RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 ARMT1Q9H993 441 aa6.92□□□□□ -1.3
CCR9-205ENST00000463197 AS3MTQ9HBK9 375 aa6.92□□□□□ -1.3
CCR9-205ENST00000463197 DCP1AQ9NPI6 582 aaPredicted RBP6.92□□□□□ -1.3
CCR9-205ENST00000463197 SERPINB13Q9UIV8 391 aa6.92□□□□□ -1.3
CCR9-205ENST00000463197 PNMA3Q9UL41 463 aa6.92□□□□□ -1.3
CCR9-205ENST00000463197 OGDHLQ9ULD0 1010 aa6.92□□□□□ -1.3
CCR9-205ENST00000463197 GTF3C3Q9Y5Q9 886 aa6.92□□□□□ -1.3
CCR9-205ENST00000463197 ZBED9Q6R2W3 1325 aa6.92□□□□□ -1.3
CCR9-205ENST00000463197 RPTORQ8N122 1335 aa6.92□□□□□ -1.3
CCR9-205ENST00000463197 KIAA0100Q14667 2235 aaKnown RBP6.92□□□□□ -1.3
CCR9-205ENST00000463197 MYO5AQ9Y4I1 1855 aaKnown RBP6.92□□□□□ -1.3
CCR9-205ENST00000463197 PTPRFP10586 1907 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 LOC285556D6RIA3 1793 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 MAGEB6P1A0A0J9YX57 407 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 GOLIM4O00461 696 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 IGSF3O75054 1194 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 HMGCRP04035 888 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 XRCC5P13010 732 aaKnown RBP6.91□□□□□ -1.3
CCR9-205ENST00000463197 PRKAR2AP13861 404 aaKnown RBP6.91□□□□□ -1.3
CCR9-205ENST00000463197 AKR1B1P15121 316 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 SYN1P17600 705 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 VCAM1P19320 739 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 MAP3K12Q12852 859 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 RAB3GAP1Q15042 981 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 ABCB5Q2M3G0 1257 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 CERKLQ49MI3 558 aaPredicted RBP6.91□□□□□ -1.3
CCR9-205ENST00000463197 RPAP2Q8IXW5 612 aaPredicted RBP6.91□□□□□ -1.3
CCR9-205ENST00000463197 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.91□□□□□ -1.3
CCR9-205ENST00000463197 LRCH3Q96II8 777 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 DNAJC2Q99543 621 aaKnown RBP6.91□□□□□ -1.3
CCR9-205ENST00000463197 GDF15Q99988 308 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 NOL10Q9BSC4 688 aaKnown RBP6.91□□□□□ -1.3
CCR9-205ENST00000463197 PAGR1Q9BTK6 254 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 KIAA1683Q9H0B3 1180 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 PUS7LQ9H0K6 701 aaKnown RBP6.91□□□□□ -1.3
CCR9-205ENST00000463197 BCL11AQ9H165 835 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 TMOD4Q9NZQ9 345 aa6.91□□□□□ -1.3
CCR9-205ENST00000463197 SPDYE16A6NNV3 312 aaPredicted RBP6.9□□□□□ -1.3
CCR9-205ENST00000463197 USP17L15C9J2P7 530 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 USP17L13C9JLJ4 530 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 USP17L11C9JVI0 530 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 USP17L18D6R9N7 530 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 USP17L22D6RA61 530 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 USP17L17D6RBQ6 530 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 USP17L19D6RCP7 530 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 USP17L20D6RJB6 530 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 COBLO75128 1261 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 ATP5JP18859 108 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 PTPREP23469 700 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 ADD2P35612 726 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 IRX3P78415 501 aaPredicted RBP6.9□□□□□ -1.3
CCR9-205ENST00000463197 USP17L24Q0WX57 530 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 PABPC4Q13310 644 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCR9-205ENST00000463197 LRRC26Q2I0M4 334 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 LBX2Q6XYB7 198 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 PLEKHH3Q7Z736 793 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 KIF1BPQ96EK5 621 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 HAUS7Q99871 368 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 NUDT12Q9BQG2 462 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 RPAP3Q9H6T3 665 aaPredicted RBP6.9□□□□□ -1.3
CCR9-205ENST00000463197 HMX1Q9NP08 348 aaPredicted RBP6.9□□□□□ -1.3
CCR9-205ENST00000463197 GINM1Q9NU53 330 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 ZMYND8Q9ULU4 1186 aaPredicted RBP6.9□□□□□ -1.3
CCR9-205ENST00000463197 RABGAP1Q9Y3P9 1069 aa6.9□□□□□ -1.3
CCR9-205ENST00000463197 MGAMO43451 1857 aa6.9□□□□□ -1.31
CCR9-205ENST00000463197 AK9Q5TCS8 1911 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 UNC80Q8N2C7 3258 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 CDH23Q9H251 3354 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 USP17L12C9JPN9 530 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 USP17L21D6R901 530 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 EVI5O60447 810 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 MBD4O95243 580 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 POLR3DP05423 398 aaPredicted RBP6.89□□□□□ -1.31
CCR9-205ENST00000463197 HLA-DOAP06340 250 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 CYP2C19P33261 490 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 MAP2K5Q13163 448 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 PRAMEF19Q5SWL8 479 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 C12orf60Q5U649 245 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 TSHZ3Q63HK5 1081 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 CTR9Q6PD62 1173 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 NECAB2Q7Z6G3 386 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 TTC6Q86TZ1 520 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 ERC1Q8IUD2 1116 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 C7orf61Q8IZ16 206 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 HTATIP2Q9BUP3 242 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 MOV10L1Q9BXT6 1211 aaKnown RBP6.89□□□□□ -1.31
CCR9-205ENST00000463197 PAG1Q9NWQ8 432 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 MCM9Q9NXL9 1143 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 ADAMTS5Q9UNA0 930 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 VCANP13611 3396 aa6.89□□□□□ -1.31
CCR9-205ENST00000463197 DOCK3Q8IZD9 2030 aa6.88□□□□□ -1.31
CCR9-205ENST00000463197 CDK5RAP2Q96SN8 1893 aa6.88□□□□□ -1.31
CCR9-205ENST00000463197 HOXC6P09630 235 aa6.88□□□□□ -1.31
CCR9-205ENST00000463197 MAPK4P31152 587 aa6.88□□□□□ -1.31
CCR9-205ENST00000463197 BMP8BP34820 402 aa6.88□□□□□ -1.31
CCR9-205ENST00000463197 CDK8P49336 464 aa6.88□□□□□ -1.31
CCR9-205ENST00000463197 GRB14Q14449 540 aa6.88□□□□□ -1.31
CCR9-205ENST00000463197 TMEM132BQ14DG7 1078 aa6.88□□□□□ -1.31
CCR9-205ENST00000463197 ANO1Q5XXA6 986 aa6.88□□□□□ -1.31
CCR9-205ENST00000463197 SPICE1Q8N0Z3 855 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms