RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 GALNT11Q8NCW6 608 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 PHC3Q8NDX5 983 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 KLHDC7BQ96G42 594 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 CORO1BQ9BR76 489 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 TRIM56Q9BRZ2 755 aaKnown RBP7.21□□□□□ -1.26
COPS3-204ENST00000462236 KCNQ5Q9NR82 932 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 SYNGAP1Q96PV0 1343 aa7.21□□□□□ -1.26
COPS3-204ENST00000462236 COL14A1Q05707 1796 aaKnown RBP7.2□□□□□ -1.26
COPS3-204ENST00000462236 NAIPQ13075 1403 aa7.2□□□□□ -1.26
COPS3-204ENST00000462236 TRIM37O94972 964 aa7.2□□□□□ -1.26
COPS3-204ENST00000462236 GSTP1P09211 210 aaKnown RBP7.2□□□□□ -1.26
COPS3-204ENST00000462236 ERCC5P28715 1186 aaPredicted RBP7.2□□□□□ -1.26
COPS3-204ENST00000462236 CDC25BP30305 580 aa7.2□□□□□ -1.26
COPS3-204ENST00000462236 LMNB2Q03252 620 aa7.2□□□□□ -1.26
COPS3-204ENST00000462236 LLGL2Q6P1M3 1020 aa7.2□□□□□ -1.26
COPS3-204ENST00000462236 KRT27Q7Z3Y8 459 aa7.2□□□□□ -1.26
COPS3-204ENST00000462236 PDZD3Q86UT5 571 aa7.2□□□□□ -1.26
COPS3-204ENST00000462236 RHOVQ96L33 236 aa7.2□□□□□ -1.26
COPS3-204ENST00000462236 MRPL18Q9H0U6 180 aaKnown RBP7.2□□□□□ -1.26
COPS3-204ENST00000462236 CACNA2D2Q9NY47 1150 aa7.2□□□□□ -1.26
COPS3-204ENST00000462236 CNTNAP5Q8WYK1 1306 aa7.2□□□□□ -1.26
COPS3-204ENST00000462236 CAMTA1Q9Y6Y1 1673 aa7.19□□□□□ -1.26
COPS3-204ENST00000462236 RGPD3A6NKT7 1758 aaPredicted RBP7.19□□□□□ -1.26
COPS3-204ENST00000462236 RGPD4Q7Z3J3 1758 aa7.19□□□□□ -1.26
COPS3-204ENST00000462236 MEGF11A6BM72 1044 aa7.19□□□□□ -1.26
COPS3-204ENST00000462236 RNF225M0QZC1 329 aaPredicted RBP7.19□□□□□ -1.26
COPS3-204ENST00000462236 PAGE1O75459 146 aa7.19□□□□□ -1.26
COPS3-204ENST00000462236 LMNB1P20700 586 aa7.19□□□□□ -1.26
COPS3-204ENST00000462236 GBP2P32456 591 aaPredicted RBP7.19□□□□□ -1.26
COPS3-204ENST00000462236 ZNF157P51786 506 aaPredicted RBP7.19□□□□□ -1.26
COPS3-204ENST00000462236 RAD51AP2Q09MP3 1159 aa7.19□□□□□ -1.26
COPS3-204ENST00000462236 NACC1Q96RE7 527 aa7.19□□□□□ -1.26
COPS3-204ENST00000462236 CARD10Q9BWT7 1032 aa7.19□□□□□ -1.26
COPS3-204ENST00000462236 KBTBD4Q9NVX7 518 aa7.19□□□□□ -1.26
COPS3-204ENST00000462236 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.19□□□□□ -1.26
COPS3-204ENST00000462236 LRPPRCP42704 1394 aaKnown RBP7.19□□□□□ -1.26
COPS3-204ENST00000462236 CCDC144AA2RUR9 1427 aa7.18□□□□□ -1.26
COPS3-204ENST00000462236 TNS3Q68CZ2 1445 aa7.18□□□□□ -1.26
COPS3-204ENST00000462236 ADGRB2O60241 1585 aa7.18□□□□□ -1.26
COPS3-204ENST00000462236 LOC105371045A0A1W2PR82 267 aa7.18□□□□□ -1.26
COPS3-204ENST00000462236 ZC3H6P61129 1189 aaKnown RBP7.18□□□□□ -1.26
COPS3-204ENST00000462236 FOXD4L6Q3SYB3 417 aaPredicted RBP7.18□□□□□ -1.26
COPS3-204ENST00000462236 HGSNATQ68CP4 663 aa7.18□□□□□ -1.26
COPS3-204ENST00000462236 FOXD4L3Q6VB84 417 aaPredicted RBP7.18□□□□□ -1.26
COPS3-204ENST00000462236 TRIM42Q8IWZ5 723 aa7.18□□□□□ -1.26
COPS3-204ENST00000462236 TMEM130Q8N3G9 435 aa7.18□□□□□ -1.26
COPS3-204ENST00000462236 SPATA32Q96LK8 384 aa7.18□□□□□ -1.26
COPS3-204ENST00000462236 STK17AQ9UEE5 414 aa7.18□□□□□ -1.26
COPS3-204ENST00000462236 CASZ1Q86V15 1759 aa7.18□□□□□ -1.26
COPS3-204ENST00000462236 LOC100289279A0A1B0GTE1 492 aa7.17□□□□□ -1.26
COPS3-204ENST00000462236 MAOBP27338 520 aa7.17□□□□□ -1.26
COPS3-204ENST00000462236 EIF4A3P38919 411 aaKnown RBP7.17□□□□□ -1.26
COPS3-204ENST00000462236 DUOXA2Q1HG44 320 aa7.17□□□□□ -1.26
COPS3-204ENST00000462236 LENG1Q96BZ8 264 aaPredicted RBP7.17□□□□□ -1.26
COPS3-204ENST00000462236 MIR1-1HGQ9H1L0 117 aa7.17□□□□□ -1.26
COPS3-204ENST00000462236 CCSER2Q9H7U1 834 aa7.17□□□□□ -1.26
COPS3-204ENST00000462236 COPRSQ9NQ92 184 aa7.17□□□□□ -1.26
COPS3-204ENST00000462236 SBNO1A3KN83 1393 aa7.17□□□□□ -1.26
COPS3-204ENST00000462236 NRXN1Q9ULB1 1477 aa7.17□□□□□ -1.26
COPS3-204ENST00000462236 CEP350Q5VT06 3117 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 C9orf172C9J069 976 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 ADAM11O75078 769 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 TFE3P19532 575 aaPredicted RBP7.16□□□□□ -1.26
COPS3-204ENST00000462236 YY1P25490 414 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 NLRP12P59046 1061 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 RACK1P63244 317 aaKnown RBP7.16□□□□□ -1.26
COPS3-204ENST00000462236 NRG1Q02297 640 aaPredicted RBP7.16□□□□□ -1.26
COPS3-204ENST00000462236 CAMK2GQ13555 558 aaPredicted RBP7.16□□□□□ -1.26
COPS3-204ENST00000462236 FAM50AQ14320 339 aaKnown RBP7.16□□□□□ -1.26
COPS3-204ENST00000462236 MAP3K11Q16584 847 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 ZNF394Q53GI3 561 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 EXOSC6Q5RKV6 272 aaKnown RBP7.16□□□□□ -1.26
COPS3-204ENST00000462236 C9orf131Q5VYM1 1079 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 STK35Q8TDR2 534 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 CAMKK2Q96RR4 588 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 USP26Q9BXU7 913 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 CBX8Q9HC52 389 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 SUPT16HQ9Y5B9 1047 aaKnown RBP7.16□□□□□ -1.26
COPS3-204ENST00000462236 RPGRIP1LQ68CZ1 1315 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 ABCC11Q96J66 1382 aa7.16□□□□□ -1.26
COPS3-204ENST00000462236 GREM1O60565 184 aa7.15□□□□□ -1.26
COPS3-204ENST00000462236 GNL2Q13823 731 aaKnown RBP7.15□□□□□ -1.26
COPS3-204ENST00000462236 R3HDM1Q15032 1099 aaKnown RBP7.15□□□□□ -1.26
COPS3-204ENST00000462236 KIAA0825Q8IV33 1275 aa7.15□□□□□ -1.26
COPS3-204ENST00000462236 SLC43A3Q8NBI5 491 aa7.15□□□□□ -1.26
COPS3-204ENST00000462236 NT5C1AQ9BXI3 368 aa7.15□□□□□ -1.26
COPS3-204ENST00000462236 RNF208Q9H0X6 261 aa7.15□□□□□ -1.26
COPS3-204ENST00000462236 SUGCTQ9HAC7 445 aa7.15□□□□□ -1.26
COPS3-204ENST00000462236 KCNK4Q9NYG8 393 aa7.15□□□□□ -1.26
COPS3-204ENST00000462236 FAM83GA6ND36 823 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 APBA3O96018 575 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 PF4P02776 101 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 SLFN14P0C7P3 912 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 KIF4BQ2VIQ3 1234 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 RASIP1Q5U651 963 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 MAP1SQ66K74 1059 aaPredicted RBP7.14□□□□□ -1.27
COPS3-204ENST00000462236 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.14□□□□□ -1.27
COPS3-204ENST00000462236 KRT28Q7Z3Y7 464 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 PARD3Q8TEW0 1356 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 KCNB2Q92953 911 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms