RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 RBBP6Q7Z6E9 1792 aaKnown RBP20.54■□□□□ 0.88
SSBP1-207ENST00000468267 CYP2D7A0A087X1C5 515 aa20.54■□□□□ 0.88
SSBP1-207ENST00000468267 USP14P54578 494 aa20.54■□□□□ 0.88
SSBP1-207ENST00000468267 IRX3P78415 501 aaPredicted RBP20.54■□□□□ 0.88
SSBP1-207ENST00000468267 SEPT2Q15019 361 aa20.54■□□□□ 0.88
SSBP1-207ENST00000468267 LRRFIP1Q32MZ4 808 aaKnown RBP20.54■□□□□ 0.88
SSBP1-207ENST00000468267 SLC44A5Q8NCS7 719 aa20.54■□□□□ 0.88
SSBP1-207ENST00000468267 EXOC6Q8TAG9 804 aa20.54■□□□□ 0.88
SSBP1-207ENST00000468267 ACER1Q8TDN7 264 aa20.54■□□□□ 0.88
SSBP1-207ENST00000468267 P2RX7Q99572 595 aaKnown RBP20.54■□□□□ 0.88
SSBP1-207ENST00000468267 KIAA1683Q9H0B3 1180 aa20.54■□□□□ 0.88
SSBP1-207ENST00000468267 SMIM22K7EJ46 135 aa20.53■□□□□ 0.88
SSBP1-207ENST00000468267 MPHOSPH10O00566 681 aaKnown RBP20.53■□□□□ 0.88
SSBP1-207ENST00000468267 CTR9Q6PD62 1173 aa20.53■□□□□ 0.88
SSBP1-207ENST00000468267 RAET1EQ8TD07 263 aa20.53■□□□□ 0.88
SSBP1-207ENST00000468267 SH3TC2Q8TF17 1288 aa20.53■□□□□ 0.88
SSBP1-207ENST00000468267 C12orf42Q96LP6 360 aa20.53■□□□□ 0.88
SSBP1-207ENST00000468267 FEZ1Q99689 392 aa20.53■□□□□ 0.88
SSBP1-207ENST00000468267 RWDD1Q9H446 243 aaPredicted RBP20.53■□□□□ 0.88
SSBP1-207ENST00000468267 STAP2Q9UGK3 403 aa20.53■□□□□ 0.88
SSBP1-207ENST00000468267 POTEFA5A3E0 1075 aa20.52■□□□□ 0.88
SSBP1-207ENST00000468267 GSG1L2A8MUP6 293 aa20.52■□□□□ 0.88
SSBP1-207ENST00000468267 CDK8P49336 464 aa20.52■□□□□ 0.88
SSBP1-207ENST00000468267 PRKCZQ05513 592 aa20.52■□□□□ 0.88
SSBP1-207ENST00000468267 ZYXQ15942 572 aaKnown RBP20.52■□□□□ 0.88
SSBP1-207ENST00000468267 GIMAP6Q6P9H5 292 aa20.52■□□□□ 0.88
SSBP1-207ENST00000468267 C16orf86Q6ZW13 317 aa20.52■□□□□ 0.88
SSBP1-207ENST00000468267 MORF4L1Q9UBU8 362 aa20.52■□□□□ 0.88
SSBP1-207ENST00000468267 GABRQQ9UN88 632 aa20.52■□□□□ 0.88
SSBP1-207ENST00000468267 SUPT16HQ9Y5B9 1047 aaKnown RBP20.52■□□□□ 0.88
SSBP1-207ENST00000468267 TNPO2O14787 897 aaKnown RBP20.51■□□□□ 0.87
SSBP1-207ENST00000468267 GPAA1O43292 621 aa20.51■□□□□ 0.87
SSBP1-207ENST00000468267 HERVK_113P62684 666 aa20.51■□□□□ 0.87
SSBP1-207ENST00000468267 SBK1Q52WX2 424 aa20.51■□□□□ 0.87
SSBP1-207ENST00000468267 TMEM179Q6ZVK1 233 aa20.51■□□□□ 0.87
SSBP1-207ENST00000468267 SMC5Q8IY18 1101 aa20.51■□□□□ 0.87
SSBP1-207ENST00000468267 FSD1Q9BTV5 496 aa20.51■□□□□ 0.87
SSBP1-207ENST00000468267 TMEM106CQ9BVX2 250 aa20.51■□□□□ 0.87
SSBP1-207ENST00000468267 USP17L15C9J2P7 530 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 USP17L13C9JLJ4 530 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 USP17L11C9JVI0 530 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 USP17L18D6R9N7 530 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 USP17L22D6RA61 530 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 USP17L17D6RBQ6 530 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 USP17L19D6RCP7 530 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 USP17L20D6RJB6 530 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 M0R2C6 588 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 GNAT2P19087 354 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 GRK4P32298 578 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 PDE1AP54750 535 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 USP17L24Q0WX57 530 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 COA7Q96BR5 231 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 CCDC17Q96LX7 622 aa20.5■□□□□ 0.87
SSBP1-207ENST00000468267 ARPP21Q9UBL0 812 aaPredicted RBP20.5■□□□□ 0.87
SSBP1-207ENST00000468267 A0A1W2PRG0 241 aa20.49■□□□□ 0.87
SSBP1-207ENST00000468267 AKR1B1P15121 316 aa20.49■□□□□ 0.87
SSBP1-207ENST00000468267 FLT3LGP49771 235 aa20.49■□□□□ 0.87
SSBP1-207ENST00000468267 RBPJLQ9UBG7 517 aa20.49■□□□□ 0.87
SSBP1-207ENST00000468267 PATL2C9JE40 543 aaKnown RBP20.48■□□□□ 0.87
SSBP1-207ENST00000468267 IGHDP01880 384 aa20.48■□□□□ 0.87
SSBP1-207ENST00000468267 VCAM1P19320 739 aa20.48■□□□□ 0.87
SSBP1-207ENST00000468267 ZMYM1Q5SVZ6 1142 aa20.48■□□□□ 0.87
SSBP1-207ENST00000468267 CATSPERGQ6ZRH7 1159 aa20.48■□□□□ 0.87
SSBP1-207ENST00000468267 SIAH1Q8IUQ4 282 aa20.48■□□□□ 0.87
SSBP1-207ENST00000468267 GPRC5AQ8NFJ5 357 aa20.48■□□□□ 0.87
SSBP1-207ENST00000468267 GTF3C2Q8WUA4 911 aaPredicted RBP20.48■□□□□ 0.87
SSBP1-207ENST00000468267 SEC62Q99442 399 aaKnown RBP20.48■□□□□ 0.87
SSBP1-207ENST00000468267 LNPKQ9C0E8 428 aa20.48■□□□□ 0.87
SSBP1-207ENST00000468267 TXNRD2Q9NNW7 524 aa20.48■□□□□ 0.87
SSBP1-207ENST00000468267 MYCP01106 439 aaPredicted RBP20.47■□□□□ 0.87
SSBP1-207ENST00000468267 EN2P19622 333 aaPredicted RBP20.47■□□□□ 0.87
SSBP1-207ENST00000468267 IRF5Q13568 498 aa20.47■□□□□ 0.87
SSBP1-207ENST00000468267 POTEEQ6S8J3 1075 aa20.47■□□□□ 0.87
SSBP1-207ENST00000468267 SLAIN1Q8ND83 568 aa20.47■□□□□ 0.87
SSBP1-207ENST00000468267 EVI5LQ96CN4 794 aa20.47■□□□□ 0.87
SSBP1-207ENST00000468267 EPB41L4AQ9HCS5 686 aaPredicted RBP20.47■□□□□ 0.87
SSBP1-207ENST00000468267 ADCY3O60266 1144 aa20.46■□□□□ 0.87
SSBP1-207ENST00000468267 PEX10O60683 326 aa20.46■□□□□ 0.87
SSBP1-207ENST00000468267 APPP05067 770 aa20.46■□□□□ 0.87
SSBP1-207ENST00000468267 B4GALNT3Q6L9W6 998 aa20.46■□□□□ 0.87
SSBP1-207ENST00000468267 BIN2Q9UBW5 565 aaPredicted RBP20.46■□□□□ 0.87
SSBP1-207ENST00000468267 MINDY4BA8MYZ0 360 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 TDO2P48775 406 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 ERVK-9P63128 1117 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 ERVK-24P63145 666 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 ICA1Q05084 483 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 MTFR1Q15390 333 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 Q3C1V9 767 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 CLEC10AQ8IUN9 316 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 PXYLP1Q8TE99 480 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 RPAP3Q9H6T3 665 aaPredicted RBP20.45■□□□□ 0.86
SSBP1-207ENST00000468267 ARHGEF10LQ9HCE6 1279 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 GJD2Q9UKL4 321 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 RABGAP1Q9Y3P9 1069 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 ROBO3Q96MS0 1386 aa20.45■□□□□ 0.86
SSBP1-207ENST00000468267 PLXNB2O15031 1838 aa20.44■□□□□ 0.86
SSBP1-207ENST00000468267 NUCB1Q02818 461 aa20.44■□□□□ 0.86
SSBP1-207ENST00000468267 LBX2Q6XYB7 198 aa20.44■□□□□ 0.86
SSBP1-207ENST00000468267 CHD1LQ86WJ1 897 aa20.44■□□□□ 0.86
SSBP1-207ENST00000468267 IFNL3Q8IZI9 196 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms