RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 MCM3P25205 808 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 HOXA10P31260 410 aaPredicted RBP10.38□□□□□ -0.75
LCA5-203ENST00000467898 SOGA3Q5TF21 947 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 ARL10Q8N8L6 244 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 CAPS2Q9BXY5 557 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 TNMDQ9H2S6 317 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 RETREG1Q9H6L5 497 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 MAPK8IP1Q9UQF2 711 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 STRCQ7RTU9 1775 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 GRIN2DO15399 1336 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 SYF2O95926 243 aaKnown RBP10.38□□□□□ -0.75
LCA5-203ENST00000467898 GCP02774 474 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 SFPQP23246 707 aaKnown RBP eCLIP10.38□□□□□ -0.75
LCA5-203ENST00000467898 SCNN1BP51168 640 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 ADCY1Q08828 1119 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 ENOX2Q16206 610 aaKnown RBP10.38□□□□□ -0.75
LCA5-203ENST00000467898 TMC6Q7Z403 805 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 SRGAP1Q7Z6B7 1085 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 TBC1D7Q9P0N9 293 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 TPX2Q9ULW0 747 aaKnown RBP10.38□□□□□ -0.75
LCA5-203ENST00000467898 TMEM94Q12767 1356 aa10.38□□□□□ -0.75
LCA5-203ENST00000467898 SH3TC1Q8TE82 1336 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 RPSAP08865 295 aaKnown RBP10.37□□□□□ -0.75
LCA5-203ENST00000467898 PSMC4P43686 418 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 INHBCP55103 352 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 ARID5BQ14865 1188 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 KRT72Q14CN4 511 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 CCDC65Q8IXS2 484 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 RASSF8Q8NHQ8 419 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 CORO1BQ9BR76 489 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 KAT14Q9H8E8 782 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 ANKZF1Q9H8Y5 726 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 PXDNQ92626 1479 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 LMTK3Q96Q04 1460 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 PPP1R12BO60237 982 aaPredicted RBP10.37□□□□□ -0.75
LCA5-203ENST00000467898 SMIM24O75264 130 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 NPTXRO95502 500 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 F13A1P00488 732 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 PHEXP78562 749 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 KRT28Q7Z3Y7 464 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 ANKRD13BQ86YJ7 626 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 KIRREL3Q8IZU9 778 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 IGSF22Q8N9C0 903 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 SMARCC2Q8TAQ2 1214 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 NSMCE1Q8WV22 266 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 P3H4Q92791 437 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 BABAM1Q9NWV8 329 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 ZFATQ9P243 1243 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 CIDEBQ9UHD4 219 aa10.37□□□□□ -0.75
LCA5-203ENST00000467898 BECN2A8MW95 431 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 MYO1BO43795 1136 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 VIMP08670 466 aaKnown RBP10.36□□□□□ -0.75
LCA5-203ENST00000467898 ATP4AP20648 1035 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 CHMP4BP1P59074 171 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 PABPC1LQ4VXU2 614 aaKnown RBP10.36□□□□□ -0.75
LCA5-203ENST00000467898 ZNF394Q53GI3 561 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 TMEM110Q86TL2 294 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 MTRQ99707 1265 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 CENPHQ9H3R5 247 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 PCDH18Q9HCL0 1135 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 ABCB6Q9NP58 842 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 ATXN10Q9UBB4 475 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 MYO1AQ9UBC5 1043 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 TUBGCP4Q9UGJ1 667 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 PAIP2BQ9ULR5 123 aaKnown RBP10.36□□□□□ -0.75
LCA5-203ENST00000467898 BUB1BO60566 1050 aaPredicted RBP10.36□□□□□ -0.75
LCA5-203ENST00000467898 PDHBP11177 359 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 WDR93Q6P2C0 686 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 G2E3Q7L622 706 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 CNKSR1Q969H4 720 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 LRRC59Q96AG4 307 aaKnown RBP10.36□□□□□ -0.75
LCA5-203ENST00000467898 TBC1D31Q96DN5 1066 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 JAKMIP1Q96N16 626 aaKnown RBP10.36□□□□□ -0.75
LCA5-203ENST00000467898 IWS1Q96ST2 819 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 IRF2BPLQ9H1B7 796 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 QPCTLQ9NXS2 382 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 WDR35Q9P2L0 1181 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.36□□□□□ -0.75
LCA5-203ENST00000467898 RASSF10A6NK89 507 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 MBD4O95243 580 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 CCDC166P0CW27 439 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 ALDH3A1P30838 453 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 SKOR1P84550 965 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 RIPK1Q13546 671 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 CDC37L1Q7L3B6 337 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 SLF2Q8IX21 1173 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 PPP2R3CQ969Q6 453 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 EPC1Q9H2F5 836 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 CLSTN2Q9H4D0 955 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 DDX25Q9UHL0 483 aaKnown RBP10.36□□□□□ -0.75
LCA5-203ENST00000467898 TMED5Q9Y3A6 229 aa10.36□□□□□ -0.75
LCA5-203ENST00000467898 CTDP1Q9Y5B0 961 aaPredicted RBP10.36□□□□□ -0.75
LCA5-203ENST00000467898 GPR75-ASB3A0A0A6YYF3 556 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 NDUFAB1O14561 156 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 PARP1P09874 1014 aaKnown RBP10.35□□□□□ -0.75
LCA5-203ENST00000467898 GNAQP50148 359 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 SH3BGRP55822 239 aaPredicted RBP10.35□□□□□ -0.75
LCA5-203ENST00000467898 XRCC4Q13426 336 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 SYCP3Q8IZU3 236 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 BPIFA3Q9BQP9 254 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms