RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 CHURC1Q8WUH1 139 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 LPAR1Q92633 364 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 KLRG1Q96E93 195 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 DYNLL2Q96FJ2 89 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 TEPSINQ96N21 525 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 STX8Q9UNK0 236 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 WDR90Q96KV7 1748 aa8.65□□□□□ -1.03
EPHA4-210ENST00000463446 TNKSO95271 1327 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 USP17L10C9JJH3 530 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 YY1P25490 414 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 SHMT1P34896 483 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 NOVP48745 357 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 PPATQ06203 517 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 RAB3GAP1Q15042 981 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 NOL9Q5SY16 702 aaKnown RBP8.64□□□□□ -1.03
EPHA4-210ENST00000463446 NBPF12Q5TAG4 269 aaPredicted RBP8.64□□□□□ -1.03
EPHA4-210ENST00000463446 FASTKD5Q7L8L6 764 aaKnown RBP8.64□□□□□ -1.03
EPHA4-210ENST00000463446 ERO1BQ86YB8 467 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 TBC1D10CQ8IV04 446 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 ZFPM1Q8IX07 1006 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 TRIM22Q8IYM9 498 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 SCYL3Q8IZE3 742 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 FANCBQ8NB91 859 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 BRF1Q92994 677 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 IPO9Q96P70 1041 aaKnown RBP8.64□□□□□ -1.03
EPHA4-210ENST00000463446 KIF2CQ99661 725 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 WDR18Q9BV38 432 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 UPF3BQ9BZI7 483 aaKnown RBP8.64□□□□□ -1.03
EPHA4-210ENST00000463446 CLIP2Q9UDT6 1046 aa8.64□□□□□ -1.03
EPHA4-210ENST00000463446 NAP1L2Q9ULW6 460 aaPredicted RBP8.64□□□□□ -1.03
EPHA4-210ENST00000463446 PLIN4Q96Q06 1357 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 CYP2D7A0A087X1C5 515 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 PHF20L1A8MW92 1017 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 CXCL11O14625 94 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 USP2O75604 605 aaPredicted RBP8.63□□□□□ -1.03
EPHA4-210ENST00000463446 PRDM1O75626 825 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 EGFRP00533 1210 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 PARP1P09874 1014 aaKnown RBP8.63□□□□□ -1.03
EPHA4-210ENST00000463446 CYP2D6P10635 497 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 METAP2P50579 478 aaKnown RBP eCLIP8.63□□□□□ -1.03
EPHA4-210ENST00000463446 AK2P54819 239 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 ICA1Q05084 483 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 ASPRV1Q53RT3 343 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 FAM47AQ5JRC9 791 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 SH3BP5LQ7L8J4 393 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 STK11IPQ8N1F8 1099 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 PNMA1Q8ND90 353 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 GMCL1P1Q8NEA9 526 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 DCAF4Q8WV16 495 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 CCDC102AQ96A19 550 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 CDCA5Q96FF9 252 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 HHIPL1Q96JK4 782 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 WRNIP1Q96S55 665 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 MAF1Q9H063 256 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 GLT8D2Q9H1C3 349 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 TSHZ2Q9NRE2 1034 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 TMOD4Q9NZQ9 345 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 PCDHAC2Q9Y5I4 1007 aa8.63□□□□□ -1.03
EPHA4-210ENST00000463446 MYO5AQ9Y4I1 1855 aaKnown RBP8.63□□□□□ -1.03
EPHA4-210ENST00000463446 NEDD4P46934 1319 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 KLF18A0A0U1RQI7 1052 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 SHTN1A0MZ66 631 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 SH2B2O14492 632 aaPredicted RBP8.62□□□□□ -1.03
EPHA4-210ENST00000463446 PLA2G6O60733 806 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 PFKFB2O60825 505 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 GH2P01242 217 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 EEF2P13639 858 aaKnown RBP8.62□□□□□ -1.03
EPHA4-210ENST00000463446 PDIA3P30101 505 aaKnown RBP8.62□□□□□ -1.03
EPHA4-210ENST00000463446 SLC1A4P43007 532 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 SEC23AQ15436 765 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 OTUD7BQ6GQQ9 843 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 USP17L2Q6R6M4 530 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 CHRDL2Q6WN34 429 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 STOX1Q6ZVD7 989 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 FAM160B2Q86V87 743 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 ZNF654Q8IZM8 581 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 ENAHQ8N8S7 591 aaPredicted RBP8.62□□□□□ -1.03
EPHA4-210ENST00000463446 ZNF280CQ8ND82 737 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.62□□□□□ -1.03
EPHA4-210ENST00000463446 CCDC12Q8WUD4 166 aaPredicted RBP8.62□□□□□ -1.03
EPHA4-210ENST00000463446 CEP95Q96GE4 821 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 FEZ1Q99689 392 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 NBPF3Q9H094 633 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 KIAA1683Q9H0B3 1180 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 LY9Q9HBG7 655 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 GBA2Q9HCG7 927 aaPredicted RBP8.62□□□□□ -1.03
EPHA4-210ENST00000463446 IL17RBQ9NRM6 502 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 HOXC10Q9NYD6 342 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 ZBTB21Q9ULJ3 1066 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 TMX2Q9Y320 296 aa8.62□□□□□ -1.03
EPHA4-210ENST00000463446 CTDP1Q9Y5B0 961 aaPredicted RBP8.62□□□□□ -1.03
EPHA4-210ENST00000463446 TIAM2Q8IVF5 1701 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 SRCAPQ6ZRS2 3230 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 MYH1P12882 1939 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 IGKV6D-41A0A0C4DH26 115 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 F5H6K3 240 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 hCG_1984214I3L0E3 225 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 AKR1B1P15121 316 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 PTPRAP18433 802 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 GTF2A2P52657 109 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms