENST00000468723 KIR3DL1P43629 444 aa6.53□□□□□ -1.36
GPNMB-207ENST00000468723 ZNF165P49910 485 aa6.53□□□□□ -1.36
GPNMB-207ENST00000468723 ZP2Q05996 745 aa6.53□□□□□ -1.36
GPNMB-207ENST00000468723 SLITRK4Q8IW52 837 aa6.53□□□□□ -1.36
GPNMB-207ENST00000468723 ZNF428Q96B54 188 aa6.53□□□□□ -1.36
GPNMB-207ENST00000468723 EHMT1Q9H9B1 1298 aa6.53□□□□□ -1.36
GPNMB-207ENST00000468723 DDX41Q9UJV9 622 aaKnown RBP6.53□□□□□ -1.36
GPNMB-207ENST00000468723 COL17A1Q9UMD9 1497 aaPredicted RBP6.53□□□□□ -1.36
GPNMB-207ENST00000468723 RNASE1P07998 156 aaKnown RBP6.52□□□□□ -1.37
GPNMB-207ENST00000468723 RAG1P15918 1043 aa6.52□□□□□ -1.37
GPNMB-207ENST00000468723 POLR2BP30876 1174 aaKnown RBP6.52□□□□□ -1.37
GPNMB-207ENST00000468723 CHMP4BP1P59074 171 aa6.52□□□□□ -1.37
GPNMB-207ENST00000468723 HDLBPQ00341 1268 aaKnown RBP6.52□□□□□ -1.37
GPNMB-207ENST00000468723 OVOS1Q6IE37 1185 aa6.52□□□□□ -1.37
GPNMB-207ENST00000468723 CBLL1Q75N03 491 aa6.52□□□□□ -1.37
GPNMB-207ENST00000468723 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.37
GPNMB-207ENST00000468723 COX4I2Q96KJ9 171 aa6.52□□□□□ -1.37
GPNMB-207ENST00000468723 KREMEN1Q96MU8 473 aa6.52□□□□□ -1.37
GPNMB-207ENST00000468723 CARS2Q9HA77 564 aaKnown RBP6.52□□□□□ -1.37
GPNMB-207ENST00000468723 RC3H2Q9HBD1 1191 aaKnown RBP6.52□□□□□ -1.37
GPNMB-207ENST00000468723 MBNL3Q9NUK0 354 aaKnown RBP6.52□□□□□ -1.37
GPNMB-207ENST00000468723 GMIPQ9P107 970 aa6.52□□□□□ -1.37
GPNMB-207ENST00000468723 NT5DC4Q86YG4 428 aa6.51□□□□□ -1.37
GPNMB-207ENST00000468723 REXO1Q8N1G1 1221 aaKnown RBP6.51□□□□□ -1.37
GPNMB-207ENST00000468723 ATG4CQ96DT6 458 aa6.51□□□□□ -1.37
GPNMB-207ENST00000468723 RGS13O14921 159 aa6.5□□□□□ -1.37
GPNMB-207ENST00000468723 UBOX5O94941 541 aa6.5□□□□□ -1.37
GPNMB-207ENST00000468723 PAK2Q13177 524 aa6.5□□□□□ -1.37
GPNMB-207ENST00000468723 FBXW10Q5XX13 1052 aa6.5□□□□□ -1.37
GPNMB-207ENST00000468723 ZNF654Q8IZM8 581 aa6.5□□□□□ -1.37
GPNMB-207ENST00000468723 RNF141Q8WVD5 230 aa6.5□□□□□ -1.37
GPNMB-207ENST00000468723 DUSP15Q9H1R2 295 aaPredicted RBP6.5□□□□□ -1.37
GPNMB-207ENST00000468723 KCNH3Q9ULD8 1083 aa6.5□□□□□ -1.37
GPNMB-207ENST00000468723 FAM86C2PA6NEL3 165 aa6.49□□□□□ -1.37
GPNMB-207ENST00000468723 SLC23A3Q6PIS1 610 aa6.49□□□□□ -1.37
GPNMB-207ENST00000468723 DTWD2Q8NBA8 298 aa6.49□□□□□ -1.37
GPNMB-207ENST00000468723 LRRN4CLQ8ND94 238 aa6.49□□□□□ -1.37
GPNMB-207ENST00000468723 PIWIL2Q8TC59 973 aaKnown RBP6.49□□□□□ -1.37
GPNMB-207ENST00000468723 CNNM2Q9H8M5 875 aa6.49□□□□□ -1.37
GPNMB-207ENST00000468723 TPP2P29144 1249 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-207ENST00000468723 CDCP2Q5VXM1 449 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms