RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 USP31Q70CQ4 1352 aa8□□□□□ -1.13
PRPF40A-205ENST00000467114 CTSHP09668 335 aa8□□□□□ -1.13
PRPF40A-205ENST00000467114 SPOCD1Q6ZMY3 1216 aa8□□□□□ -1.13
PRPF40A-205ENST00000467114 PRR23BQ6ZRT6 265 aa8□□□□□ -1.13
PRPF40A-205ENST00000467114 PPP1R13LQ8WUF5 828 aa8□□□□□ -1.13
PRPF40A-205ENST00000467114 JARID2Q92833 1246 aaPredicted RBP8□□□□□ -1.13
PRPF40A-205ENST00000467114 KRTAP4-7Q9BYR0 210 aa8□□□□□ -1.13
PRPF40A-205ENST00000467114 TSPAN15O95858 294 aa7.99□□□□□ -1.13
PRPF40A-205ENST00000467114 PSMD2Q13200 908 aa7.99□□□□□ -1.13
PRPF40A-205ENST00000467114 MPZL3Q6UWV2 235 aa7.99□□□□□ -1.13
PRPF40A-205ENST00000467114 TMC4Q7Z404 712 aa7.99□□□□□ -1.13
PRPF40A-205ENST00000467114 PPP1R16BQ96T49 567 aa7.99□□□□□ -1.13
PRPF40A-205ENST00000467114 DUSP15Q9H1R2 295 aaPredicted RBP7.99□□□□□ -1.13
PRPF40A-205ENST00000467114 SLAMF8Q9P0V8 285 aa7.99□□□□□ -1.13
PRPF40A-205ENST00000467114 RAP1GAPP47736 663 aa7.98□□□□□ -1.13
PRPF40A-205ENST00000467114 GAB4Q2WGN9 574 aa7.98□□□□□ -1.13
PRPF40A-205ENST00000467114 KRTAP19-4Q3LI73 84 aa7.98□□□□□ -1.13
PRPF40A-205ENST00000467114 FBLN7Q53RD9 439 aa7.98□□□□□ -1.13
PRPF40A-205ENST00000467114 TMEM201Q5SNT2 666 aa7.98□□□□□ -1.13
PRPF40A-205ENST00000467114 TTC6Q86TZ1 520 aa7.98□□□□□ -1.13
PRPF40A-205ENST00000467114 CORINQ9Y5Q5 1042 aa7.98□□□□□ -1.13
PRPF40A-205ENST00000467114 DNAJC25-GNG10A0A024R161 153 aa7.97□□□□□ -1.13
PRPF40A-205ENST00000467114 FAM221AA4D161 298 aa7.97□□□□□ -1.13
PRPF40A-205ENST00000467114 CILPO75339 1184 aa7.97□□□□□ -1.13
PRPF40A-205ENST00000467114 SRFP11831 508 aa7.97□□□□□ -1.13
PRPF40A-205ENST00000467114 CCDC27Q2M243 656 aa7.97□□□□□ -1.13
PRPF40A-205ENST00000467114 RALGPS1Q5JS13 557 aa7.97□□□□□ -1.13
PRPF40A-205ENST00000467114 DIEXFQ68CQ4 756 aaKnown RBP7.97□□□□□ -1.13
PRPF40A-205ENST00000467114 CYB5D2Q8WUJ1 264 aa7.97□□□□□ -1.13
PRPF40A-205ENST00000467114 GPR62Q9BZJ7 368 aa7.97□□□□□ -1.13
PRPF40A-205ENST00000467114 TRIT1Q9H3H1 467 aaKnown RBP7.97□□□□□ -1.13
PRPF40A-205ENST00000467114 TMEM59LQ9UK28 342 aa7.97□□□□□ -1.13
PRPF40A-205ENST00000467114 WASH4PA8MWX3 477 aa7.96□□□□□ -1.14
PRPF40A-205ENST00000467114 RAC2P15153 192 aa7.96□□□□□ -1.14
PRPF40A-205ENST00000467114 LMNB2Q03252 620 aa7.96□□□□□ -1.14
PRPF40A-205ENST00000467114 CAMK2GQ13555 558 aaPredicted RBP7.96□□□□□ -1.14
PRPF40A-205ENST00000467114 BNC2Q6ZN30 1099 aaPredicted RBP7.96□□□□□ -1.14
PRPF40A-205ENST00000467114 SYDE1Q6ZW31 735 aaPredicted RBP7.96□□□□□ -1.14
PRPF40A-205ENST00000467114 ABHD4Q8TB40 342 aa7.96□□□□□ -1.14
PRPF40A-205ENST00000467114 PRR36Q9H6K5 1346 aa7.96□□□□□ -1.14
PRPF40A-205ENST00000467114 UPK3BL1B0FP48 263 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 UPK3BL2E5RIL1 263 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 KRT1P04264 644 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 PLCG1P19174 1290 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 TPP2P29144 1249 aaPredicted RBP7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 XPCQ01831 940 aaPredicted RBP7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 TMCO4Q5TGY1 634 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 FBXO33Q7Z6M2 555 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 CREG2Q8IUH2 290 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 SLFN12Q8IYM2 578 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 DTWD2Q8NBA8 298 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 FBXO15Q8NCQ5 510 aaPredicted RBP7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 FAM13CQ8NE31 585 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 GATAD2BQ8WXI9 593 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 CRELD1Q96HD1 420 aa7.95□□□□□ -1.14
PRPF40A-205ENST00000467114 BPNT1O95861 308 aa7.94□□□□□ -1.14
PRPF40A-205ENST00000467114 HPXP02790 462 aa7.94□□□□□ -1.14
PRPF40A-205ENST00000467114 YARSP54577 528 aaKnown RBP7.94□□□□□ -1.14
PRPF40A-205ENST00000467114 MFAP1P55081 439 aaKnown RBP7.94□□□□□ -1.14
PRPF40A-205ENST00000467114 LCE4AQ5TA78 99 aa7.94□□□□□ -1.14
PRPF40A-205ENST00000467114 RHOVQ96L33 236 aa7.94□□□□□ -1.14
PRPF40A-205ENST00000467114 FAM161BQ96MY7 647 aa7.94□□□□□ -1.14
PRPF40A-205ENST00000467114 TOX2Q96NM4 488 aa7.94□□□□□ -1.14
PRPF40A-205ENST00000467114 NSUN3Q9H649 340 aaKnown RBP7.94□□□□□ -1.14
PRPF40A-205ENST00000467114 GPATCH2Q9NW75 528 aa7.94□□□□□ -1.14
PRPF40A-205ENST00000467114 F13A1P00488 732 aa7.93□□□□□ -1.14
PRPF40A-205ENST00000467114 PF4P02776 101 aa7.93□□□□□ -1.14
PRPF40A-205ENST00000467114 CFPP27918 469 aa7.93□□□□□ -1.14
PRPF40A-205ENST00000467114 ERVFC1P60507 584 aa7.93□□□□□ -1.14
PRPF40A-205ENST00000467114 TSPYL5Q86VY4 417 aaPredicted RBP7.93□□□□□ -1.14
PRPF40A-205ENST00000467114 RNF141Q8WVD5 230 aa7.93□□□□□ -1.14
PRPF40A-205ENST00000467114 MYLIPQ8WY64 445 aa7.93□□□□□ -1.14
PRPF40A-205ENST00000467114 RSRP1Q9BUV0 290 aa7.93□□□□□ -1.14
PRPF40A-205ENST00000467114 ADAMTS10Q9H324 1103 aa7.93□□□□□ -1.14
PRPF40A-205ENST00000467114 KCNH3Q9ULD8 1083 aa7.93□□□□□ -1.14
PRPF40A-205ENST00000467114 HK2P52789 917 aa7.92□□□□□ -1.14
PRPF40A-205ENST00000467114 C1QL4Q86Z23 238 aa7.92□□□□□ -1.14
PRPF40A-205ENST00000467114 RGS22Q8NE09 1264 aa7.92□□□□□ -1.14
PRPF40A-205ENST00000467114 TMEM74Q96NL1 305 aa7.92□□□□□ -1.14
PRPF40A-205ENST00000467114 DIRC2Q96SL1 478 aa7.92□□□□□ -1.14
PRPF40A-205ENST00000467114 SP110Q9HB58 689 aa7.92□□□□□ -1.14
PRPF40A-205ENST00000467114 DUSP13Q9UII6 198 aa7.92□□□□□ -1.14
PRPF40A-205ENST00000467114 F6X3S4 739 aa7.91□□□□□ -1.14
PRPF40A-205ENST00000467114 C1QTNF9P0C862 333 aa7.91□□□□□ -1.14
PRPF40A-205ENST00000467114 ERCC3P19447 782 aa7.91□□□□□ -1.14
PRPF40A-205ENST00000467114 ANKLE2Q86XL3 938 aa7.91□□□□□ -1.14
PRPF40A-205ENST00000467114 SORBS3O60504 671 aa7.9□□□□□ -1.14
PRPF40A-205ENST00000467114 EGR3Q06889 387 aa7.9□□□□□ -1.14
PRPF40A-205ENST00000467114 RELL1Q8IUW5 271 aa7.9□□□□□ -1.14
PRPF40A-205ENST00000467114 PDZD8Q8NEN9 1154 aa7.9□□□□□ -1.14
PRPF40A-205ENST00000467114 EPB41L4BQ9H329 900 aa7.9□□□□□ -1.14
PRPF40A-205ENST00000467114 DCP1AQ9NPI6 582 aaPredicted RBP7.9□□□□□ -1.14
PRPF40A-205ENST00000467114 REV1Q9UBZ9 1251 aa7.9□□□□□ -1.14
PRPF40A-205ENST00000467114 POLR3KQ9Y2Y1 108 aaPredicted RBP7.9□□□□□ -1.14
PRPF40A-205ENST00000467114 NFIBO00712 420 aa7.89□□□□□ -1.15
PRPF40A-205ENST00000467114 LRRN2O75325 713 aa7.89□□□□□ -1.15
PRPF40A-205ENST00000467114 HTR3BO95264 441 aa7.89□□□□□ -1.15
PRPF40A-205ENST00000467114 ZGLP1P0C6A0 271 aa7.89□□□□□ -1.15
PRPF40A-205ENST00000467114 PWP1Q13610 501 aa7.89□□□□□ -1.15
PRPF40A-205ENST00000467114 ZSCAN18Q8TBC5 510 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms