RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 PTPN22Q9Y2R2 807 aa10.34□□□□□ -0.75
TMEM254-208ENST00000463209 PTCH2Q9Y6C5 1203 aa10.34□□□□□ -0.75
TMEM254-208ENST00000463209 USP17L10C9JJH3 530 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 ZFYP08048 801 aaPredicted RBP10.33□□□□□ -0.76
TMEM254-208ENST00000463209 ATXN8OSP0DMR3 200 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 BCRP11274 1271 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 PSMC4P43686 418 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 NMIQ13287 307 aaPredicted RBP10.33□□□□□ -0.76
TMEM254-208ENST00000463209 SH3D19Q5HYK7 790 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 KIAA1755Q5JYT7 1200 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 C16orf86Q6ZW13 317 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 PROCA1Q8NCQ7 364 aaPredicted RBP10.33□□□□□ -0.76
TMEM254-208ENST00000463209 SH3TC2Q8TF17 1288 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 EVI5LQ96CN4 794 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 DDRGK1Q96HY6 314 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 CABP5Q9NP86 173 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 TMOD4Q9NZQ9 345 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 HTTP42858 3142 aa10.33□□□□□ -0.76
TMEM254-208ENST00000463209 GREB1LQ9C091 1923 aaPredicted RBP10.33□□□□□ -0.76
TMEM254-208ENST00000463209 FMNL1O95466 1100 aaPredicted RBP10.32□□□□□ -0.76
TMEM254-208ENST00000463209 VCAM1P19320 739 aa10.32□□□□□ -0.76
TMEM254-208ENST00000463209 OSBPP22059 807 aa10.32□□□□□ -0.76
TMEM254-208ENST00000463209 IRX3P78415 501 aaPredicted RBP10.32□□□□□ -0.76
TMEM254-208ENST00000463209 ATP2B2Q01814 1243 aa10.32□□□□□ -0.76
TMEM254-208ENST00000463209 KIF22Q14807 665 aa10.32□□□□□ -0.76
TMEM254-208ENST00000463209 USP17L2Q6R6M4 530 aa10.32□□□□□ -0.76
TMEM254-208ENST00000463209 POTEEQ6S8J3 1075 aa10.32□□□□□ -0.76
TMEM254-208ENST00000463209 ZNF589Q86UQ0 364 aaPredicted RBP10.32□□□□□ -0.76
TMEM254-208ENST00000463209 AMOTL1Q8IY63 956 aa10.32□□□□□ -0.76
TMEM254-208ENST00000463209 IFNL3Q8IZI9 196 aa10.32□□□□□ -0.76
TMEM254-208ENST00000463209 SPICE1Q8N0Z3 855 aa10.32□□□□□ -0.76
TMEM254-208ENST00000463209 P2RX7Q99572 595 aaKnown RBP10.32□□□□□ -0.76
TMEM254-208ENST00000463209 TXNRD2Q9NNW7 524 aa10.32□□□□□ -0.76
TMEM254-208ENST00000463209 INCENPQ9NQS7 918 aa10.32□□□□□ -0.76
TMEM254-208ENST00000463209 ARPP21Q9UBL0 812 aaPredicted RBP10.32□□□□□ -0.76
TMEM254-208ENST00000463209 ROBO3Q96MS0 1386 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 RAD21O60216 631 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 ICA1Q05084 483 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 PRKCZQ05513 592 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 CTDSPL2Q05D32 466 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 PKN2Q16513 984 aaKnown RBP10.31□□□□□ -0.76
TMEM254-208ENST00000463209 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
TMEM254-208ENST00000463209 SIAH1Q8IUQ4 282 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 CHMP4CQ96CF2 233 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 PAGR1Q9BTK6 254 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.31□□□□□ -0.76
TMEM254-208ENST00000463209 TBC1D2Q9BYX2 928 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 SWAP70Q9UH65 585 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 PNMA3Q9UL41 463 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 TAOK2Q9UL54 1235 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 GABRQQ9UN88 632 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 SLC45A1Q9Y2W3 748 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 TACC3Q9Y6A5 838 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 MYPNQ86TC9 1320 aa10.31□□□□□ -0.76
TMEM254-208ENST00000463209 PLXNB2O15031 1838 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 C19orf81C9J6K1 198 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
TMEM254-208ENST00000463209 GSPT1P15170 499 aaKnown RBP10.3□□□□□ -0.76
TMEM254-208ENST00000463209 GNAT2P19087 354 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 RASA1P20936 1047 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 FCGRTP55899 365 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 HERVK_113P62684 666 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 LRRFIP1Q32MZ4 808 aaKnown RBP10.3□□□□□ -0.76
TMEM254-208ENST00000463209 SBK1Q52WX2 424 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 TMEM179Q6ZVK1 233 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 KIAA1683Q9H0B3 1180 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 NAPBQ9H115 298 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 RPAP3Q9H6T3 665 aaPredicted RBP10.3□□□□□ -0.76
TMEM254-208ENST00000463209 GINM1Q9NU53 330 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 PARP14Q460N5 1801 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 A0A0G2JMZ2 1700 aa10.3□□□□□ -0.76
TMEM254-208ENST00000463209 EEF2P13639 858 aaKnown RBP10.29□□□□□ -0.76
TMEM254-208ENST00000463209 SDSP20132 328 aa10.29□□□□□ -0.76
TMEM254-208ENST00000463209 PPARAQ07869 468 aa10.29□□□□□ -0.76
TMEM254-208ENST00000463209 PABPC4Q13310 644 aaKnown RBP eCLIP10.29□□□□□ -0.76
TMEM254-208ENST00000463209 FAM47AQ5JRC9 791 aa10.29□□□□□ -0.76
TMEM254-208ENST00000463209 CWC27Q6UX04 472 aaKnown RBP10.29□□□□□ -0.76
TMEM254-208ENST00000463209 C12orf42Q96LP6 360 aa10.29□□□□□ -0.76
TMEM254-208ENST00000463209 TANGO6Q9C0B7 1094 aa10.29□□□□□ -0.76
TMEM254-208ENST00000463209 IL25Q9H293 177 aa10.29□□□□□ -0.76
TMEM254-208ENST00000463209 MKNK2Q9HBH9 465 aa10.29□□□□□ -0.76
TMEM254-208ENST00000463209 RBPJLQ9UBG7 517 aa10.29□□□□□ -0.76
TMEM254-208ENST00000463209 RLFQ13129 1914 aa10.29□□□□□ -0.76
TMEM254-208ENST00000463209 MYH4Q9Y623 1939 aa10.29□□□□□ -0.76
TMEM254-208ENST00000463209 POTEFA5A3E0 1075 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 TNPO2O14787 897 aaKnown RBP10.28□□□□□ -0.76
TMEM254-208ENST00000463209 CNMDO75829 334 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 ELNP15502 786 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 HOXA7P31268 230 aaPredicted RBP10.28□□□□□ -0.76
TMEM254-208ENST00000463209 HAND2P61296 217 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 FAM110CQ1W6H9 321 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 Q3C1V9 767 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 SLC9C1Q4G0N8 1177 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 MCMDC2Q4G0Z9 681 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 TTC22Q5TAA0 569 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 GIMAP6Q6P9H5 292 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 LRRC47Q8N1G4 583 aaKnown RBP10.28□□□□□ -0.76
TMEM254-208ENST00000463209 NKX2-3Q8TAU0 364 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 RAET1EQ8TD07 263 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 NUP88Q99567 741 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms