RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 TBC1D12O60347 775 aa16.88■□□□□ 0.29
C9orf3-211ENST00000463372 FAM178BQ8IXR5 827 aa16.88■□□□□ 0.29
C9orf3-211ENST00000463372 TRIOO75962 3097 aa16.88■□□□□ 0.29
C9orf3-211ENST00000463372 A0A1W2PQ45 241 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-211ENST00000463372 A0A1W2PQY0 241 aa16.87■□□□□ 0.29
C9orf3-211ENST00000463372 RFXAPO00287 272 aa16.87■□□□□ 0.29
C9orf3-211ENST00000463372 RABGGTBP53611 331 aa16.87■□□□□ 0.29
C9orf3-211ENST00000463372 FAM47AQ5JRC9 791 aa16.87■□□□□ 0.29
C9orf3-211ENST00000463372 RNF180Q86T96 592 aa16.87■□□□□ 0.29
C9orf3-211ENST00000463372 MROH5Q6ZUA9 1318 aa16.87■□□□□ 0.29
C9orf3-211ENST00000463372 BAHCC1Q9P281 2608 aa16.86■□□□□ 0.29
C9orf3-211ENST00000463372 BACE1P56817 501 aa16.86■□□□□ 0.29
C9orf3-211ENST00000463372 GRB14Q14449 540 aa16.86■□□□□ 0.29
C9orf3-211ENST00000463372 OLFML2BQ68BL8 750 aa16.86■□□□□ 0.29
C9orf3-211ENST00000463372 HFE2Q6ZVN8 426 aa16.86■□□□□ 0.29
C9orf3-211ENST00000463372 DPP9Q86TI2 863 aa16.86■□□□□ 0.29
C9orf3-211ENST00000463372 TBX21Q9UL17 535 aa16.86■□□□□ 0.29
C9orf3-211ENST00000463372 RABGAP1Q9Y3P9 1069 aa16.86■□□□□ 0.29
C9orf3-211ENST00000463372 PCDHA11Q9Y5I1 949 aa16.86■□□□□ 0.29
C9orf3-211ENST00000463372 EPG5Q9HCE0 2579 aa16.86■□□□□ 0.29
C9orf3-211ENST00000463372 RIF1Q5UIP0 2472 aaKnown RBP16.85■□□□□ 0.29
C9orf3-211ENST00000463372 FAM196BA6NMK8 535 aa16.85■□□□□ 0.29
C9orf3-211ENST00000463372 FGBP02675 491 aa16.85■□□□□ 0.29
C9orf3-211ENST00000463372 CAP2P40123 477 aa16.85■□□□□ 0.29
C9orf3-211ENST00000463372 PICALMQ13492 652 aa16.85■□□□□ 0.29
C9orf3-211ENST00000463372 EPHA10Q5JZY3 1008 aa16.85■□□□□ 0.29
C9orf3-211ENST00000463372 KRT40Q6A162 431 aa16.85■□□□□ 0.29
C9orf3-211ENST00000463372 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
C9orf3-211ENST00000463372 PUS3Q9BZE2 481 aaKnown RBP16.85■□□□□ 0.29
C9orf3-211ENST00000463372 XPNPEP3Q9NQH7 507 aa16.85■□□□□ 0.29
C9orf3-211ENST00000463372 DCHS1Q96JQ0 3298 aa16.84■□□□□ 0.29
C9orf3-211ENST00000463372 C19orf81C9J6K1 198 aa16.84■□□□□ 0.29
C9orf3-211ENST00000463372 IGHA2P01877 340 aa16.84■□□□□ 0.29
C9orf3-211ENST00000463372 LDHBP07195 334 aaKnown RBP16.84■□□□□ 0.29
C9orf3-211ENST00000463372 RARBP10826 455 aa16.84■□□□□ 0.29
C9orf3-211ENST00000463372 MYOGP15173 224 aa16.84■□□□□ 0.29
C9orf3-211ENST00000463372 SAMD1Q6SPF0 538 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-211ENST00000463372 LINS1Q8NG48 757 aa16.84■□□□□ 0.29
C9orf3-211ENST00000463372 ANKS1AQ92625 1134 aa16.84■□□□□ 0.29
C9orf3-211ENST00000463372 WDR18Q9BV38 432 aa16.84■□□□□ 0.29
C9orf3-211ENST00000463372 IL23AQ9NPF7 189 aa16.84■□□□□ 0.29
C9orf3-211ENST00000463372 STARD7Q9NQZ5 370 aa16.84■□□□□ 0.29
C9orf3-211ENST00000463372 FAM186AA6NE01 2351 aa16.83■□□□□ 0.28
C9orf3-211ENST00000463372 KRT37O76014 449 aa16.83■□□□□ 0.28
C9orf3-211ENST00000463372 PRDX5P30044 214 aa16.83■□□□□ 0.28
C9orf3-211ENST00000463372 MROH7Q68CQ1 1323 aa16.83■□□□□ 0.28
C9orf3-211ENST00000463372 C8orf58Q8NAV2 365 aa16.83■□□□□ 0.28
C9orf3-211ENST00000463372 PRSS33Q8NF86 280 aa16.83■□□□□ 0.28
C9orf3-211ENST00000463372 NUP133Q8WUM0 1156 aa16.83■□□□□ 0.28
C9orf3-211ENST00000463372 PRRX2Q99811 253 aa16.83■□□□□ 0.28
C9orf3-211ENST00000463372 CERS4Q9HA82 394 aa16.83■□□□□ 0.28
C9orf3-211ENST00000463372 TRIM26Q12899 539 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-211ENST00000463372 PRAMEF19Q5SWL8 479 aa16.82■□□□□ 0.28
C9orf3-211ENST00000463372 OTOP2Q7RTS6 562 aa16.82■□□□□ 0.28
C9orf3-211ENST00000463372 PPP1R12CQ9BZL4 782 aa16.82■□□□□ 0.28
C9orf3-211ENST00000463372 SLC4A7Q9Y6M7 1214 aa16.82■□□□□ 0.28
C9orf3-211ENST00000463372 CACNA1HO95180 2353 aa16.82■□□□□ 0.28
C9orf3-211ENST00000463372 RFX7Q2KHR2 1363 aa16.81■□□□□ 0.28
C9orf3-211ENST00000463372 POTEB3A0JP26 581 aa16.81■□□□□ 0.28
C9orf3-211ENST00000463372 PGK1P00558 417 aa16.81■□□□□ 0.28
C9orf3-211ENST00000463372 METTL24Q5JXM2 366 aa16.81■□□□□ 0.28
C9orf3-211ENST00000463372 POTEBQ6S5H4 581 aa16.81■□□□□ 0.28
C9orf3-211ENST00000463372 CCDC146Q8IYE0 955 aa16.81■□□□□ 0.28
C9orf3-211ENST00000463372 DDX4Q9NQI0 724 aaKnown RBP16.81■□□□□ 0.28
C9orf3-211ENST00000463372 ZNF236Q9UL36 1845 aa16.81■□□□□ 0.28
C9orf3-211ENST00000463372 PKD1L2Q7Z442 2459 aa16.8■□□□□ 0.28
C9orf3-211ENST00000463372 ZNFX1Q9P2E3 1918 aaKnown RBP16.8■□□□□ 0.28
C9orf3-211ENST00000463372 USP17L10C9JJH3 530 aa16.8■□□□□ 0.28
C9orf3-211ENST00000463372 CNMDO75829 334 aa16.8■□□□□ 0.28
C9orf3-211ENST00000463372 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
C9orf3-211ENST00000463372 DNAAF4Q8WXU2 420 aa16.8■□□□□ 0.28
C9orf3-211ENST00000463372 SLC5A4Q9NY91 659 aa16.8■□□□□ 0.28
C9orf3-211ENST00000463372 ZNF853P0CG23 659 aa16.79■□□□□ 0.28
C9orf3-211ENST00000463372 GNAI1P63096 354 aa16.79■□□□□ 0.28
C9orf3-211ENST00000463372 TMEM67Q5HYA8 995 aa16.79■□□□□ 0.28
C9orf3-211ENST00000463372 KIF16BQ96L93 1317 aa16.78■□□□□ 0.28
C9orf3-211ENST00000463372 TPRP12270 2363 aaKnown RBP16.78■□□□□ 0.28
C9orf3-211ENST00000463372 PDE8BO95263 885 aa16.78■□□□□ 0.28
C9orf3-211ENST00000463372 CA3P07451 260 aa16.78■□□□□ 0.28
C9orf3-211ENST00000463372 ASNSP08243 561 aa16.78■□□□□ 0.28
C9orf3-211ENST00000463372 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
C9orf3-211ENST00000463372 ADORA2AP29274 412 aa16.78■□□□□ 0.28
C9orf3-211ENST00000463372 LEXMQ3ZCV2 418 aa16.78■□□□□ 0.28
C9orf3-211ENST00000463372 G2E3Q7L622 706 aa16.78■□□□□ 0.28
C9orf3-211ENST00000463372 ARNTL2Q8WYA1 636 aa16.78■□□□□ 0.28
C9orf3-211ENST00000463372 TSEN34Q9BSV6 310 aaKnown RBP16.78■□□□□ 0.28
C9orf3-211ENST00000463372 IFT57Q9NWB7 429 aa16.78■□□□□ 0.28
C9orf3-211ENST00000463372 KMT2BQ9UMN6 2715 aaPredicted RBP16.78■□□□□ 0.28
C9orf3-211ENST00000463372 CACNA1FO60840 1977 aa16.78■□□□□ 0.28
C9orf3-211ENST00000463372 GAKO14976 1311 aa16.77■□□□□ 0.28
C9orf3-211ENST00000463372 EPOPA6NHQ4 379 aa16.77■□□□□ 0.28
C9orf3-211ENST00000463372 STRNO43815 780 aa16.77■□□□□ 0.28
C9orf3-211ENST00000463372 IL9P15248 144 aa16.77■□□□□ 0.28
C9orf3-211ENST00000463372 ATP2A2P16615 1042 aaKnown RBP16.77■□□□□ 0.28
C9orf3-211ENST00000463372 ACLYP53396 1101 aa16.77■□□□□ 0.28
C9orf3-211ENST00000463372 RRP1BQ14684 758 aaKnown RBP16.77■□□□□ 0.28
C9orf3-211ENST00000463372 UBE2ZQ9H832 354 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-211ENST00000463372 ZNF536O15090 1300 aa16.76■□□□□ 0.27
C9orf3-211ENST00000463372 CLSPNQ9HAW4 1339 aa16.76■□□□□ 0.27
C9orf3-211ENST00000463372 ZBBXA8MT70 800 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms