RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 TSPY3P0CV98 308 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 TSPY8P0CW00 308 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 SLURP2P0DP57 97 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 PTPRAP18433 802 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 INPP5BP32019 993 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 VGLL4Q14135 290 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 RABEP1Q15276 862 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 SH3D19Q5HYK7 790 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 BLOC1S2Q6QNY1 142 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 ERO1BQ86YB8 467 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 ZSCAN10Q96SZ4 725 aaPredicted RBP13.28□□□□□ -0.28
MSH5-214ENST00000468602 MAP3K14Q99558 947 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 INCENPQ9NQS7 918 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 ANGEL1Q9UNK9 670 aaKnown RBP13.28□□□□□ -0.28
MSH5-214ENST00000468602 KCNH4Q9UQ05 1017 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 CXCL11O14625 94 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 RANBP6O60518 1105 aaKnown RBP13.27□□□□□ -0.29
MSH5-214ENST00000468602 TTLL1O95922 423 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 GH2P01242 217 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 ZBTB48P10074 688 aaPredicted RBP13.27□□□□□ -0.29
MSH5-214ENST00000468602 FMR1Q06787 632 aaKnown RBP eCLIP13.27□□□□□ -0.29
MSH5-214ENST00000468602 SART3Q15020 963 aaKnown RBP13.27□□□□□ -0.29
MSH5-214ENST00000468602 CYB5R4Q7L1T6 521 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 C12orf42Q96LP6 360 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 JAKMIP1Q96N16 626 aaKnown RBP13.27□□□□□ -0.29
MSH5-214ENST00000468602 KIAA1683Q9H0B3 1180 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 AS3MTQ9HBK9 375 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 TMX2Q9Y320 296 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 AFG3L2Q9Y4W6 797 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 CSADQ9Y600 493 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 CYP46A1Q9Y6A2 500 aa13.27□□□□□ -0.29
MSH5-214ENST00000468602 C19orf81C9J6K1 198 aa13.26□□□□□ -0.29
MSH5-214ENST00000468602 SH2B2O14492 632 aaPredicted RBP13.26□□□□□ -0.29
MSH5-214ENST00000468602 PTPRFP10586 1907 aa13.26□□□□□ -0.29
MSH5-214ENST00000468602 CASTP20810 708 aaKnown RBP13.26□□□□□ -0.29
MSH5-214ENST00000468602 PPIL2Q13356 520 aa13.26□□□□□ -0.29
MSH5-214ENST00000468602 COL9A3Q14050 684 aaPredicted RBP13.26□□□□□ -0.29
MSH5-214ENST00000468602 NID2Q14112 1375 aa13.26□□□□□ -0.29
MSH5-214ENST00000468602 SLC4A8Q2Y0W8 1093 aa13.26□□□□□ -0.29
MSH5-214ENST00000468602 ENAHQ8N8S7 591 aaPredicted RBP13.26□□□□□ -0.29
MSH5-214ENST00000468602 GMCL1P1Q8NEA9 526 aa13.26□□□□□ -0.29
MSH5-214ENST00000468602 ZKSCAN4Q969J2 545 aaPredicted RBP13.26□□□□□ -0.29
MSH5-214ENST00000468602 CEP95Q96GE4 821 aa13.26□□□□□ -0.29
MSH5-214ENST00000468602 TNKSO95271 1327 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 RASSF10A6NK89 507 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 PRC1O43663 620 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 GDF11O95390 407 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 SNHG28P0DPA3 235 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 TOP1P11387 765 aaKnown RBP13.25□□□□□ -0.29
MSH5-214ENST00000468602 SEPT2Q15019 361 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 ANKRD1Q15327 319 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 FAM47AQ5JRC9 791 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 ZNF280CQ8ND82 737 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 UBAC1Q9BSL1 405 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 SH2D4AQ9H788 454 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 LY9Q9HBG7 655 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 PICK1Q9NRD5 415 aa13.25□□□□□ -0.29
MSH5-214ENST00000468602 MYH4Q9Y623 1939 aa13.24□□□□□ -0.29
MSH5-214ENST00000468602 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
MSH5-214ENST00000468602 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
MSH5-214ENST00000468602 PLA2G6O60733 806 aa13.24□□□□□ -0.29
MSH5-214ENST00000468602 USP14P54578 494 aa13.24□□□□□ -0.29
MSH5-214ENST00000468602 BACE1P56817 501 aa13.24□□□□□ -0.29
MSH5-214ENST00000468602 ICA1Q05084 483 aa13.24□□□□□ -0.29
MSH5-214ENST00000468602 LPAR1Q92633 364 aa13.24□□□□□ -0.29
MSH5-214ENST00000468602 ARHGEF10LQ9HCE6 1279 aa13.24□□□□□ -0.29
MSH5-214ENST00000468602 LOC285556D6RIA3 1793 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 A0A0G2JLL6 359 aaPredicted RBP13.23□□□□□ -0.29
MSH5-214ENST00000468602 A0A1W2PRG0 241 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 ERICH2A1L162 156 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 USP17L10C9JJH3 530 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 IFIT3O14879 490 aaKnown RBP13.23□□□□□ -0.29
MSH5-214ENST00000468602 EEF2P13639 858 aaKnown RBP13.23□□□□□ -0.29
MSH5-214ENST00000468602 MCM2P49736 904 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 HUNKP57058 714 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 TROAPQ12815 778 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 TOB2Q14106 344 aaPredicted RBP13.23□□□□□ -0.29
MSH5-214ENST00000468602 SHROOM1Q2M3G4 852 aaPredicted RBP13.23□□□□□ -0.29
MSH5-214ENST00000468602 RRP12Q5JTH9 1297 aaKnown RBP13.23□□□□□ -0.29
MSH5-214ENST00000468602 RGMBQ6NW40 437 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 MOB2Q70IA6 237 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 PRRT2Q7Z6L0 340 aaPredicted RBP13.23□□□□□ -0.29
MSH5-214ENST00000468602 PROCA1Q8NCQ7 364 aaPredicted RBP13.23□□□□□ -0.29
MSH5-214ENST00000468602 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 SLC10A4Q96EP9 437 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 ZNF274Q96GC6 653 aaPredicted RBP13.23□□□□□ -0.29
MSH5-214ENST00000468602 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 TMEM47Q9BQJ4 181 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 TOMM22Q9NS69 142 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 FZD1Q9UP38 647 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 SLC45A1Q9Y2W3 748 aa13.23□□□□□ -0.29
MSH5-214ENST00000468602 FAM155AB1AL88 458 aaPredicted RBP13.22□□□□□ -0.29
MSH5-214ENST00000468602 MPHOSPH10O00566 681 aaKnown RBP13.22□□□□□ -0.29
MSH5-214ENST00000468602 NMT2O60551 498 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 DDAH1O94760 285 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 SLC10A3P09131 477 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 SMARCA1P28370 1054 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 INHBEP58166 350 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms