RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 RUFY2Q8WXA3 655 aa19.82■□□□□ 0.76
HLA-DPA1-245ENST00000463066 DSCC1Q9BVC3 393 aa19.82■□□□□ 0.76
HLA-DPA1-245ENST00000463066 EMILIN3Q9NT22 766 aa19.82■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ANAPC4Q9UJX5 808 aa19.82■□□□□ 0.76
HLA-DPA1-245ENST00000463066 TAOK2Q9UL54 1235 aa19.82■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ZMYM6O95789 1325 aa19.81■□□□□ 0.76
HLA-DPA1-245ENST00000463066 USP17L10C9JJH3 530 aa19.81■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ALDH1A1P00352 501 aa19.81■□□□□ 0.76
HLA-DPA1-245ENST00000463066 CYP2C8P10632 490 aa19.81■□□□□ 0.76
HLA-DPA1-245ENST00000463066 SH3D19Q5HYK7 790 aa19.81■□□□□ 0.76
HLA-DPA1-245ENST00000463066 FEZ1Q99689 392 aa19.81■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ESYT1Q9BSJ8 1104 aa19.81■□□□□ 0.76
HLA-DPA1-245ENST00000463066 TBC1D2Q9BYX2 928 aa19.81■□□□□ 0.76
HLA-DPA1-245ENST00000463066 PCNTO95613 3336 aa19.81■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ATP2B2Q01814 1243 aa19.8■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ICA1Q05084 483 aa19.8■□□□□ 0.76
HLA-DPA1-245ENST00000463066 KIAA1755Q5JYT7 1200 aa19.8■□□□□ 0.76
HLA-DPA1-245ENST00000463066 FASTKD5Q7L8L6 764 aaKnown RBP19.8■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ZNF444Q8N0Y2 327 aaPredicted RBP19.8■□□□□ 0.76
HLA-DPA1-245ENST00000463066 GPR25O00155 361 aa19.79■□□□□ 0.76
HLA-DPA1-245ENST00000463066 CDC45O75419 566 aa19.79■□□□□ 0.76
HLA-DPA1-245ENST00000463066 SLC3A2P08195 630 aaKnown RBP19.79■□□□□ 0.76
HLA-DPA1-245ENST00000463066 EEF2P13639 858 aaKnown RBP19.79■□□□□ 0.76
HLA-DPA1-245ENST00000463066 TFAP4Q01664 338 aa19.79■□□□□ 0.76
HLA-DPA1-245ENST00000463066 PDE4BQ07343 736 aa19.79■□□□□ 0.76
HLA-DPA1-245ENST00000463066 CFHR5Q9BXR6 569 aa19.79■□□□□ 0.76
HLA-DPA1-245ENST00000463066 AGTPBP1Q9UPW5 1226 aa19.79■□□□□ 0.76
HLA-DPA1-245ENST00000463066 TAF6LQ9Y6J9 622 aa19.79■□□□□ 0.76
HLA-DPA1-245ENST00000463066 IGKV6D-41A0A0C4DH26 115 aa19.78■□□□□ 0.76
HLA-DPA1-245ENST00000463066 RRP12Q5JTH9 1297 aaKnown RBP19.78■□□□□ 0.76
HLA-DPA1-245ENST00000463066 USP17L2Q6R6M4 530 aa19.78■□□□□ 0.76
HLA-DPA1-245ENST00000463066 PROCA1Q8NCQ7 364 aaPredicted RBP19.78■□□□□ 0.76
HLA-DPA1-245ENST00000463066 NEDD1Q8NHV4 660 aa19.78■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ZNF296Q8WUU4 475 aaPredicted RBP19.78■□□□□ 0.76
HLA-DPA1-245ENST00000463066 KIAA1683Q9H0B3 1180 aa19.78■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ZFYVE28Q9HCC9 887 aa19.78■□□□□ 0.76
HLA-DPA1-245ENST00000463066 TOMM22Q9NS69 142 aa19.78■□□□□ 0.76
HLA-DPA1-245ENST00000463066 TMOD4Q9NZQ9 345 aa19.78■□□□□ 0.76
HLA-DPA1-245ENST00000463066 PTPRFP10586 1907 aa19.78■□□□□ 0.76
HLA-DPA1-245ENST00000463066 NEDD4P46934 1319 aa19.77■□□□□ 0.76
HLA-DPA1-245ENST00000463066 C19orf81C9J6K1 198 aa19.77■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ZNF213O14771 459 aa19.77■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ORC4O43929 436 aa19.77■□□□□ 0.76
HLA-DPA1-245ENST00000463066 NMT2O60551 498 aa19.77■□□□□ 0.76
HLA-DPA1-245ENST00000463066 FGRP09769 529 aa19.77■□□□□ 0.76
HLA-DPA1-245ENST00000463066 COL13A1Q5TAT6 717 aaPredicted RBP19.77■□□□□ 0.76
HLA-DPA1-245ENST00000463066 LSG1Q9H089 658 aaKnown RBP19.77■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ZCCHC17Q9NP64 241 aaKnown RBP19.77■□□□□ 0.76
HLA-DPA1-245ENST00000463066 CPA4Q9UI42 421 aa19.77■□□□□ 0.76
HLA-DPA1-245ENST00000463066 ADGRA2Q96PE1 1338 aa19.76■□□□□ 0.75
HLA-DPA1-245ENST00000463066 RANBP6O60518 1105 aaKnown RBP19.76■□□□□ 0.75
HLA-DPA1-245ENST00000463066 ECM2O94769 699 aaPredicted RBP19.76■□□□□ 0.75
HLA-DPA1-245ENST00000463066 TSPY3P0CV98 308 aa19.76■□□□□ 0.75
HLA-DPA1-245ENST00000463066 TSPY8P0CW00 308 aa19.76■□□□□ 0.75
HLA-DPA1-245ENST00000463066 CAP1Q01518 475 aa19.76■□□□□ 0.75
HLA-DPA1-245ENST00000463066 AKNAD1Q5T1N1 836 aa19.76■□□□□ 0.75
HLA-DPA1-245ENST00000463066 CEP95Q96GE4 821 aa19.76■□□□□ 0.75
HLA-DPA1-245ENST00000463066 KANSL2Q9H9L4 492 aa19.76■□□□□ 0.75
HLA-DPA1-245ENST00000463066 ZNF287Q9HBT7 754 aa19.76■□□□□ 0.75
HLA-DPA1-245ENST00000463066 PRDM10Q9NQV6 1147 aa19.76■□□□□ 0.75
HLA-DPA1-245ENST00000463066 PEX10O60683 326 aa19.75■□□□□ 0.75
HLA-DPA1-245ENST00000463066 VCAM1P19320 739 aa19.75■□□□□ 0.75
HLA-DPA1-245ENST00000463066 SPICE1Q8N0Z3 855 aa19.75■□□□□ 0.75
HLA-DPA1-245ENST00000463066 STAG1Q8WVM7 1258 aa19.75■□□□□ 0.75
HLA-DPA1-245ENST00000463066 C12orf42Q96LP6 360 aa19.75■□□□□ 0.75
HLA-DPA1-245ENST00000463066 ASCC2Q9H1I8 757 aaPredicted RBP19.75■□□□□ 0.75
HLA-DPA1-245ENST00000463066 ARHGEF10LQ9HCE6 1279 aa19.75■□□□□ 0.75
HLA-DPA1-245ENST00000463066 CTNNA3Q9UI47 895 aa19.75■□□□□ 0.75
HLA-DPA1-245ENST00000463066 TMX2Q9Y320 296 aa19.75■□□□□ 0.75
HLA-DPA1-245ENST00000463066 RBM8AQ9Y5S9 174 aaKnown RBP19.75■□□□□ 0.75
HLA-DPA1-245ENST00000463066 LOC285556D6RIA3 1793 aa19.75■□□□□ 0.75
HLA-DPA1-245ENST00000463066 MYH8P13535 1937 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 GREB1LQ9C091 1923 aaPredicted RBP19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 PLIN4Q96Q06 1357 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 TSPY2A6NKD2 308 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 TLR2O60603 784 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 CYP21A2P08686 494 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 IMMTQ16891 758 aaKnown RBP19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 MFSD6Q6ZSS7 791 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 LRRC47Q8N1G4 583 aaKnown RBP19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 MAP4K1Q92918 833 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 PARK7Q99497 189 aaKnown RBP19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 ANO2Q9NQ90 1003 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 IL17RBQ9NRM6 502 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 MTMR4Q9NYA4 1195 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 CLIP2Q9UDT6 1046 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 SLC45A1Q9Y2W3 748 aa19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 U3KPZ7 1027 aaPredicted RBP19.74■□□□□ 0.75
HLA-DPA1-245ENST00000463066 FKTNO75072 461 aa19.73■□□□□ 0.75
HLA-DPA1-245ENST00000463066 USP14P54578 494 aa19.73■□□□□ 0.75
HLA-DPA1-245ENST00000463066 POTEEQ6S8J3 1075 aa19.73■□□□□ 0.75
HLA-DPA1-245ENST00000463066 C17orf99Q6UX52 265 aa19.73■□□□□ 0.75
HLA-DPA1-245ENST00000463066 CHMP4CQ96CF2 233 aa19.73■□□□□ 0.75
HLA-DPA1-245ENST00000463066 P2RX7Q99572 595 aaKnown RBP19.73■□□□□ 0.75
HLA-DPA1-245ENST00000463066 RPAP3Q9H6T3 665 aaPredicted RBP19.73■□□□□ 0.75
HLA-DPA1-245ENST00000463066 VCPKMTQ9H867 229 aa19.73■□□□□ 0.75
HLA-DPA1-245ENST00000463066 NYAP2Q9P242 653 aa19.73■□□□□ 0.75
HLA-DPA1-245ENST00000463066 B4E1Z4 1266 aa19.72■□□□□ 0.75
HLA-DPA1-245ENST00000463066 RAD21O60216 631 aa19.72■□□□□ 0.75
HLA-DPA1-245ENST00000463066 KIAA1211Q6ZU35 1233 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms