RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 L1CAMP32004 1257 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 PCSK7Q16549 785 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 PRICKLE2Q7Z3G6 844 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 MRPL41Q8IXM3 137 aaKnown RBP4.02□□□□□ -1.77
SMC4-203ENST00000462668 SPICE1Q8N0Z3 855 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 SCLYQ96I15 445 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 RCC1LQ96I51 464 aaKnown RBP4.02□□□□□ -1.77
SMC4-203ENST00000462668 KLHL25Q9H0H3 589 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 BCCIPQ9P287 314 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMC4-203ENST00000462668 REV1Q9UBZ9 1251 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 EMC9Q9Y3B6 208 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 MECP2P51608 486 aaKnown RBP4.02□□□□□ -1.77
SMC4-203ENST00000462668 STAT4Q14765 748 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 PCBP1Q15365 356 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMC4-203ENST00000462668 MCATQ8IVS2 390 aaKnown RBP4.02□□□□□ -1.77
SMC4-203ENST00000462668 GPN3Q9UHW5 284 aaPredicted RBP4.02□□□□□ -1.77
SMC4-203ENST00000462668 A0A087WZG4 1122 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 KATNA1O75449 491 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 UBOX5O94941 541 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 FBXO21O94952 628 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 HSP90AA2PQ14568 343 aaPredicted RBP4.02□□□□□ -1.77
SMC4-203ENST00000462668 INPP5AQ14642 412 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 ARSJQ5FYB0 599 aaPredicted RBP4.02□□□□□ -1.77
SMC4-203ENST00000462668 YOD1Q5VVQ6 348 aaPredicted RBP4.02□□□□□ -1.77
SMC4-203ENST00000462668 B3GNT9Q6UX72 402 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 DDX46Q7L014 1031 aaKnown RBP4.02□□□□□ -1.77
SMC4-203ENST00000462668 GPBAR1Q8TDU6 330 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 PPP1R13LQ8WUF5 828 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 ACSF2Q96CM8 615 aaPredicted RBP4.02□□□□□ -1.77
SMC4-203ENST00000462668 HOOK2Q96ED9 719 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 AIFM3Q96NN9 605 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 PRR13Q9NZ81 148 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 NPFFR2Q9Y5X5 522 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 SOX1O00570 391 aaPredicted RBP4.01□□□□□ -1.77
SMC4-203ENST00000462668 RGS13O14921 159 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 EFCAB14O75071 495 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 LDHAP00338 332 aaKnown RBP4.01□□□□□ -1.77
SMC4-203ENST00000462668 F2P00734 622 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 PABPC1P11940 636 aaKnown RBP4.01□□□□□ -1.77
SMC4-203ENST00000462668 SPTY2D1Q68D10 685 aaPredicted RBP4.01□□□□□ -1.77
SMC4-203ENST00000462668 PKN3Q6P5Z2 889 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 STRBPQ96SI9 672 aaKnown RBP4.01□□□□□ -1.77
SMC4-203ENST00000462668 TERF2IPQ9NYB0 399 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 KLF15Q9UIH9 416 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 DNMT3LQ9UJW3 386 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 ATXN7L1Q9ULK2 861 aaPredicted RBP4.01□□□□□ -1.77
SMC4-203ENST00000462668 RPS6KL1Q9Y6S9 549 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 PRPF3O43395 683 aaKnown RBP4.01□□□□□ -1.77
SMC4-203ENST00000462668 GRIN3BO60391 1043 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 DBN1Q16643 649 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 ZNF227Q86WZ6 799 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 OBP2AQ9NY56 170 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 A0A0G2JS52 829 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 LPOP22079 712 aaPredicted RBP4.01□□□□□ -1.77
SMC4-203ENST00000462668 ZC3H12AQ5D1E8 599 aaKnown RBP4.01□□□□□ -1.77
SMC4-203ENST00000462668 ZNF468Q5VIY5 522 aaPredicted RBP4.01□□□□□ -1.77
SMC4-203ENST00000462668 CCDC136Q96JN2 1154 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 LPIN3Q9BQK8 851 aa4.01□□□□□ -1.77
SMC4-203ENST00000462668 PAX3P23760 479 aa4□□□□□ -1.77
SMC4-203ENST00000462668 SYCP2LQ5T4T6 812 aa4□□□□□ -1.77
SMC4-203ENST00000462668 KIAA1211LQ6NV74 962 aa4□□□□□ -1.77
SMC4-203ENST00000462668 ERAP2Q6P179 960 aa4□□□□□ -1.77
SMC4-203ENST00000462668 TOGARAM2Q6ZUX3 1019 aa4□□□□□ -1.77
SMC4-203ENST00000462668 PLPPR2Q96GM1 343 aa4□□□□□ -1.77
SMC4-203ENST00000462668 CCDC86Q9H6F5 360 aaKnown RBP4□□□□□ -1.77
SMC4-203ENST00000462668 ZIM2Q9NZV7 527 aa4□□□□□ -1.77
SMC4-203ENST00000462668 CORINQ9Y5Q5 1042 aa4□□□□□ -1.77
SMC4-203ENST00000462668 H3BRJ5 948 aa4□□□□□ -1.77
SMC4-203ENST00000462668 CTSBP07858 339 aa4□□□□□ -1.77
SMC4-203ENST00000462668 GABREP78334 506 aa4□□□□□ -1.77
SMC4-203ENST00000462668 C21orf62-AS1Q17RA5 79 aa4□□□□□ -1.77
SMC4-203ENST00000462668 INO80DQ53TQ3 878 aaPredicted RBP4□□□□□ -1.77
SMC4-203ENST00000462668 SLC35F1Q5T1Q4 408 aa4□□□□□ -1.77
SMC4-203ENST00000462668 TRIM59Q8IWR1 403 aa4□□□□□ -1.77
SMC4-203ENST00000462668 NUP88Q99567 741 aaPredicted RBP4□□□□□ -1.77
SMC4-203ENST00000462668 WNT10AQ9GZT5 417 aa4□□□□□ -1.77
SMC4-203ENST00000462668 NAGPAQ9UK23 515 aa4□□□□□ -1.77
SMC4-203ENST00000462668 DLX3O60479 287 aa4□□□□□ -1.77
SMC4-203ENST00000462668 PPP2R2AP63151 447 aa4□□□□□ -1.77
SMC4-203ENST00000462668 MAP4K2Q12851 820 aa4□□□□□ -1.77
SMC4-203ENST00000462668 GFOD2Q3B7J2 385 aa4□□□□□ -1.77
SMC4-203ENST00000462668 KRT25Q7Z3Z0 450 aa4□□□□□ -1.77
SMC4-203ENST00000462668 SLC52A2Q9HAB3 445 aa4□□□□□ -1.77
SMC4-203ENST00000462668 TRIM75PA6NK02 468 aa4□□□□□ -1.77
SMC4-203ENST00000462668 POU5F1BQ06416 359 aa4□□□□□ -1.77
SMC4-203ENST00000462668 BBS9Q3SYG4 887 aa4□□□□□ -1.77
SMC4-203ENST00000462668 PASD1Q8IV76 773 aa4□□□□□ -1.77
SMC4-203ENST00000462668 PNMA8BQ9ULN7 279 aaPredicted RBP4□□□□□ -1.77
SMC4-203ENST00000462668 APOBEC2Q9Y235 224 aaKnown RBP4□□□□□ -1.77
SMC4-203ENST00000462668 TNPO3Q9Y5L0 923 aaKnown RBP4□□□□□ -1.77
SMC4-203ENST00000462668 TCRBV16S1A1N1A0A5B0 115 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 ITGAVP06756 1048 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 CDC27P30260 824 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 MLC1Q15049 377 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 C20orf204Q6ZNR8 217 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 ARHGEF39Q8N4T4 335 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 ARPC5LQ9BPX5 153 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 WNT9AO14904 365 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 HRGP04196 525 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 KRT18P05783 430 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms