RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 C20orf204Q6ZNR8 217 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 BTLAQ7Z6A9 289 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 SSH1Q8WYL5 1049 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 BRIP1Q9BX63 1249 aa7.34□□□□□ -1.23
VPS36-202ENST00000462289 UTYO14607 1347 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 PTPRCP08575 1304 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 CCDC88AQ3V6T2 1871 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 PI4KAP2A4QPH2 592 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 A6NJR5 290 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 NID1P14543 1247 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 HOXA10P31260 410 aaPredicted RBP7.33□□□□□ -1.24
VPS36-202ENST00000462289 XP32Q5T750 250 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 SUSD4Q5VX71 490 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 RAB44Q7Z6P3 723 aaPredicted RBP7.33□□□□□ -1.24
VPS36-202ENST00000462289 PI4KAP1Q8N8J0 262 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 CCDC191Q8NCU4 936 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 NLGN2Q8NFZ4 835 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 SCG3Q8WXD2 468 aaKnown RBP7.33□□□□□ -1.24
VPS36-202ENST00000462289 ARHGAP45Q92619 1136 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 SETDB2Q96T68 719 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 STK31Q9BXU1 1019 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 PPP1R12CQ9BZL4 782 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 NIP7Q9Y221 180 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS36-202ENST00000462289 RTL9Q8NET4 1388 aa7.33□□□□□ -1.24
VPS36-202ENST00000462289 CDHR2Q9BYE9 1310 aa7.32□□□□□ -1.24
VPS36-202ENST00000462289 FAM196BA6NMK8 535 aa7.32□□□□□ -1.24
VPS36-202ENST00000462289 SRGNP10124 158 aa7.32□□□□□ -1.24
VPS36-202ENST00000462289 ITGB7P26010 798 aa7.32□□□□□ -1.24
VPS36-202ENST00000462289 RTN1Q16799 776 aa7.32□□□□□ -1.24
VPS36-202ENST00000462289 CRTC2Q53ET0 693 aaPredicted RBP7.32□□□□□ -1.24
VPS36-202ENST00000462289 BEND3Q5T5X7 828 aa7.32□□□□□ -1.24
VPS36-202ENST00000462289 LINS1Q8NG48 757 aa7.32□□□□□ -1.24
VPS36-202ENST00000462289 PLA2G12BQ9BX93 195 aa7.32□□□□□ -1.24
VPS36-202ENST00000462289 NYXQ9GZU5 481 aa7.32□□□□□ -1.24
VPS36-202ENST00000462289 ABCC4O15439 1325 aa7.31□□□□□ -1.24
VPS36-202ENST00000462289 DDX58O95786 925 aaKnown RBP7.31□□□□□ -1.24
VPS36-202ENST00000462289 PCCAP05165 728 aaPredicted RBP7.31□□□□□ -1.24
VPS36-202ENST00000462289 GATA4P43694 442 aa7.31□□□□□ -1.24
VPS36-202ENST00000462289 SF3B3Q15393 1217 aaKnown RBP7.31□□□□□ -1.24
VPS36-202ENST00000462289 PRRT3Q5FWE3 981 aa7.31□□□□□ -1.24
VPS36-202ENST00000462289 TPTE2Q6XPS3 522 aa7.31□□□□□ -1.24
VPS36-202ENST00000462289 C8orf86Q6ZUL3 223 aa7.31□□□□□ -1.24
VPS36-202ENST00000462289 CNBD1Q8NA66 436 aa7.31□□□□□ -1.24
VPS36-202ENST00000462289 ZBTB38Q8NAP3 1195 aaPredicted RBP7.31□□□□□ -1.24
VPS36-202ENST00000462289 DNAAF4Q8WXU2 420 aa7.31□□□□□ -1.24
VPS36-202ENST00000462289 DUOX1Q9NRD9 1551 aa7.31□□□□□ -1.24
VPS36-202ENST00000462289 DMGDHQ9UI17 866 aaKnown RBP7.31□□□□□ -1.24
VPS36-202ENST00000462289 MAP3K2Q9Y2U5 619 aa7.31□□□□□ -1.24
VPS36-202ENST00000462289 ZNF646O15015 1829 aaPredicted RBP7.31□□□□□ -1.24
VPS36-202ENST00000462289 PSME4Q14997 1843 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L15C9J2P7 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L10C9JJH3 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L13C9JLJ4 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L12C9JPN9 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L11C9JVI0 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L21D6R901 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L18D6R9N7 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L22D6RA61 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L17D6RBQ6 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L19D6RCP7 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L20D6RJB6 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 TGFBR3LH3BV60 316 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 ALDH1L1O75891 902 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 IGFBP4P22692 258 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 USP17L24Q0WX57 530 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 DPYDQ12882 1025 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 AIMP1Q12904 312 aaKnown RBP7.3□□□□□ -1.24
VPS36-202ENST00000462289 STYK1Q6J9G0 422 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 PPP1R42Q7Z4L9 355 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 NPM2Q86SE8 214 aaKnown RBP7.3□□□□□ -1.24
VPS36-202ENST00000462289 BHMTQ93088 406 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 CALR3Q96L12 384 aaKnown RBP7.3□□□□□ -1.24
VPS36-202ENST00000462289 UTP14AQ9BVJ6 771 aaKnown RBP7.3□□□□□ -1.24
VPS36-202ENST00000462289 BCS1LQ9Y276 419 aa7.3□□□□□ -1.24
VPS36-202ENST00000462289 SH3TC1Q8TE82 1336 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 KIF16BQ96L93 1317 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 TCERG1O14776 1098 aaKnown RBP7.29□□□□□ -1.24
VPS36-202ENST00000462289 DPEP1P16444 411 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 YBX3P16989 372 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS36-202ENST00000462289 GPTP24298 496 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 PDE6BP35913 854 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 DOC2BQ14184 412 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 GCKRQ14397 625 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 INTS3Q68E01 1043 aaKnown RBP7.29□□□□□ -1.24
VPS36-202ENST00000462289 NBPF5PQ86XG9 351 aaPredicted RBP7.29□□□□□ -1.24
VPS36-202ENST00000462289 ANKMY2Q8IV38 441 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 KAZALD1Q96I82 304 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 CRAMP1Q96RY5 1269 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 GSX2Q9BZM3 304 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 SPEF2Q9C093 1822 aa7.29□□□□□ -1.24
VPS36-202ENST00000462289 LTBP3Q9NS15 1303 aa7.28□□□□□ -1.24
VPS36-202ENST00000462289 F6X3S4 739 aa7.28□□□□□ -1.24
VPS36-202ENST00000462289 CSF1RP07333 972 aa7.28□□□□□ -1.24
VPS36-202ENST00000462289 NPR1P16066 1061 aa7.28□□□□□ -1.24
VPS36-202ENST00000462289 ST5P78524 1137 aa7.28□□□□□ -1.24
VPS36-202ENST00000462289 FKBP5Q13451 457 aaPredicted RBP7.28□□□□□ -1.24
VPS36-202ENST00000462289 CWF19L2Q2TBE0 894 aaKnown RBP7.28□□□□□ -1.24
VPS36-202ENST00000462289 RABL6Q3YEC7 729 aaPredicted RBP7.28□□□□□ -1.24
VPS36-202ENST00000462289 SYNE4Q8N205 404 aa7.28□□□□□ -1.24
VPS36-202ENST00000462289 MASTLQ96GX5 879 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms