RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 NACAP1Q9BZK3 213 aa15.61■□□□□ 0.09
COL28A1-206ENST00000465339 HELLSQ9NRZ9 838 aa15.61■□□□□ 0.09
COL28A1-206ENST00000465339 LOC285556D6RIA3 1793 aa15.6■□□□□ 0.09
COL28A1-206ENST00000465339 C17orf99Q6UX52 265 aa15.6■□□□□ 0.09
COL28A1-206ENST00000465339 RILPL2Q969X0 211 aa15.6■□□□□ 0.09
COL28A1-206ENST00000465339 ABHD8Q96I13 439 aa15.6■□□□□ 0.09
COL28A1-206ENST00000465339 CCDC17Q96LX7 622 aa15.6■□□□□ 0.09
COL28A1-206ENST00000465339 SEC62Q99442 399 aaKnown RBP15.6■□□□□ 0.09
COL28A1-206ENST00000465339 TMOD4Q9NZQ9 345 aa15.6■□□□□ 0.09
COL28A1-206ENST00000465339 CYP2D7A0A087X1C5 515 aa15.59■□□□□ 0.09
COL28A1-206ENST00000465339 CDK8P49336 464 aa15.59■□□□□ 0.09
COL28A1-206ENST00000465339 MTMR2Q13614 643 aa15.59■□□□□ 0.09
COL28A1-206ENST00000465339 KIF22Q14807 665 aa15.59■□□□□ 0.09
COL28A1-206ENST00000465339 RAB3GAP1Q15042 981 aa15.59■□□□□ 0.09
COL28A1-206ENST00000465339 SHROOM1Q2M3G4 852 aaPredicted RBP15.59■□□□□ 0.09
COL28A1-206ENST00000465339 C16orf86Q6ZW13 317 aa15.59■□□□□ 0.09
COL28A1-206ENST00000465339 IFNL3Q8IZI9 196 aa15.59■□□□□ 0.09
COL28A1-206ENST00000465339 ZNF579Q8NAF0 562 aaKnown RBP15.59■□□□□ 0.09
COL28A1-206ENST00000465339 BBXQ8WY36 941 aaPredicted RBP15.59■□□□□ 0.09
COL28A1-206ENST00000465339 DYNLL2Q96FJ2 89 aa15.59■□□□□ 0.09
COL28A1-206ENST00000465339 PNMA3Q9UL41 463 aa15.59■□□□□ 0.09
COL28A1-206ENST00000465339 MPHOSPH10O00566 681 aaKnown RBP15.58■□□□□ 0.08
COL28A1-206ENST00000465339 CYP2C8P10632 490 aa15.58■□□□□ 0.08
COL28A1-206ENST00000465339 TDO2P48775 406 aa15.58■□□□□ 0.08
COL28A1-206ENST00000465339 TREML2Q5T2D2 321 aa15.58■□□□□ 0.08
COL28A1-206ENST00000465339 USP17L2Q6R6M4 530 aa15.58■□□□□ 0.08
COL28A1-206ENST00000465339 TMEM179Q6ZVK1 233 aa15.58■□□□□ 0.08
COL28A1-206ENST00000465339 SLC44A5Q8NCS7 719 aa15.58■□□□□ 0.08
COL28A1-206ENST00000465339 CD99L2Q8TCZ2 262 aa15.58■□□□□ 0.08
COL28A1-206ENST00000465339 ADGRA2Q96PE1 1338 aa15.58■□□□□ 0.08
COL28A1-206ENST00000465339 MINDY4BA8MYZ0 360 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 OSBPP22059 807 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 HOXA7P31268 230 aaPredicted RBP15.57■□□□□ 0.08
COL28A1-206ENST00000465339 GUCY1A2P33402 732 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 USP14P54578 494 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 MCMDC2Q4G0Z9 681 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 PHF12Q96QT6 1004 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 KIAA1683Q9H0B3 1180 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 EFCC1Q9HA90 598 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 ZNF287Q9HBT7 754 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 EPB41L4AQ9HCS5 686 aaPredicted RBP15.57■□□□□ 0.08
COL28A1-206ENST00000465339 CPA4Q9UI42 421 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 TRIM17Q9Y577 477 aa15.57■□□□□ 0.08
COL28A1-206ENST00000465339 HIP1O00291 1037 aa15.56■□□□□ 0.08
COL28A1-206ENST00000465339 GNRH1P01148 92 aa15.56■□□□□ 0.08
COL28A1-206ENST00000465339 SDSP20132 328 aa15.56■□□□□ 0.08
COL28A1-206ENST00000465339 PDE4AP27815 886 aa15.56■□□□□ 0.08
COL28A1-206ENST00000465339 LACTBP83111 547 aaPredicted RBP15.56■□□□□ 0.08
COL28A1-206ENST00000465339 SEPT2Q15019 361 aa15.56■□□□□ 0.08
COL28A1-206ENST00000465339 FBXO46Q6PJ61 603 aaPredicted RBP15.56■□□□□ 0.08
COL28A1-206ENST00000465339 OTOP1Q7RTM1 612 aa15.56■□□□□ 0.08
COL28A1-206ENST00000465339 SMCR8Q8TEV9 937 aaPredicted RBP15.56■□□□□ 0.08
COL28A1-206ENST00000465339 FEZ1Q99689 392 aa15.56■□□□□ 0.08
COL28A1-206ENST00000465339 NAPBQ9H115 298 aa15.56■□□□□ 0.08
COL28A1-206ENST00000465339 ROBO3Q96MS0 1386 aa15.55■□□□□ 0.08
COL28A1-206ENST00000465339 SMIM22K7EJ46 135 aa15.55■□□□□ 0.08
COL28A1-206ENST00000465339 SLC3A2P08195 630 aaKnown RBP15.55■□□□□ 0.08
COL28A1-206ENST00000465339 BCRP11274 1271 aa15.55■□□□□ 0.08
COL28A1-206ENST00000465339 AKR1B1P15121 316 aa15.55■□□□□ 0.08
COL28A1-206ENST00000465339 GCLCP48506 637 aaPredicted RBP15.55■□□□□ 0.08
COL28A1-206ENST00000465339 MFAP1P55081 439 aaKnown RBP15.55■□□□□ 0.08
COL28A1-206ENST00000465339 C12orf42Q96LP6 360 aa15.55■□□□□ 0.08
COL28A1-206ENST00000465339 FAM227BQ96M60 508 aa15.55■□□□□ 0.08
COL28A1-206ENST00000465339 ASCC2Q9H1I8 757 aaPredicted RBP15.55■□□□□ 0.08
COL28A1-206ENST00000465339 MKNK2Q9HBH9 465 aa15.55■□□□□ 0.08
COL28A1-206ENST00000465339 EMILIN3Q9NT22 766 aa15.55■□□□□ 0.08
COL28A1-206ENST00000465339 IRX3P78415 501 aaPredicted RBP15.54■□□□□ 0.08
COL28A1-206ENST00000465339 NMIQ13287 307 aaPredicted RBP15.54■□□□□ 0.08
COL28A1-206ENST00000465339 ALX1Q15699 326 aa15.54■□□□□ 0.08
COL28A1-206ENST00000465339 CCDC129Q6ZRS4 1044 aa15.54■□□□□ 0.08
COL28A1-206ENST00000465339 ACER1Q8TDN7 264 aa15.54■□□□□ 0.08
COL28A1-206ENST00000465339 KANSL2Q9H9L4 492 aa15.54■□□□□ 0.08
COL28A1-206ENST00000465339 PTPN22Q9Y2R2 807 aa15.54■□□□□ 0.08
COL28A1-206ENST00000465339 MGAMO43451 1857 aa15.54■□□□□ 0.08
COL28A1-206ENST00000465339 A0A0D9SFI3 127 aa15.53■□□□□ 0.08
COL28A1-206ENST00000465339 GABBR2O75899 941 aa15.53■□□□□ 0.08
COL28A1-206ENST00000465339 PRMT2P55345 433 aa15.53■□□□□ 0.08
COL28A1-206ENST00000465339 PDE4BQ07343 736 aa15.53■□□□□ 0.08
COL28A1-206ENST00000465339 TTC22Q5TAA0 569 aa15.53■□□□□ 0.08
COL28A1-206ENST00000465339 ZNF444Q8N0Y2 327 aaPredicted RBP15.53■□□□□ 0.08
COL28A1-206ENST00000465339 SH2D4AQ9H788 454 aa15.53■□□□□ 0.08
COL28A1-206ENST00000465339 ARHGEF10LQ9HCE6 1279 aa15.53■□□□□ 0.08
COL28A1-206ENST00000465339 DIAPH3Q9NSV4 1193 aa15.53■□□□□ 0.08
COL28A1-206ENST00000465339 CCDC171Q6TFL3 1326 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 CCDC85CA6NKD9 419 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 USP17L15C9J2P7 530 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 USP17L13C9JLJ4 530 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 USP17L11C9JVI0 530 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 USP17L18D6R9N7 530 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 USP17L22D6RA61 530 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 USP17L17D6RBQ6 530 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 USP17L19D6RCP7 530 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 USP17L20D6RJB6 530 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 RASA1P20936 1047 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 HOXD10P28358 340 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 PPARAQ07869 468 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 USP17L24Q0WX57 530 aa15.52■□□□□ 0.08
COL28A1-206ENST00000465339 ZYXQ15942 572 aaKnown RBP15.52■□□□□ 0.08
COL28A1-206ENST00000465339 FAM110CQ1W6H9 321 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms