RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CDPF1Q6NVV7 123 aa6.49□□□□□ -1.37
CDC42BPA-211ENST00000466538 C6orf15Q6UXA7 325 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-211ENST00000466538 EEPD1Q7L9B9 569 aa6.49□□□□□ -1.37
CDC42BPA-211ENST00000466538 TXNRD3Q86VQ6 643 aa6.49□□□□□ -1.37
CDC42BPA-211ENST00000466538 SMARCC1Q92922 1105 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-211ENST00000466538 EPN3Q9H201 632 aa6.49□□□□□ -1.37
CDC42BPA-211ENST00000466538 SUCOQ9UBS9 1254 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-211ENST00000466538 CEP131Q9UPN4 1083 aa6.49□□□□□ -1.37
CDC42BPA-211ENST00000466538 UBOX5O94941 541 aa6.48□□□□□ -1.37
CDC42BPA-211ENST00000466538 NFICP08651 508 aa6.48□□□□□ -1.37
CDC42BPA-211ENST00000466538 ZNF143P52747 638 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-211ENST00000466538 CHMP4BP1P59074 171 aa6.48□□□□□ -1.37
CDC42BPA-211ENST00000466538 GNPTABQ3T906 1256 aa6.48□□□□□ -1.37
CDC42BPA-211ENST00000466538 ARMCX6Q7L4S7 300 aa6.48□□□□□ -1.37
CDC42BPA-211ENST00000466538 GIMAP7Q8NHV1 300 aa6.48□□□□□ -1.37
CDC42BPA-211ENST00000466538 MYRFLQ96LU7 910 aa6.48□□□□□ -1.37
CDC42BPA-211ENST00000466538 PSMG3-AS1Q96PY0 264 aa6.48□□□□□ -1.37
CDC42BPA-211ENST00000466538 SEMA6CQ9H3T2 930 aa6.48□□□□□ -1.37
CDC42BPA-211ENST00000466538 CCDC85CA6NKD9 419 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 CLEC3AO75596 197 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 CLSTN1O94985 981 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 NAT2P11245 290 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 BMP3P12645 472 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 RAB6AP20340 208 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 MAP4P27816 1152 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 KIAA1211LQ6NV74 962 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 SEZ6L2Q6UXD5 910 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 UBE3DQ7Z6J8 389 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 TMEM192Q8IY95 271 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 BAHD1Q8TBE0 780 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 FBLIM1Q8WUP2 373 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 UTP4Q969X6 686 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 DNAJC7Q99615 494 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 DAGLAQ9Y4D2 1042 aa6.47□□□□□ -1.37
CDC42BPA-211ENST00000466538 FAM95CA0A1B0GW59 222 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 RNF225M0QZC1 329 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 DHX15O43143 795 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 HSD3B2P26439 372 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 POLR2BP30876 1174 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 MTERF2Q49AM1 385 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 SGO2Q562F6 1265 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 PAOXQ6QHF9 649 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 JAZF1Q86VZ6 243 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 FAM20CQ8IXL6 584 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 ARMC10Q8N2F6 343 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 JMYQ8N9B5 988 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 PPP1R13LQ8WUF5 828 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 SLC6A18Q96N87 628 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 DPH2Q9BQC3 489 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 PRDM10Q9NQV6 1147 aa6.46□□□□□ -1.38
CDC42BPA-211ENST00000466538 CYP7A1P22680 504 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 RXRBP28702 533 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 ETV3P41162 512 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 RNF4P78317 190 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 LETMD1Q6P1Q0 360 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 CLEC10AQ8IUN9 316 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 LILRB2Q8N423 598 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 DNAJB8Q8NHS0 232 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 KLHL6Q8WZ60 621 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 VWCEQ96DN2 955 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 MEGF10Q96KG7 1140 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 COX4I2Q96KJ9 171 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 RNPC3Q96LT9 517 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 FBXL18Q96ME1 805 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 PCDHB10Q9UN67 800 aa6.45□□□□□ -1.38
CDC42BPA-211ENST00000466538 KRBA1A5PL33 1030 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 ANKRD34BA5PLL1 514 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 IQCA1LA6NCM1 817 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 B2RBV5 119 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 ENPP3O14638 875 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 SLITRK5O94991 958 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 LONRF2Q1L5Z9 754 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 NBPF12Q5TAG4 269 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 EGFLAMQ63HQ2 1017 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 MRM1Q6IN84 353 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 NLGN1Q8N2Q7 840 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 XAGE3Q8WTP9 111 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 THAP3Q8WTV1 239 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 SGSM3Q96HU1 749 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 APBA2Q99767 749 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 FAM83CQ9BQN1 747 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 SSBP4Q9BWG4 385 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 ZMYM5Q9UJ78 669 aa6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 MRPL42Q9Y6G3 142 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-211ENST00000466538 FAM86C2PA6NEL3 165 aa6.43□□□□□ -1.38
CDC42BPA-211ENST00000466538 SUSD5O60279 629 aa6.43□□□□□ -1.38
CDC42BPA-211ENST00000466538 TCEAL1Q15170 157 aa6.43□□□□□ -1.38
CDC42BPA-211ENST00000466538 NFKBIBQ15653 356 aa6.43□□□□□ -1.38
CDC42BPA-211ENST00000466538 ZC3H12BQ5HYM0 836 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-211ENST00000466538 LRRC47Q8N1G4 583 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-211ENST00000466538 KREMEN1Q96MU8 473 aa6.43□□□□□ -1.38
CDC42BPA-211ENST00000466538 MIPEPQ99797 713 aa6.43□□□□□ -1.38
CDC42BPA-211ENST00000466538 ASPNQ9BXN1 380 aa6.43□□□□□ -1.38
CDC42BPA-211ENST00000466538 C1GALT1Q9NS00 363 aa6.43□□□□□ -1.38
CDC42BPA-211ENST00000466538 COL17A1Q9UMD9 1497 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 A0A087WZG4 1122 aa6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 AGRPO00253 132 aa6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 SSRP1Q08945 709 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 BEND4Q6ZU67 534 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms