RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 SFMBT2Q5VUG0 894 aa17.57■□□□□ 0.4
SMC4-204ENST00000462787 LINC00301Q8NCQ3 95 aa17.57■□□□□ 0.4
SMC4-204ENST00000462787 JPH2Q9BR39 696 aaPredicted RBP17.57■□□□□ 0.4
SMC4-204ENST00000462787 ARHGEF10O15013 1369 aa17.57■□□□□ 0.4
SMC4-204ENST00000462787 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
SMC4-204ENST00000462787 ZNF853P0CG23 659 aa17.57■□□□□ 0.4
SMC4-204ENST00000462787 PARP2Q9UGN5 583 aa17.57■□□□□ 0.4
SMC4-204ENST00000462787 RGS16O15492 202 aaPredicted RBP17.57■□□□□ 0.4
SMC4-204ENST00000462787 MBD4O95243 580 aa17.57■□□□□ 0.4
SMC4-204ENST00000462787 LARGE1O95461 756 aa17.57■□□□□ 0.4
SMC4-204ENST00000462787 C2CD5Q86YS7 1000 aa17.57■□□□□ 0.4
SMC4-204ENST00000462787 UBL4BQ8N7F7 174 aa17.57■□□□□ 0.4
SMC4-204ENST00000462787 ZKSCAN3Q9BRR0 538 aa17.57■□□□□ 0.4
SMC4-204ENST00000462787 CRACR2BQ8N4Y2 399 aaPredicted RBP17.56■□□□□ 0.4
SMC4-204ENST00000462787 HOMER3Q9NSC5 361 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 HOXC9P31274 260 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 CCDC152Q4G0S7 254 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 ALS2CLQ60I27 953 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 TRIM31Q9BZY9 425 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 V9GY48 417 aaPredicted RBP17.56■□□□□ 0.4
SMC4-204ENST00000462787 ABCC10Q5T3U5 1492 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 KLHL30Q0D2K2 578 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 ZNF827Q17R98 1081 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 HS2ST1Q7LGA3 356 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 ENOX1Q8TC92 643 aaKnown RBP17.56■□□□□ 0.4
SMC4-204ENST00000462787 RRP36Q96EU6 259 aaKnown RBP17.56■□□□□ 0.4
SMC4-204ENST00000462787 KCNJ14Q9UNX9 436 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 SAMM50Q9Y512 469 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 ZMYM6O95789 1325 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 FLOT1O75955 427 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 ATP2A2P16615 1042 aaKnown RBP17.56■□□□□ 0.4
SMC4-204ENST00000462787 CCDC144BQ3MJ40 725 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 CCDC63Q8NA47 563 aa17.56■□□□□ 0.4
SMC4-204ENST00000462787 GSTO1P78417 241 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 GOLGA8FQ08AF8 430 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 GOLGA8DPQ0D2H9 430 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 MCUR1Q96AQ8 359 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 COPB1P53618 953 aaKnown RBP17.55■□□□□ 0.4
SMC4-204ENST00000462787 RBL2Q08999 1139 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 RRAGAQ7L523 313 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 PEX26Q7Z412 305 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 BPIFA3Q9BQP9 254 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 KCNF1Q9H3M0 494 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 KIF3CO14782 793 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 SETSIPP0DME0 302 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 ARHGEF2Q92974 986 aaKnown RBP17.55■□□□□ 0.4
SMC4-204ENST00000462787 TACO1Q9BSH4 297 aaKnown RBP17.55■□□□□ 0.4
SMC4-204ENST00000462787 BLZF1Q9H2G9 400 aa17.55■□□□□ 0.4
SMC4-204ENST00000462787 BCORL1Q5H9F3 1711 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 SEPT6Q14141 434 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 CCDC110Q8TBZ0 833 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 GSDMAQ96QA5 445 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 SF3B2Q13435 895 aaKnown RBP17.54■□□□□ 0.4
SMC4-204ENST00000462787 GCKRQ14397 625 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 KLHL14Q9P2G3 628 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 CARMIL3Q8ND23 1372 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 CLTAP09496 248 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 TTC19Q6DKK2 380 aaPredicted RBP17.54■□□□□ 0.4
SMC4-204ENST00000462787 CHUKO15111 745 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 CETN3O15182 167 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 GTPBP6O43824 516 aaPredicted RBP17.54■□□□□ 0.4
SMC4-204ENST00000462787 TNFAIP3P21580 790 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 GYS2P54840 703 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 CCDC197Q8NCU1 140 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 PHF23Q9BUL5 403 aaPredicted RBP17.54■□□□□ 0.4
SMC4-204ENST00000462787 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
SMC4-204ENST00000462787 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 EPB41P11171 864 aaKnown RBP17.53■□□□□ 0.4
SMC4-204ENST00000462787 RBM5P52756 815 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMC4-204ENST00000462787 PHLDB2Q86SQ0 1253 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 CCDC170Q8IYT3 715 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 MIPOL1Q8TD10 442 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 XAGE2Q96GT9 111 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 CLIC6Q96NY7 704 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 GBP5Q96PP8 586 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 NAP1L4Q99733 375 aaKnown RBP17.53■□□□□ 0.4
SMC4-204ENST00000462787 HAUS7Q99871 368 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.53■□□□□ 0.4
SMC4-204ENST00000462787 STK38LQ9Y2H1 464 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.53■□□□□ 0.41e-8■■■■■ 54.3
SMC4-204ENST00000462787 KCTD16Q68DU8 428 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 PLBD2Q8NHP8 589 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 CSRNP2Q9H175 543 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 PLEKHA4Q9H4M7 779 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 EDC3Q96F86 508 aaKnown RBP17.53■□□□□ 0.4
SMC4-204ENST00000462787 VCX3BQ9H321 246 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 FAM207AQ9NSI2 230 aaPredicted RBP17.53■□□□□ 0.4
SMC4-204ENST00000462787 CEP170Q5SW79 1584 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 HSPD1P10809 573 aaKnown RBP17.53■□□□□ 0.4
SMC4-204ENST00000462787 SRLQ86TD4 932 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 FNBP4Q8N3X1 1017 aaPredicted RBP17.53■□□□□ 0.4
SMC4-204ENST00000462787 STAMQ92783 540 aa17.53■□□□□ 0.4
SMC4-204ENST00000462787 N4BP2L2Q92802 583 aaPredicted RBP17.53■□□□□ 0.4
SMC4-204ENST00000462787 PEX19P40855 299 aa17.52■□□□□ 0.4
SMC4-204ENST00000462787 DCAF17Q5H9S7 520 aaPredicted RBP17.52■□□□□ 0.4
SMC4-204ENST00000462787 TSNARE1Q96NA8 513 aa17.52■□□□□ 0.4
SMC4-204ENST00000462787 MYL10Q9BUA6 226 aa17.52■□□□□ 0.4
SMC4-204ENST00000462787 NDUFB9Q9Y6M9 179 aa17.52■□□□□ 0.4
SMC4-204ENST00000462787 TRPM2O94759 1503 aa17.52■□□□□ 0.4
SMC4-204ENST00000462787 A0A087WWV3 80 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms