RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 MORF4L1Q9UBU8 362 aa21.78■■□□□ 1.08
CGREF1-208ENST00000467539 PATL2C9JE40 543 aaKnown RBP21.77■■□□□ 1.08
CGREF1-208ENST00000467539 SMIM22K7EJ46 135 aa21.77■■□□□ 1.08
CGREF1-208ENST00000467539 MPHOSPH10O00566 681 aaKnown RBP21.77■■□□□ 1.08
CGREF1-208ENST00000467539 IGHDP01880 384 aa21.77■■□□□ 1.08
CGREF1-208ENST00000467539 TMEM179Q6ZVK1 233 aa21.77■■□□□ 1.08
CGREF1-208ENST00000467539 MYPNQ86TC9 1320 aa21.77■■□□□ 1.07
CGREF1-208ENST00000467539 LOC285556D6RIA3 1793 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 USP17L15C9J2P7 530 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 USP17L13C9JLJ4 530 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 USP17L11C9JVI0 530 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 USP17L18D6R9N7 530 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 USP17L22D6RA61 530 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 USP17L17D6RBQ6 530 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 USP17L19D6RCP7 530 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 USP17L20D6RJB6 530 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 TNPO2O14787 897 aaKnown RBP21.76■■□□□ 1.07
CGREF1-208ENST00000467539 GPAA1O43292 621 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 HERVK_113P62684 666 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 PRKCZQ05513 592 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 USP17L24Q0WX57 530 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 DDX60LQ5H9U9 1706 aaKnown RBP21.76■■□□□ 1.07
CGREF1-208ENST00000467539 SH3TC2Q8TF17 1288 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 FEZ1Q99689 392 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 TMEM106CQ9BVX2 250 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 RBPJLQ9UBG7 517 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 ARPP21Q9UBL0 812 aaPredicted RBP21.76■■□□□ 1.07
CGREF1-208ENST00000467539 GABRQQ9UN88 632 aa21.76■■□□□ 1.07
CGREF1-208ENST00000467539 MYH7P12883 1935 aa21.75■■□□□ 1.07
CGREF1-208ENST00000467539 POTEFA5A3E0 1075 aa21.75■■□□□ 1.07
CGREF1-208ENST00000467539 M0R2C6 588 aa21.75■■□□□ 1.07
CGREF1-208ENST00000467539 GRK4P32298 578 aa21.75■■□□□ 1.07
CGREF1-208ENST00000467539 ZYXQ15942 572 aaKnown RBP21.75■■□□□ 1.07
CGREF1-208ENST00000467539 ZMYM1Q5SVZ6 1142 aa21.75■■□□□ 1.07
CGREF1-208ENST00000467539 CATSPERGQ6ZRH7 1159 aa21.75■■□□□ 1.07
CGREF1-208ENST00000467539 TICAM2Q86XR7 235 aa21.75■■□□□ 1.07
CGREF1-208ENST00000467539 SIAH1Q8IUQ4 282 aa21.75■■□□□ 1.07
CGREF1-208ENST00000467539 GTF3C2Q8WUA4 911 aaPredicted RBP21.75■■□□□ 1.07
CGREF1-208ENST00000467539 COA7Q96BR5 231 aa21.75■■□□□ 1.07
CGREF1-208ENST00000467539 FSD1Q9BTV5 496 aa21.75■■□□□ 1.07
CGREF1-208ENST00000467539 ZSWIM8A7E2V4 1837 aa21.74■■□□□ 1.07
CGREF1-208ENST00000467539 A0A1W2PRG0 241 aa21.74■■□□□ 1.07
CGREF1-208ENST00000467539 AKR1B1P15121 316 aa21.74■■□□□ 1.07
CGREF1-208ENST00000467539 FLT3LGP49771 235 aa21.74■■□□□ 1.07
CGREF1-208ENST00000467539 IRF5Q13568 498 aa21.74■■□□□ 1.07
CGREF1-208ENST00000467539 GPRC5AQ8NFJ5 357 aa21.74■■□□□ 1.07
CGREF1-208ENST00000467539 EVI5LQ96CN4 794 aa21.74■■□□□ 1.07
CGREF1-208ENST00000467539 SEC62Q99442 399 aaKnown RBP21.74■■□□□ 1.07
CGREF1-208ENST00000467539 NAV1Q8NEY1 1877 aa21.74■■□□□ 1.07
CGREF1-208ENST00000467539 IFNL3Q8IZI9 196 aa21.73■■□□□ 1.07
CGREF1-208ENST00000467539 LNPKQ9C0E8 428 aa21.73■■□□□ 1.07
CGREF1-208ENST00000467539 TXNRD2Q9NNW7 524 aa21.73■■□□□ 1.07
CGREF1-208ENST00000467539 CENPFP49454 3210 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 APPP05067 770 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 VCAM1P19320 739 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 NUCB1Q02818 461 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 Q3C1V9 767 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 B4GALNT3Q6L9W6 998 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 POTEEQ6S8J3 1075 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 CHD1LQ86WJ1 897 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 SLAIN1Q8ND83 568 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 PXYLP1Q8TE99 480 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 GJD2Q9UKL4 321 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 TMX2Q9Y320 296 aa21.72■■□□□ 1.07
CGREF1-208ENST00000467539 BAZ2AQ9UIF9 1905 aaKnown RBP21.71■■□□□ 1.07
CGREF1-208ENST00000467539 MINDY4BA8MYZ0 360 aa21.71■■□□□ 1.07
CGREF1-208ENST00000467539 ADCY3O60266 1144 aa21.71■■□□□ 1.07
CGREF1-208ENST00000467539 EN2P19622 333 aaPredicted RBP21.71■■□□□ 1.07
CGREF1-208ENST00000467539 LBX2Q6XYB7 198 aa21.71■■□□□ 1.07
CGREF1-208ENST00000467539 NACAP1Q9BZK3 213 aa21.71■■□□□ 1.07
CGREF1-208ENST00000467539 KANSL2Q9H9L4 492 aa21.71■■□□□ 1.07
CGREF1-208ENST00000467539 ARHGEF10LQ9HCE6 1279 aa21.71■■□□□ 1.07
CGREF1-208ENST00000467539 EPB41L4AQ9HCS5 686 aaPredicted RBP21.71■■□□□ 1.07
CGREF1-208ENST00000467539 RABGAP1Q9Y3P9 1069 aa21.71■■□□□ 1.07
CGREF1-208ENST00000467539 RPAP3Q9H6T3 665 aaPredicted RBP21.7■■□□□ 1.06
CGREF1-208ENST00000467539 MKNK2Q9HBH9 465 aa21.7■■□□□ 1.06
CGREF1-208ENST00000467539 HOXC10Q9NYD6 342 aa21.7■■□□□ 1.06
CGREF1-208ENST00000467539 BIN2Q9UBW5 565 aaPredicted RBP21.7■■□□□ 1.06
CGREF1-208ENST00000467539 KIAA0100Q14667 2235 aaKnown RBP21.7■■□□□ 1.06
CGREF1-208ENST00000467539 PEX10O60683 326 aa21.69■■□□□ 1.06
CGREF1-208ENST00000467539 TDO2P48775 406 aa21.69■■□□□ 1.06
CGREF1-208ENST00000467539 ERVK-9P63128 1117 aa21.69■■□□□ 1.06
CGREF1-208ENST00000467539 ERVK-24P63145 666 aa21.69■■□□□ 1.06
CGREF1-208ENST00000467539 UBXN2AP68543 259 aa21.69■■□□□ 1.06
CGREF1-208ENST00000467539 ICA1Q05084 483 aa21.69■■□□□ 1.06
CGREF1-208ENST00000467539 COG2Q14746 738 aa21.69■■□□□ 1.06
CGREF1-208ENST00000467539 MTFR1Q15390 333 aa21.69■■□□□ 1.06
CGREF1-208ENST00000467539 OSBPL3Q9H4L5 887 aa21.69■■□□□ 1.06
CGREF1-208ENST00000467539 SH2D4AQ9H788 454 aa21.69■■□□□ 1.06
CGREF1-208ENST00000467539 MGAMO43451 1857 aa21.69■■□□□ 1.06
CGREF1-208ENST00000467539 MYCP01106 439 aaPredicted RBP21.68■■□□□ 1.06
CGREF1-208ENST00000467539 RASA1P20936 1047 aa21.68■■□□□ 1.06
CGREF1-208ENST00000467539 MAPK4P31152 587 aa21.68■■□□□ 1.06
CGREF1-208ENST00000467539 PLEKHM2Q8IWE5 1019 aa21.68■■□□□ 1.06
CGREF1-208ENST00000467539 LPAR1Q92633 364 aa21.68■■□□□ 1.06
CGREF1-208ENST00000467539 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.68■■□□□ 1.06
CGREF1-208ENST00000467539 ZNF287Q9HBT7 754 aa21.68■■□□□ 1.06
CGREF1-208ENST00000467539 HELLSQ9NRZ9 838 aa21.68■■□□□ 1.06
CGREF1-208ENST00000467539 TNRC18O15417 2968 aaPredicted RBP21.67■■□□□ 1.06
CGREF1-208ENST00000467539 CNMDO75829 334 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms