RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 MTMR4Q9NYA4 1195 aa17.34■□□□□ 0.37
DDX56-208ENST00000467318 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.34■□□□□ 0.37
DDX56-208ENST00000467318 USP17L5A8MUK1 530 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 PRC1O43663 620 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 PTPRAP18433 802 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 RPS6KB1P23443 525 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 GUCY1A2P33402 732 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 HUNKP57058 714 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 JAG1P78504 1218 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 GSE1Q14687 1217 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 SAPCD2Q86UD0 394 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 DGKHQ86XP1 1220 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 SLC10A4Q96EP9 437 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 CEP95Q96GE4 821 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 AS3MTQ9HBK9 375 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.33■□□□□ 0.37
DDX56-208ENST00000467318 SNCAIPQ9Y6H5 919 aa17.33■□□□□ 0.37
DDX56-208ENST00000467318 TTLL1O95922 423 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 NOVP48745 357 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 APLP1P51693 650 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 ANTXR2P58335 489 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 ICA1Q05084 483 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 COL9A3Q14050 684 aaPredicted RBP17.32■□□□□ 0.36
DDX56-208ENST00000467318 CHST3Q7LGC8 479 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 ERO1BQ86YB8 467 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 TMTC2Q8N394 836 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 FBXL16Q8N461 479 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 UPF3BQ9BZI7 483 aaKnown RBP17.32■□□□□ 0.36
DDX56-208ENST00000467318 NYAP2Q9P242 653 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 TLL2Q9Y6L7 1015 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 IFIT3O14879 490 aaKnown RBP17.32■□□□□ 0.36
DDX56-208ENST00000467318 PPATQ06203 517 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 RABEP1Q15276 862 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 IGDCC4Q8TDY8 1250 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 ANKS1AQ92625 1134 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 HHIPL1Q96JK4 782 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 CLMNQ96JQ2 1002 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 ZKSCAN3Q9BRR0 538 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 SYNPO2Q9UMS6 1093 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 STX8Q9UNK0 236 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 ZHX2Q9Y6X8 837 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 TNKSO95271 1327 aa17.32■□□□□ 0.36
DDX56-208ENST00000467318 DOCK1Q14185 1865 aa17.31■□□□□ 0.36
DDX56-208ENST00000467318 GREB1LQ9C091 1923 aaPredicted RBP17.31■□□□□ 0.36
DDX56-208ENST00000467318 SPDYE5A6NIY4 337 aa17.31■□□□□ 0.36
DDX56-208ENST00000467318 NMT2O60551 498 aa17.31■□□□□ 0.36
DDX56-208ENST00000467318 LIFRP42702 1097 aa17.31■□□□□ 0.36
DDX56-208ENST00000467318 FGD1P98174 961 aa17.31■□□□□ 0.36
DDX56-208ENST00000467318 TMEM67Q5HYA8 995 aa17.31■□□□□ 0.36
DDX56-208ENST00000467318 ENAHQ8N8S7 591 aaPredicted RBP17.31■□□□□ 0.36
DDX56-208ENST00000467318 MKL1Q969V6 931 aa17.31■□□□□ 0.36
DDX56-208ENST00000467318 WDR18Q9BV38 432 aa17.31■□□□□ 0.36
DDX56-208ENST00000467318 SH2D4AQ9H788 454 aa17.31■□□□□ 0.36
DDX56-208ENST00000467318 ELP3Q9H9T3 547 aa17.31■□□□□ 0.36
DDX56-208ENST00000467318 ARHGEF10LQ9HCE6 1279 aa17.31■□□□□ 0.36
DDX56-208ENST00000467318 ATAD5Q96QE3 1844 aa17.3■□□□□ 0.36
DDX56-208ENST00000467318 OTOFQ9HC10 1997 aa17.3■□□□□ 0.36
DDX56-208ENST00000467318 EEF2P13639 858 aaKnown RBP17.3■□□□□ 0.36
DDX56-208ENST00000467318 CPA1P15085 419 aa17.3■□□□□ 0.36
DDX56-208ENST00000467318 NEK4P51957 841 aa17.3■□□□□ 0.36
DDX56-208ENST00000467318 WTAPQ15007 396 aa17.3■□□□□ 0.36
DDX56-208ENST00000467318 SEC23AQ15436 765 aa17.3■□□□□ 0.36
DDX56-208ENST00000467318 IFIT1BQ5T764 474 aaKnown RBP17.3■□□□□ 0.36
DDX56-208ENST00000467318 ZNF280CQ8ND82 737 aa17.3■□□□□ 0.36
DDX56-208ENST00000467318 AGXT2Q9BYV1 514 aa17.3■□□□□ 0.36
DDX56-208ENST00000467318 ALDH8A1Q9H2A2 487 aaPredicted RBP17.3■□□□□ 0.36
DDX56-208ENST00000467318 CREBZFQ9NS37 354 aa17.3■□□□□ 0.36
DDX56-208ENST00000467318 RCSD1Q6JBY9 416 aa17.29■□□□□ 0.36
DDX56-208ENST00000467318 CCDC84Q86UT8 332 aaPredicted RBP17.29■□□□□ 0.36
DDX56-208ENST00000467318 PDRG1Q9NUG6 133 aa17.29■□□□□ 0.36
DDX56-208ENST00000467318 CLIP2Q9UDT6 1046 aa17.29■□□□□ 0.36
DDX56-208ENST00000467318 ABT1Q9ULW3 272 aaKnown RBP17.29■□□□□ 0.36
DDX56-208ENST00000467318 USP17L10C9JJH3 530 aa17.29■□□□□ 0.36
DDX56-208ENST00000467318 SH2B2O14492 632 aaPredicted RBP17.29■□□□□ 0.36
DDX56-208ENST00000467318 TOP1P11387 765 aaKnown RBP17.29■□□□□ 0.36
DDX56-208ENST00000467318 PPIL2Q13356 520 aa17.29■□□□□ 0.36
DDX56-208ENST00000467318 ANKRD1Q15327 319 aa17.29■□□□□ 0.36
DDX56-208ENST00000467318 Q6ZUG5 572 aa17.29■□□□□ 0.36
DDX56-208ENST00000467318 SIAH1Q8IUQ4 282 aa17.29■□□□□ 0.36
DDX56-208ENST00000467318 OPTNQ96CV9 577 aa17.29■□□□□ 0.36
DDX56-208ENST00000467318 TCEANC2Q96MN5 208 aa17.29■□□□□ 0.36
DDX56-208ENST00000467318 AFG3L2Q9Y4W6 797 aa17.29■□□□□ 0.36
DDX56-208ENST00000467318 HTRA3P83110 453 aa17.28■□□□□ 0.36
DDX56-208ENST00000467318 ATP2B2Q01814 1243 aa17.28■□□□□ 0.36
DDX56-208ENST00000467318 SPP2Q13103 211 aa17.28■□□□□ 0.36
DDX56-208ENST00000467318 RGMBQ6NW40 437 aa17.28■□□□□ 0.36
DDX56-208ENST00000467318 SGMS1Q86VZ5 419 aa17.28■□□□□ 0.36
DDX56-208ENST00000467318 CLEC10AQ8IUN9 316 aa17.28■□□□□ 0.36
DDX56-208ENST00000467318 OTUD5Q96G74 571 aa17.28■□□□□ 0.36
DDX56-208ENST00000467318 TMEM47Q9BQJ4 181 aa17.28■□□□□ 0.36
DDX56-208ENST00000467318 LRRC2Q9BYS8 371 aa17.28■□□□□ 0.36
DDX56-208ENST00000467318 LY9Q9HBG7 655 aa17.28■□□□□ 0.36
DDX56-208ENST00000467318 TMX2Q9Y320 296 aa17.28■□□□□ 0.36
DDX56-208ENST00000467318 C19orf81C9J6K1 198 aa17.27■□□□□ 0.36
DDX56-208ENST00000467318 CXCL11O14625 94 aa17.27■□□□□ 0.36
DDX56-208ENST00000467318 ST18O60284 1047 aa17.27■□□□□ 0.36
DDX56-208ENST00000467318 ZBTB48P10074 688 aaPredicted RBP17.27■□□□□ 0.36
DDX56-208ENST00000467318 ZNF157P51786 506 aaPredicted RBP17.27■□□□□ 0.36
DDX56-208ENST00000467318 USP14P54578 494 aa17.27■□□□□ 0.36
DDX56-208ENST00000467318 BACE1P56817 501 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms