RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 CAP2P40123 477 aa12.04□□□□□ -0.48
USP39-212ENST00000465514 ADGRE1Q14246 886 aa12.04□□□□□ -0.48
USP39-212ENST00000465514 RRP1BQ14684 758 aaKnown RBP12.04□□□□□ -0.48
USP39-212ENST00000465514 ARRDC4Q8NCT1 418 aa12.04□□□□□ -0.48
USP39-212ENST00000465514 EDC3Q96F86 508 aaKnown RBP12.04□□□□□ -0.48
USP39-212ENST00000465514 EPHX3Q9H6B9 360 aa12.04□□□□□ -0.48
USP39-212ENST00000465514 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
USP39-212ENST00000465514 DENND2AQ9ULE3 1009 aa12.04□□□□□ -0.48
USP39-212ENST00000465514 HDAC5Q9UQL6 1122 aa12.04□□□□□ -0.48
USP39-212ENST00000465514 SALL1Q9NSC2 1324 aa12.04□□□□□ -0.48
USP39-212ENST00000465514 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
USP39-212ENST00000465514 WDFY4Q6ZS81 3184 aa12.04□□□□□ -0.48
USP39-212ENST00000465514 SMCHD1A6NHR9 2005 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 SEMA3EO15041 775 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 BMP1P13497 986 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 ADORA1P30542 326 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 PBX2P40425 430 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 ADCYAP1R1P41586 468 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 ATP2B2Q01814 1243 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 TLE2Q04725 743 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 FPGSQ05932 587 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 TMEM31Q5JXX7 168 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 ANO1Q5XXA6 986 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 FERMT2Q96AC1 680 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 MEIS3Q99687 375 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 AS3MTQ9HBK9 375 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 COPRSQ9NQ92 184 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 CDK5RAP2Q96SN8 1893 aa12.03□□□□□ -0.48
USP39-212ENST00000465514 CLTBP09497 229 aa12.02□□□□□ -0.49
USP39-212ENST00000465514 CYBAP13498 195 aa12.02□□□□□ -0.49
USP39-212ENST00000465514 IGFBP4P22692 258 aa12.02□□□□□ -0.49
USP39-212ENST00000465514 BTDP43251 543 aa12.02□□□□□ -0.49
USP39-212ENST00000465514 BACE1P56817 501 aa12.02□□□□□ -0.49
USP39-212ENST00000465514 TIMM10P62072 90 aa12.02□□□□□ -0.49
USP39-212ENST00000465514 TFF2Q03403 129 aa12.02□□□□□ -0.49
USP39-212ENST00000465514 WDR78Q5VTH9 848 aa12.02□□□□□ -0.49
USP39-212ENST00000465514 CCDC102BQ68D86 513 aa12.02□□□□□ -0.49
USP39-212ENST00000465514 PBX4Q9BYU1 374 aa12.02□□□□□ -0.49
USP39-212ENST00000465514 CXXC1Q9P0U4 656 aaPredicted RBP12.02□□□□□ -0.49
USP39-212ENST00000465514 CACNA1AO00555 2505 aa12.02□□□□□ -0.49
USP39-212ENST00000465514 GRXCR1A8MXD5 290 aa12.01□□□□□ -0.49
USP39-212ENST00000465514 GLRX3O76003 335 aaKnown RBP12.01□□□□□ -0.49
USP39-212ENST00000465514 RAG1P15918 1043 aa12.01□□□□□ -0.49
USP39-212ENST00000465514 KCNQ1P51787 676 aa12.01□□□□□ -0.49
USP39-212ENST00000465514 RARSP54136 660 aaKnown RBP12.01□□□□□ -0.49
USP39-212ENST00000465514 C1orf53Q5VUE5 145 aa12.01□□□□□ -0.49
USP39-212ENST00000465514 CCDC129Q6ZRS4 1044 aa12.01□□□□□ -0.49
USP39-212ENST00000465514 DZIP1Q86YF9 867 aaKnown RBP12.01□□□□□ -0.49
USP39-212ENST00000465514 ZGPATQ8N5A5 531 aaKnown RBP12.01□□□□□ -0.49
USP39-212ENST00000465514 NPLOC4Q8TAT6 608 aa12.01□□□□□ -0.49
USP39-212ENST00000465514 GTF3C2Q8WUA4 911 aaPredicted RBP12.01□□□□□ -0.49
USP39-212ENST00000465514 WDR18Q9BV38 432 aa12.01□□□□□ -0.49
USP39-212ENST00000465514 TACC3Q9Y6A5 838 aa12.01□□□□□ -0.49
USP39-212ENST00000465514 FOCADQ5VW36 1801 aa12□□□□□ -0.49
USP39-212ENST00000465514 FAM86C2PA6NEL3 165 aa12□□□□□ -0.49
USP39-212ENST00000465514 SLC15A5A6NIM6 579 aa12□□□□□ -0.49
USP39-212ENST00000465514 KIAA0355O15063 1070 aa12□□□□□ -0.49
USP39-212ENST00000465514 HOXC6P09630 235 aa12□□□□□ -0.49
USP39-212ENST00000465514 PTPREP23469 700 aa12□□□□□ -0.49
USP39-212ENST00000465514 TFCP2Q12800 502 aa12□□□□□ -0.49
USP39-212ENST00000465514 RASGRF1Q13972 1273 aa12□□□□□ -0.49
USP39-212ENST00000465514 ARHGAP45Q92619 1136 aa12□□□□□ -0.49
USP39-212ENST00000465514 C11orf16Q9NQ32 467 aa12□□□□□ -0.49
USP39-212ENST00000465514 ABCF2Q9UG63 623 aa12□□□□□ -0.49
USP39-212ENST00000465514 PRRC2BQ5JSZ5 2229 aaKnown RBP12□□□□□ -0.49
USP39-212ENST00000465514 SRGAP3O43295 1099 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 PQBP1O60828 265 aaKnown RBP11.99□□□□□ -0.49
USP39-212ENST00000465514 CNMDO75829 334 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 IGHA2P01877 340 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 GNAI3P08754 354 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 RHBDL3P58872 404 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 GRB14Q14449 540 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 LRRC41Q15345 812 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 SHROOM1Q2M3G4 852 aaPredicted RBP11.99□□□□□ -0.49
USP39-212ENST00000465514 SPTY2D1Q68D10 685 aaPredicted RBP11.99□□□□□ -0.49
USP39-212ENST00000465514 SLF2Q8IX21 1173 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 MICALL1Q8N3F8 863 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 XAGE2Q96GT9 111 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.99□□□□□ -0.498e-7■■■□□ 16.6
USP39-212ENST00000465514 TSPYL2Q9H2G4 693 aaPredicted RBP11.99□□□□□ -0.49
USP39-212ENST00000465514 AKAP2Q9Y2D5 859 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 MROH7-TTC4A0A0A0MT08 1334 aa11.99□□□□□ -0.49
USP39-212ENST00000465514 PDS5AQ29RF7 1337 aaKnown RBP11.99□□□□□ -0.49
USP39-212ENST00000465514 ZNFX1Q9P2E3 1918 aaKnown RBP11.99□□□□□ -0.49
USP39-212ENST00000465514 A0A1B0GUL7 405 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 C19orf81C9J6K1 198 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 SEPT4O43236 478 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 MRE11P49959 708 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 CCNA1P78396 465 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 JAG1P78504 1218 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 MTX1Q13505 466 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 FAM47AQ5JRC9 791 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 FAM163AQ96GL9 167 aaPredicted RBP11.98□□□□□ -0.49
USP39-212ENST00000465514 NEUROD6Q96NK8 337 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 TMEM39AQ9NV64 488 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 RABGAP1Q9Y3P9 1069 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.98□□□□□ -0.49
USP39-212ENST00000465514 IVNS1ABPQ9Y6Y0 642 aa11.98□□□□□ -0.49
USP39-212ENST00000465514 USP17L10C9JJH3 530 aa11.97□□□□□ -0.49
USP39-212ENST00000465514 GPR37L1O60883 481 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms