RNA–Protein interactions for RNA: ENST00000466560.1

LINC00879-204, long intergenic non-protein coding RNA 879, humanhuman

TSL 5

Gene LINC00879, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-204ENST00000466560 CPLX3Q8WVH0 158 aa7.12□□□□□ -1.27
LINC00879-204ENST00000466560 HEXIM2Q96MH2 286 aaKnown RBP7.12□□□□□ -1.27
LINC00879-204ENST00000466560 SRRTQ9BXP5 876 aaKnown RBP7.12□□□□□ -1.27
LINC00879-204ENST00000466560 TANGO6Q9C0B7 1094 aa7.12□□□□□ -1.27
LINC00879-204ENST00000466560 ANTXR1Q9H6X2 564 aa7.12□□□□□ -1.27
LINC00879-204ENST00000466560 CHURC1-FNTBB4DL54 471 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 CEACAM5P06731 702 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 FGRP09769 529 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 ITIH2P19823 946 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 OXCT1P55809 520 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 BNIP3Q12983 259 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 SLBPQ14493 270 aaKnown RBP eCLIP7.11□□□□□ -1.27
LINC00879-204ENST00000466560 IFI16Q16666 785 aaKnown RBP7.11□□□□□ -1.27
LINC00879-204ENST00000466560 MCF2L2Q86YR7 1114 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 MCATQ8IVS2 390 aaKnown RBP7.11□□□□□ -1.27
LINC00879-204ENST00000466560 AGBL5Q8NDL9 886 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 MISP3Q96FF7 219 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 TMEM87BQ96K49 555 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 MKNK2Q9HBH9 465 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 KLHL3Q9UH77 587 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 GTF2IRD1Q9UHL9 959 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 ZNRF3Q9ULT6 936 aa7.11□□□□□ -1.27
LINC00879-204ENST00000466560 SLC22A31A6NKX4 558 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 DNAJA2O60884 412 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 SSBP05455 408 aaKnown RBP eCLIP7.1□□□□□ -1.27
LINC00879-204ENST00000466560 MLECQ14165 292 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 SLC6A19Q695T7 634 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 FAM214BQ7L5A3 538 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 SPRED2Q7Z698 418 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 WFDC3Q8IUB2 231 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 FAM13CQ8NE31 585 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 CRBNQ96SW2 442 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 FOXQ1Q9C009 403 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 PLAGL2Q9UPG8 496 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 MRVI1Q9Y6F6 885 aa7.1□□□□□ -1.27
LINC00879-204ENST00000466560 LRIG2O94898 1065 aa7.09□□□□□ -1.27
LINC00879-204ENST00000466560 IMPDH2P12268 514 aa7.09□□□□□ -1.27
LINC00879-204ENST00000466560 ATP2B1P20020 1258 aa7.09□□□□□ -1.27
LINC00879-204ENST00000466560 EIF6P56537 245 aaKnown RBP7.09□□□□□ -1.27
LINC00879-204ENST00000466560 MRPL41Q8IXM3 137 aaKnown RBP7.09□□□□□ -1.27
LINC00879-204ENST00000466560 SREK1Q8WXA9 508 aaKnown RBP7.09□□□□□ -1.27
LINC00879-204ENST00000466560 DPH2Q9BQC3 489 aaPredicted RBP7.09□□□□□ -1.27
LINC00879-204ENST00000466560 PPP1R1BQ9UD71 204 aaPredicted RBP7.09□□□□□ -1.27
LINC00879-204ENST00000466560 STRIP2Q9ULQ0 834 aa7.09□□□□□ -1.27
LINC00879-204ENST00000466560 TMEM265A0A087WTH1 108 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 IGF2BP3O00425 579 aaKnown RBP eCLIP7.08□□□□□ -1.28
LINC00879-204ENST00000466560 EOMESO95936 686 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 CST3P01034 146 aaPredicted RBP7.08□□□□□ -1.28
LINC00879-204ENST00000466560 CAP2P40123 477 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 PRKCQQ04759 706 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 PLCL1Q15111 1095 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 SF3A1Q15459 793 aaKnown RBP7.08□□□□□ -1.28
LINC00879-204ENST00000466560 LRRFIP1Q32MZ4 808 aaKnown RBP7.08□□□□□ -1.28
LINC00879-204ENST00000466560 ARSHQ5FYA8 562 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 PRAMEF13Q5VWM6 474 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 XAGE3Q8WTP9 111 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 ANAPC16Q96DE5 110 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 ATG4CQ96DT6 458 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 SHDQ96IW2 340 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 MIPEPQ99797 713 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 VAV3Q9UKW4 847 aa7.08□□□□□ -1.28
LINC00879-204ENST00000466560 PAX4O43316 350 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 SLITRK5O94991 958 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 CD8BP10966 210 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 ETFBP38117 255 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 CD96P40200 585 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 GIPRP48546 466 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 YARSP54577 528 aaKnown RBP7.07□□□□□ -1.28
LINC00879-204ENST00000466560 AOC3Q16853 763 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 OVOS1Q6IE37 1185 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 CBLL1Q75N03 491 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 RBBP8NLQ8NC74 664 aaPredicted RBP7.07□□□□□ -1.28
LINC00879-204ENST00000466560 TMEM40Q8WWA1 233 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 HRASLS5Q96KN8 279 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 DRC1Q96MC2 740 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 PRDM5Q9NQX1 630 aaPredicted RBP7.07□□□□□ -1.28
LINC00879-204ENST00000466560 GMIPQ9P107 970 aa7.07□□□□□ -1.28
LINC00879-204ENST00000466560 MEIS3P2A8K0S8 358 aa7.06□□□□□ -1.28
LINC00879-204ENST00000466560 GNAT3A8MTJ3 354 aa7.06□□□□□ -1.28
LINC00879-204ENST00000466560 GTF2F1P35269 517 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC00879-204ENST00000466560 CDCP2Q5VXM1 449 aa7.06□□□□□ -1.28
LINC00879-204ENST00000466560 RUFY4Q6ZNE9 571 aa7.06□□□□□ -1.28
LINC00879-204ENST00000466560 LSRQ86X29 649 aaPredicted RBP7.06□□□□□ -1.28
LINC00879-204ENST00000466560 DHX38Q92620 1227 aaKnown RBP7.06□□□□□ -1.28
LINC00879-204ENST00000466560 TNKS2Q9H2K2 1166 aa7.06□□□□□ -1.28
LINC00879-204ENST00000466560 CNNM2Q9H8M5 875 aa7.06□□□□□ -1.28
LINC00879-204ENST00000466560 NME1P15531 152 aaKnown RBP7.05□□□□□ -1.28
LINC00879-204ENST00000466560 FUT4P22083 530 aa7.05□□□□□ -1.28
LINC00879-204ENST00000466560 NLRC3Q7RTR2 1065 aa7.05□□□□□ -1.28
LINC00879-204ENST00000466560 SPACA3Q8IXA5 215 aa7.05□□□□□ -1.28
LINC00879-204ENST00000466560 SLFN12Q8IYM2 578 aa7.05□□□□□ -1.28
LINC00879-204ENST00000466560 PHACTR4Q8IZ21 702 aa7.05□□□□□ -1.28
LINC00879-204ENST00000466560 FAM169BQ8N8A8 192 aa7.05□□□□□ -1.28
LINC00879-204ENST00000466560 MFSD2AQ8NA29 543 aa7.05□□□□□ -1.28
LINC00879-204ENST00000466560 KIF2CQ99661 725 aa7.05□□□□□ -1.28
LINC00879-204ENST00000466560 ZNF408Q9H9D4 720 aa7.05□□□□□ -1.28
LINC00879-204ENST00000466560 TPX2Q9ULW0 747 aaKnown RBP7.05□□□□□ -1.28
LINC00879-204ENST00000466560 MAPK8IP1Q9UQF2 711 aa7.05□□□□□ -1.28
LINC00879-204ENST00000466560 SNX11Q9Y5W9 270 aa7.05□□□□□ -1.28
LINC00879-204ENST00000466560 RAG1P15918 1043 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms