RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 RELL1Q8IUW5 271 aa5.65□□□□□ -1.5
GARNL3-213ENST00000464616 FAM13CQ8NE31 585 aa5.65□□□□□ -1.5
GARNL3-213ENST00000464616 BHLHE22Q8NFJ8 381 aaPredicted RBP5.65□□□□□ -1.5
GARNL3-213ENST00000464616 TMEM253P0C7T8 217 aa5.64□□□□□ -1.51
GARNL3-213ENST00000464616 TPP2P29144 1249 aaPredicted RBP5.64□□□□□ -1.51
GARNL3-213ENST00000464616 LTKP29376 864 aa5.64□□□□□ -1.51
GARNL3-213ENST00000464616 PRR23BQ6ZRT6 265 aa5.64□□□□□ -1.51
GARNL3-213ENST00000464616 MCATQ8IVS2 390 aaKnown RBP5.64□□□□□ -1.51
GARNL3-213ENST00000464616 FBXO15Q8NCQ5 510 aaPredicted RBP5.64□□□□□ -1.51
GARNL3-213ENST00000464616 MYLIPQ8WY64 445 aa5.64□□□□□ -1.51
GARNL3-213ENST00000464616 NOC4LQ9BVI4 516 aaKnown RBP5.64□□□□□ -1.51
GARNL3-213ENST00000464616 BCL11AQ9H165 835 aa5.64□□□□□ -1.51
GARNL3-213ENST00000464616 NSUN3Q9H649 340 aaKnown RBP5.64□□□□□ -1.51
GARNL3-213ENST00000464616 DCP1AQ9NPI6 582 aaPredicted RBP5.64□□□□□ -1.51
GARNL3-213ENST00000464616 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.64□□□□□ -1.51
GARNL3-213ENST00000464616 TMEM59LQ9UK28 342 aa5.64□□□□□ -1.51
GARNL3-213ENST00000464616 ADAM30Q9UKF2 790 aa5.64□□□□□ -1.51
GARNL3-213ENST00000464616 CEP131Q9UPN4 1083 aa5.64□□□□□ -1.51
GARNL3-213ENST00000464616 TLR6Q9Y2C9 796 aa5.64□□□□□ -1.51
GARNL3-213ENST00000464616 CNTNAP4Q9C0A0 1308 aa5.64□□□□□ -1.51
GARNL3-213ENST00000464616 TFE3P19532 575 aaPredicted RBP5.63□□□□□ -1.51
GARNL3-213ENST00000464616 MESP2Q0VG99 397 aa5.63□□□□□ -1.51
GARNL3-213ENST00000464616 MLECQ14165 292 aa5.63□□□□□ -1.51
GARNL3-213ENST00000464616 ASCC2Q9H1I8 757 aaPredicted RBP5.63□□□□□ -1.51
GARNL3-213ENST00000464616 EPB41L4BQ9H329 900 aa5.63□□□□□ -1.51
GARNL3-213ENST00000464616 DUSP13Q9UII6 198 aa5.63□□□□□ -1.51
GARNL3-213ENST00000464616 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
GARNL3-213ENST00000464616 SORBS3O60504 671 aa5.62□□□□□ -1.51
GARNL3-213ENST00000464616 GBP2P32456 591 aaPredicted RBP5.62□□□□□ -1.51
GARNL3-213ENST00000464616 ST13P50502 369 aaKnown RBP5.62□□□□□ -1.51
GARNL3-213ENST00000464616 DAB2P98082 770 aa5.62□□□□□ -1.51
GARNL3-213ENST00000464616 PWP1Q13610 501 aa5.62□□□□□ -1.51
GARNL3-213ENST00000464616 CLEC16AQ2KHT3 1053 aa5.62□□□□□ -1.51
GARNL3-213ENST00000464616 PHACTR4Q8IZ21 702 aa5.62□□□□□ -1.51
GARNL3-213ENST00000464616 OXR1Q8N573 874 aa5.62□□□□□ -1.51
GARNL3-213ENST00000464616 DHX38Q92620 1227 aaKnown RBP5.62□□□□□ -1.51
GARNL3-213ENST00000464616 ACSF2Q96CM8 615 aaPredicted RBP5.62□□□□□ -1.51
GARNL3-213ENST00000464616 VTI1BQ9UEU0 232 aa5.62□□□□□ -1.51
GARNL3-213ENST00000464616 DNAJC25-GNG10A0A024R161 153 aa5.61□□□□□ -1.51
GARNL3-213ENST00000464616 F6X3S4 739 aa5.61□□□□□ -1.51
GARNL3-213ENST00000464616 TSPAN15O95858 294 aa5.61□□□□□ -1.51
GARNL3-213ENST00000464616 GBP1P32455 592 aa5.61□□□□□ -1.51
GARNL3-213ENST00000464616 EGR3Q06889 387 aa5.61□□□□□ -1.51
GARNL3-213ENST00000464616 SNAP47Q5SQN1 464 aa5.61□□□□□ -1.51
GARNL3-213ENST00000464616 CCDC84Q86UT8 332 aaPredicted RBP5.61□□□□□ -1.51
GARNL3-213ENST00000464616 ARID1BQ8NFD5 2236 aaPredicted RBP5.61□□□□□ -1.51
GARNL3-213ENST00000464616 CYB5D2Q8WUJ1 264 aa5.61□□□□□ -1.51
GARNL3-213ENST00000464616 RNF19AQ9NV58 838 aa5.61□□□□□ -1.51
GARNL3-213ENST00000464616 KLHL3Q9UH77 587 aa5.61□□□□□ -1.51
GARNL3-213ENST00000464616 CORINQ9Y5Q5 1042 aa5.61□□□□□ -1.51
GARNL3-213ENST00000464616 TCAF2A6NFQ2 919 aa5.6□□□□□ -1.51
GARNL3-213ENST00000464616 CAMK2GQ13555 558 aaPredicted RBP5.6□□□□□ -1.51
GARNL3-213ENST00000464616 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
GARNL3-213ENST00000464616 RALGPS1Q5JS13 557 aa5.6□□□□□ -1.51
GARNL3-213ENST00000464616 PHC3Q8NDX5 983 aa5.6□□□□□ -1.51
GARNL3-213ENST00000464616 KCNN1Q92952 543 aa5.6□□□□□ -1.51
GARNL3-213ENST00000464616 FAM161BQ96MY7 647 aa5.6□□□□□ -1.51
GARNL3-213ENST00000464616 ADAMTS10Q9H324 1103 aa5.6□□□□□ -1.51
GARNL3-213ENST00000464616 SSU72P8A0A1W2PR75 194 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 MINDY4BA8MYZ0 360 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 UPK3BL1B0FP48 263 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 UPK3BL2E5RIL1 263 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 PF4P02776 101 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 ESR1P03372 595 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 LMNB2Q03252 620 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 FBLN7Q53RD9 439 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 BNC2Q6ZN30 1099 aaPredicted RBP5.59□□□□□ -1.51
GARNL3-213ENST00000464616 TMC4Q7Z404 712 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 SPPL2CQ8IUH8 684 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 LRRC56Q8IYG6 542 aaPredicted RBP5.59□□□□□ -1.51
GARNL3-213ENST00000464616 GATAD2BQ8WXI9 593 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 CRELD1Q96HD1 420 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 CCDC74BQ96LY2 380 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 C19orf73Q9NVV2 129 aa5.59□□□□□ -1.51
GARNL3-213ENST00000464616 USP31Q70CQ4 1352 aa5.58□□□□□ -1.52
GARNL3-213ENST00000464616 TMEM132EQ6IEE7 984 aa5.58□□□□□ -1.52
GARNL3-213ENST00000464616 TSPYL5Q86VY4 417 aaPredicted RBP5.58□□□□□ -1.52
GARNL3-213ENST00000464616 DTWD2Q8NBA8 298 aa5.58□□□□□ -1.52
GARNL3-213ENST00000464616 PDZD8Q8NEN9 1154 aa5.58□□□□□ -1.52
GARNL3-213ENST00000464616 DNAJB8Q8NHS0 232 aa5.58□□□□□ -1.52
GARNL3-213ENST00000464616 RNF141Q8WVD5 230 aa5.58□□□□□ -1.52
GARNL3-213ENST00000464616 Q96M66 194 aa5.58□□□□□ -1.52
GARNL3-213ENST00000464616 SLC26A8Q96RN1 970 aa5.58□□□□□ -1.52
GARNL3-213ENST00000464616 GPR62Q9BZJ7 368 aa5.58□□□□□ -1.52
GARNL3-213ENST00000464616 DUSP15Q9H1R2 295 aaPredicted RBP5.58□□□□□ -1.52
GARNL3-213ENST00000464616 WASH4PA8MWX3 477 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.57□□□□□ -1.52
GARNL3-213ENST00000464616 GRIN3BO60391 1043 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 CILPO75339 1184 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 F13A1P00488 732 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 HPXP02790 462 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 C1QTNF9P0C862 333 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 ERVFC1P60507 584 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 FAM160A1Q05DH4 1040 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 DUSP4Q13115 394 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 TMEM201Q5SNT2 666 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 CIAPIN1Q6FI81 312 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 LILRA2Q8N149 483 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 GOLM1Q8NBJ4 401 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 TMEM74Q96NL1 305 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms