RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 PTPRAP18433 802 aa13.44□□□□□ -0.26
TMCO1-204ENST00000465705 MAP2K2P36507 400 aa13.44□□□□□ -0.26
TMCO1-204ENST00000465705 PPATQ06203 517 aa13.44□□□□□ -0.26
TMCO1-204ENST00000465705 PPARAQ07869 468 aa13.44□□□□□ -0.26
TMCO1-204ENST00000465705 ALX1Q15699 326 aa13.44□□□□□ -0.26
TMCO1-204ENST00000465705 CERKLQ49MI3 558 aaPredicted RBP13.44□□□□□ -0.26
TMCO1-204ENST00000465705 C16orf86Q6ZW13 317 aa13.44□□□□□ -0.26
TMCO1-204ENST00000465705 STK11IPQ8N1F8 1099 aa13.44□□□□□ -0.26
TMCO1-204ENST00000465705 DSCC1Q9BVC3 393 aa13.44□□□□□ -0.26
TMCO1-204ENST00000465705 ZNF287Q9HBT7 754 aa13.44□□□□□ -0.26
TMCO1-204ENST00000465705 MYH8P13535 1937 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 PPP1R37O75864 691 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 FGAP02671 866 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 GJA5P36382 358 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 CDK8P49336 464 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 PPIL2Q13356 520 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 RRP1BQ14684 758 aaKnown RBP13.43□□□□□ -0.26
TMCO1-204ENST00000465705 ABCB5Q2M3G0 1257 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 ESYT1Q9BSJ8 1104 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 CABP5Q9NP86 173 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 GINM1Q9NU53 330 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.43□□□□□ -0.26
TMCO1-204ENST00000465705 ZBTB21Q9ULJ3 1066 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 GTF3C3Q9Y5Q9 886 aa13.43□□□□□ -0.26
TMCO1-204ENST00000465705 MANSC4A6NHS7 340 aaPredicted RBP13.42□□□□□ -0.26
TMCO1-204ENST00000465705 MPHOSPH10O00566 681 aaKnown RBP13.42□□□□□ -0.26
TMCO1-204ENST00000465705 IRF6O14896 467 aa13.42□□□□□ -0.26
TMCO1-204ENST00000465705 SNPHO15079 494 aa13.42□□□□□ -0.26
TMCO1-204ENST00000465705 GH2P01242 217 aa13.42□□□□□ -0.26
TMCO1-204ENST00000465705 KIF23Q02241 960 aaPredicted RBP13.42□□□□□ -0.26
TMCO1-204ENST00000465705 PDE4BQ07343 736 aa13.42□□□□□ -0.26
TMCO1-204ENST00000465705 SREBF2Q12772 1141 aa13.42□□□□□ -0.26
TMCO1-204ENST00000465705 KIAA1211Q6ZU35 1233 aa13.42□□□□□ -0.26
TMCO1-204ENST00000465705 CCDC17Q96LX7 622 aa13.42□□□□□ -0.26
TMCO1-204ENST00000465705 MKNK2Q9HBH9 465 aa13.42□□□□□ -0.26
TMCO1-204ENST00000465705 AS3MTQ9HBK9 375 aa13.42□□□□□ -0.26
TMCO1-204ENST00000465705 CTNNA3Q9UI47 895 aa13.42□□□□□ -0.26
TMCO1-204ENST00000465705 ZHX2Q9Y6X8 837 aa13.42□□□□□ -0.26
TMCO1-204ENST00000465705 USP17L5A8MUK1 530 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 GTF2A2P52657 109 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 HAND2P61296 217 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 SNAPC2Q13487 334 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 RAB3GAP1Q15042 981 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 IMMTQ16891 758 aaKnown RBP13.41□□□□□ -0.26
TMCO1-204ENST00000465705 SHROOM1Q2M3G4 852 aaPredicted RBP13.41□□□□□ -0.26
TMCO1-204ENST00000465705 IFFO2Q5TF58 517 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 TMEM179Q6ZVK1 233 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 CCDC84Q86UT8 332 aaPredicted RBP13.41□□□□□ -0.26
TMCO1-204ENST00000465705 JMYQ8N9B5 988 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 ZIC5Q96T25 663 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 TBC1D2Q9BYX2 928 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 ANAPC4Q9UJX5 808 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 LAMA4Q16363 1823 aa13.41□□□□□ -0.26
TMCO1-204ENST00000465705 TRIM75PA6NK02 468 aa13.4□□□□□ -0.26
TMCO1-204ENST00000465705 ZNF213O14771 459 aa13.4□□□□□ -0.26
TMCO1-204ENST00000465705 PRDM1O75626 825 aa13.4□□□□□ -0.26
TMCO1-204ENST00000465705 AKR1B1P15121 316 aa13.4□□□□□ -0.26
TMCO1-204ENST00000465705 JAG1P78504 1218 aa13.4□□□□□ -0.26
TMCO1-204ENST00000465705 MAP2K1Q02750 393 aaPredicted RBP13.4□□□□□ -0.26
TMCO1-204ENST00000465705 CTDSPL2Q05D32 466 aa13.4□□□□□ -0.26
TMCO1-204ENST00000465705 ANO2Q9NQ90 1003 aa13.4□□□□□ -0.26
TMCO1-204ENST00000465705 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.26
TMCO1-204ENST00000465705 KCNH4Q9UQ05 1017 aa13.4□□□□□ -0.26
TMCO1-204ENST00000465705 CCL15-CCL14A0A0B4J2E2 113 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 CXCL11O14625 94 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 CETPP11597 493 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 RASA1P20936 1047 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 INHBEP58166 350 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 PTH1RQ03431 593 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 SPP2Q13103 211 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 SEPT2Q15019 361 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 CCL15Q16663 113 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 ZNF444Q8N0Y2 327 aaPredicted RBP13.39□□□□□ -0.27
TMCO1-204ENST00000465705 ZNF280CQ8ND82 737 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 FEZ1Q99689 392 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 BEGAINQ9BUH8 593 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 RNF41Q9H4P4 317 aaPredicted RBP13.39□□□□□ -0.27
TMCO1-204ENST00000465705 TOMM22Q9NS69 142 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 AFG3L2Q9Y4W6 797 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 PHIPQ8WWQ0 1821 aa13.39□□□□□ -0.27
TMCO1-204ENST00000465705 PCP11498 1178 aaKnown RBP13.38□□□□□ -0.27
TMCO1-204ENST00000465705 AKNAD1Q5T1N1 836 aa13.38□□□□□ -0.27
TMCO1-204ENST00000465705 MFSD6Q6ZSS7 791 aa13.38□□□□□ -0.27
TMCO1-204ENST00000465705 TBC1D10CQ8IV04 446 aa13.38□□□□□ -0.27
TMCO1-204ENST00000465705 STAG1Q8WVM7 1258 aa13.38□□□□□ -0.27
TMCO1-204ENST00000465705 WDR18Q9BV38 432 aa13.38□□□□□ -0.27
TMCO1-204ENST00000465705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMCO1-204ENST00000465705 A0A0G2JLL6 359 aaPredicted RBP13.37□□□□□ -0.27
TMCO1-204ENST00000465705 TSPY2A6NKD2 308 aa13.37□□□□□ -0.27
TMCO1-204ENST00000465705 ORC4O43929 436 aa13.37□□□□□ -0.27
TMCO1-204ENST00000465705 TSPY3P0CV98 308 aa13.37□□□□□ -0.27
TMCO1-204ENST00000465705 TSPY8P0CW00 308 aa13.37□□□□□ -0.27
TMCO1-204ENST00000465705 GUCY1A2P33402 732 aa13.37□□□□□ -0.27
TMCO1-204ENST00000465705 TM4SF4P48230 202 aa13.37□□□□□ -0.27
TMCO1-204ENST00000465705 ICA1Q05084 483 aa13.37□□□□□ -0.27
TMCO1-204ENST00000465705 MTMR2Q13614 643 aa13.37□□□□□ -0.27
TMCO1-204ENST00000465705 RRP12Q5JTH9 1297 aaKnown RBP13.37□□□□□ -0.27
TMCO1-204ENST00000465705 OTUD7BQ6GQQ9 843 aa13.37□□□□□ -0.27
TMCO1-204ENST00000465705 PRRT2Q7Z6L0 340 aaPredicted RBP13.37□□□□□ -0.27
TMCO1-204ENST00000465705 BRI3BPQ8WY22 251 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms