RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 IARSP41252 1262 aaKnown RBP11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 CCDC93Q567U6 631 aa11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 IFIT1BQ5T764 474 aaKnown RBP11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 L1TD1Q5T7N2 865 aaKnown RBP11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 FERMT3Q86UX7 667 aa11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 DGKHQ86XP1 1220 aa11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 RTKN2Q8IZC4 609 aa11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 FANCBQ8NB91 859 aa11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 SYAP1Q96A49 352 aaPredicted RBP11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 C8orf76Q96K31 380 aa11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 PSMD1Q99460 953 aa11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 MAP3K14Q99558 947 aa11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 PDGFDQ9GZP0 370 aaPredicted RBP11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 GZF1Q9H116 711 aaPredicted RBP11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 CFAP45Q9UL16 551 aa11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 TTF2Q9UNY4 1162 aaKnown RBP11.1□□□□□ -0.63
APOBEC1-202ENST00000467171 FLT1P17948 1338 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 USP17L3A6NCW0 530 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 USP17L4A6NCW7 530 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 PRDM1O75626 825 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 TGFB2P61812 414 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 SSRP1Q08945 709 aaKnown RBP11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 TROAPQ12815 778 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 FOXD4L6Q3SYB3 417 aaPredicted RBP11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 DACT2Q5SW24 774 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 SOGA3Q5TF21 947 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 FOXD4L3Q6VB84 417 aaPredicted RBP11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 C16orf86Q6ZW13 317 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 USP17L1Q7RTZ2 530 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 BRAPQ7Z569 592 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 RAB11FIP4Q86YS3 637 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 MAPKAPK5Q8IW41 473 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 TEKT1Q969V4 418 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 ZDHHC15Q96MV8 337 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 ZNF396Q96N95 335 aaPredicted RBP11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 ZKSCAN3Q9BRR0 538 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 GDPD2Q9HCC8 539 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 KIAA1551Q9HCM1 1747 aa11.09□□□□□ -0.63
APOBEC1-202ENST00000467171 GOLGA6L3A6NEY3 463 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 TSPY2A6NKD2 308 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 FIBPO43427 364 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 ECE2O60344 883 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 GADD45BO75293 160 aaPredicted RBP11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 RXRAP19793 462 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 KCNA3P22001 575 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 PSEN2P49810 448 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 PLCD1P51178 756 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 ZSCAN23Q3MJ62 389 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 APOBEC3HQ6NTF7 200 aaKnown RBP11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 CAVIN1Q6NZI2 390 aaKnown RBP11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 NBPF11Q86T75 865 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 TTC6Q86TZ1 520 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 TRIM22Q8IYM9 498 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 STK11IPQ8N1F8 1099 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 CRACR2BQ8N4Y2 399 aaPredicted RBP11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 LEO1Q8WVC0 666 aaPredicted RBP11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 ALG1Q9BT22 464 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 MYL10Q9BUA6 226 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 RNF26Q9BY78 433 aaPredicted RBP11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 DBNDD1Q9H9R9 158 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 RCOR1Q9UKL0 485 aa11.08□□□□□ -0.64
APOBEC1-202ENST00000467171 WDHD1O75717 1129 aaPredicted RBP11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 DEXIO95424 95 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 DPEP1P16444 411 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 RASA1P20936 1047 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 CRKP46108 304 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 NOVP48745 357 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 TFAP4Q01664 338 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 KIF23Q02241 960 aaPredicted RBP11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 FUT2Q10981 343 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 RCSD1Q6JBY9 416 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 ZNF444Q8N0Y2 327 aaPredicted RBP11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 DYNLL2Q96FJ2 89 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 SPATA32Q96LK8 384 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 MTFR1LQ9H019 292 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 MKNK2Q9HBH9 465 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 TMEM63CQ9P1W3 806 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 SERPINA10Q9UK55 444 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 MYO3BQ8WXR4 1341 aa11.07□□□□□ -0.64
APOBEC1-202ENST00000467171 PRPF3O43395 683 aaKnown RBP11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 C21orf2O43822 256 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 LETM1O95202 739 aaPredicted RBP11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 U2AF2P26368 475 aaKnown RBP eCLIP11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 POLD1P28340 1107 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 CDK8P49336 464 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 MRE11P49959 708 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 GABPAQ06546 454 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 TRIM29Q14134 588 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 AOC3Q16853 763 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 FAM47AQ5JRC9 791 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 KRT40Q6A162 431 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 CDC42EP5Q6NZY7 148 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 FAM173BQ6P4H8 233 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 TMTC3Q6ZXV5 915 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 CCDC144CPQ8IYA2 1237 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 NEDD1Q8NHV4 660 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 NUP133Q8WUM0 1156 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms