RNA–Protein interactions for RNA: ENST00000466185.1

PRPF4B-204, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,297 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-204ENST00000466185 C8orf86Q6ZUL3 223 aa8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 CYFIP1Q7L576 1253 aa8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 WFDC8Q8IUA0 241 aa8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 FAM178BQ8IXR5 827 aa8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 TAB3Q8N5C8 712 aaPredicted RBP8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 ZSCAN1Q8NBB4 408 aa8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 APPBP2Q92624 585 aa8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 WDR89Q96FK6 387 aaPredicted RBP8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 KLHDC7BQ96G42 594 aa8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 TACC3Q9Y6A5 838 aa8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 EIF2AK4Q9P2K8 1649 aaKnown RBP8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 BCORL1Q5H9F3 1711 aa8.32□□□□□ -1.08
PRPF4B-204ENST00000466185 NAIPQ13075 1403 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 UPK3BL1B0FP48 263 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 UPK3BL2E5RIL1 263 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 H3BM21 787 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 DNAJA2O60884 412 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 LIG1P18858 919 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 SQSTM1Q13501 440 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 OVOS1Q6IE37 1185 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 MRM1Q6IN84 353 aaKnown RBP8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 HOMER1Q86YM7 354 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 ELMO3Q96BJ8 720 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 COL25A1Q9BXS0 654 aaPredicted RBP8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 TMEM260Q9NX78 707 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 GMIPQ9P107 970 aa8.31□□□□□ -1.08
PRPF4B-204ENST00000466185 GCC2Q8IWJ2 1684 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 SLC22A31A6NKX4 558 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 DCDC2CA8MYV0 355 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 M0R082 166 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 ACRP10323 421 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 PLCG1P19174 1290 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 MLECQ14165 292 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 ZYXQ15942 572 aaKnown RBP8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 KIF4BQ2VIQ3 1234 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 MSL1Q68DK7 614 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 C1orf229Q6ZS94 237 aaPredicted RBP8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 SPATC1Q76KD6 591 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 KLHL23Q8NBE8 558 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 ZNF417Q8TAU3 575 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 ATG4CQ96DT6 458 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 ZNF587Q96SQ5 575 aaPredicted RBP8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 PFDN2Q9UHV9 154 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 LEMD3Q9Y2U8 911 aa8.3□□□□□ -1.08
PRPF4B-204ENST00000466185 ARID4BQ4LE39 1312 aaPredicted RBP8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 RNF17Q9BXT8 1623 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 KIF3BO15066 747 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 DIAPH1O60610 1272 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 NME1P15531 152 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 NLRP12P59046 1061 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 SUZ12Q15022 739 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 C2orf27AQ580R0 203 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 TMEM201Q5SNT2 666 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 UNC5AQ6ZN44 842 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 FILIP1Q7Z7B0 1213 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 NPAS3Q8IXF0 933 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 JMYQ8N9B5 988 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 GALNT11Q8NCW6 608 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 ST13P5Q8NFI4 369 aaPredicted RBP8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 ACDQ96AP0 544 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 CNNM2Q9H8M5 875 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 IFT57Q9NWB7 429 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 SLC12A7Q9Y666 1083 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 LTBP3Q9NS15 1303 aa8.29□□□□□ -1.08
PRPF4B-204ENST00000466185 LOC100289279A0A1B0GTE1 492 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 VSIG8P0DPA2 414 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 HNRNPUQ00839 825 aaKnown RBP eCLIP8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 SRSF11Q05519 484 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 PDE4BQ07343 736 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 SETDB1Q15047 1291 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 ZC3H12AQ5D1E8 599 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 CDCP2Q5VXM1 449 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 INTS3Q68E01 1043 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 NLRC3Q7RTR2 1065 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 KIAA0907Q7Z7F0 614 aaPredicted RBP8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 C12orf40Q86WS4 652 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 THAP3Q8WTV1 239 aaPredicted RBP8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 BRINP2Q9C0B6 783 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 ZMYM5Q9UJ78 669 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 CSADQ9Y600 493 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 DEPDC5O75140 1603 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 MROH1Q8NDA8 1641 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 PRDM15P57071 1507 aaPredicted RBP8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 FAM135AQ9P2D6 1515 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 SETD5Q9C0A6 1442 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 KDM2BQ8NHM5 1336 aa8.28□□□□□ -1.08
PRPF4B-204ENST00000466185 hCG_2014768A0A024R1R8 64 aa8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 PRAMEF27A3QJZ7 478 aa8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 TNFRSF10CO14798 259 aa8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 DDX3YO15523 660 aaKnown RBP8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 ADAM11O75078 769 aa8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 DLGAP3O95886 979 aa8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 GRK4P32298 578 aa8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 IGBP1P78318 339 aa8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 C16orf86Q6ZW13 317 aa8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 CHSY3Q70JA7 882 aa8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 ILDR2Q71H61 639 aa8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 SLC9A7Q96T83 725 aa8.27□□□□□ -1.09
PRPF4B-204ENST00000466185 WDR18Q9BV38 432 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms