RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 COBLO75128 1261 aa20.96■□□□□ 0.95
HPS3-204ENST00000462030 GYPCP04921 128 aa20.96■□□□□ 0.95
HPS3-204ENST00000462030 FXR1P51114 621 aaKnown RBP eCLIP20.96■□□□□ 0.95
HPS3-204ENST00000462030 NKX1-1Q15270 411 aaPredicted RBP20.96■□□□□ 0.95
HPS3-204ENST00000462030 KIF4BQ2VIQ3 1234 aa20.96■□□□□ 0.95
HPS3-204ENST00000462030 SLC35F6Q8N357 371 aa20.96■□□□□ 0.95
HPS3-204ENST00000462030 CDC5LQ99459 802 aaKnown RBP20.96■□□□□ 0.95
HPS3-204ENST00000462030 FEZ2Q9UHY8 353 aaPredicted RBP20.96■□□□□ 0.95
HPS3-204ENST00000462030 VGLL3A8MV65 326 aa20.96■□□□□ 0.95
HPS3-204ENST00000462030 UQCRFS1P1P0C7P4 283 aa20.96■□□□□ 0.95
HPS3-204ENST00000462030 EARS2Q5JPH6 523 aaKnown RBP20.96■□□□□ 0.95
HPS3-204ENST00000462030 MSANTD4Q8NCY6 345 aa20.96■□□□□ 0.95
HPS3-204ENST00000462030 HNRNPLLQ8WVV9 542 aaKnown RBP20.96■□□□□ 0.95
HPS3-204ENST00000462030 PAGE5Q96GU1 130 aa20.96■□□□□ 0.95
HPS3-204ENST00000462030 RAB21Q9UL25 225 aa20.96■□□□□ 0.95
HPS3-204ENST00000462030 SNAP23O00161 211 aa20.95■□□□□ 0.94
HPS3-204ENST00000462030 GIGYF2Q6Y7W6 1299 aaKnown RBP20.95■□□□□ 0.94
HPS3-204ENST00000462030 AK7Q96M32 723 aa20.95■□□□□ 0.94
HPS3-204ENST00000462030 AATFQ9NY61 560 aaKnown RBP eCLIP20.95■□□□□ 0.94
HPS3-204ENST00000462030 WDR17Q8IZU2 1322 aa20.95■□□□□ 0.94
HPS3-204ENST00000462030 DPYDQ12882 1025 aa20.95■□□□□ 0.94
HPS3-204ENST00000462030 SH3RF1Q7Z6J0 888 aa20.95■□□□□ 0.94
HPS3-204ENST00000462030 LCORLQ8N3X6 602 aa20.95■□□□□ 0.94
HPS3-204ENST00000462030 SPATA5Q8NB90 893 aa20.95■□□□□ 0.94
HPS3-204ENST00000462030 STAG1Q8WVM7 1258 aa20.95■□□□□ 0.94
HPS3-204ENST00000462030 ABCB6Q9NP58 842 aa20.95■□□□□ 0.94
HPS3-204ENST00000462030 SHANK3Q9BYB0 1731 aa20.95■□□□□ 0.94
HPS3-204ENST00000462030 DOCK2Q92608 1830 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 WNT7AO00755 349 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 IRS4O14654 1257 aaPredicted RBP20.94■□□□□ 0.94
HPS3-204ENST00000462030 RHOXF2BP0C7M4 288 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 USP5P45974 858 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 TDO2P48775 406 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 WWC2Q6AWC2 1192 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 ZNF654Q8IZM8 581 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 FANCBQ8NB91 859 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 SYMPKQ92797 1274 aaKnown RBP20.94■□□□□ 0.94
HPS3-204ENST00000462030 RHOXF2Q9BQY4 288 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 PSD3Q9NYI0 1048 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 VPS18Q9P253 973 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 CTAGE9A4FU28 777 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 PPP1R3GB7ZBB8 358 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 N4BP1O75113 896 aaKnown RBP20.94■□□□□ 0.94
HPS3-204ENST00000462030 CCT6AP40227 531 aaKnown RBP20.94■□□□□ 0.94
HPS3-204ENST00000462030 RASGRF1Q13972 1273 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 SART3Q15020 963 aaKnown RBP20.94■□□□□ 0.94
HPS3-204ENST00000462030 STAMQ92783 540 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 VPS54Q9P1Q0 977 aa20.94■□□□□ 0.94
HPS3-204ENST00000462030 TRIM75PA6NK02 468 aa20.93■□□□□ 0.94
HPS3-204ENST00000462030 ERVK-24P63145 666 aa20.93■□□□□ 0.94
HPS3-204ENST00000462030 SLC20A2Q08357 652 aa20.93■□□□□ 0.94
HPS3-204ENST00000462030 MAP3K12Q12852 859 aa20.93■□□□□ 0.94
HPS3-204ENST00000462030 HDXQ7Z353 690 aa20.93■□□□□ 0.94
HPS3-204ENST00000462030 TOGARAM1Q9Y4F4 1720 aa20.93■□□□□ 0.94
HPS3-204ENST00000462030 ERICH2A1L162 156 aa20.93■□□□□ 0.94
HPS3-204ENST00000462030 CDC25AP30304 524 aa20.93■□□□□ 0.94
HPS3-204ENST00000462030 PUM3Q15397 648 aaKnown RBP20.93■□□□□ 0.94
HPS3-204ENST00000462030 L1RE1Q9UN81 338 aa20.93■□□□□ 0.94
HPS3-204ENST00000462030 CTNND2Q9UQB3 1225 aa20.93■□□□□ 0.94
HPS3-204ENST00000462030 SPATA31A3Q5VYP0 1347 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 hCG_1642624A0A1W2PR95 340 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 FGFR2P21802 821 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 VSNL1P62760 191 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 FILIP1LQ4L180 1135 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 CNGA4Q8IV77 575 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 LPIN2Q92539 896 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 CTAGE1Q96RT6 745 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 LCMT1Q9UIC8 334 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 SLC4A4Q9Y6R1 1079 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 CCDC196A0A1B0GTZ2 297 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 POTEB2H3BUK9 544 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 RNF225M0QZC1 329 aaPredicted RBP20.92■□□□□ 0.94
HPS3-204ENST00000462030 CT47A1Q5JQC4 288 aaPredicted RBP20.92■□□□□ 0.94
HPS3-204ENST00000462030 GOLGA5Q8TBA6 731 aa20.92■□□□□ 0.94
HPS3-204ENST00000462030 PRDM1O75626 825 aa20.91■□□□□ 0.94
HPS3-204ENST00000462030 FECHP22830 423 aa20.91■□□□□ 0.94
HPS3-204ENST00000462030 TTF2Q9UNY4 1162 aaKnown RBP20.91■□□□□ 0.94
HPS3-204ENST00000462030 IL2RBP14784 551 aa20.9■□□□□ 0.94
HPS3-204ENST00000462030 NOM1Q5C9Z4 860 aaKnown RBP20.9■□□□□ 0.94
HPS3-204ENST00000462030 NAPGQ99747 312 aaPredicted RBP20.9■□□□□ 0.94
HPS3-204ENST00000462030 PRDM11Q9NQV5 511 aa20.9■□□□□ 0.94
HPS3-204ENST00000462030 TMOD3Q9NYL9 352 aa20.9■□□□□ 0.94
HPS3-204ENST00000462030 TRMT112Q9UI30 125 aaKnown RBP20.9■□□□□ 0.94
HPS3-204ENST00000462030 ARAP2Q8WZ64 1704 aa20.9■□□□□ 0.94
HPS3-204ENST00000462030 ERLIN1O75477 346 aa20.9■□□□□ 0.94
HPS3-204ENST00000462030 ARHGAP25P42331 645 aa20.9■□□□□ 0.94
HPS3-204ENST00000462030 KRT31Q15323 416 aa20.9■□□□□ 0.94
HPS3-204ENST00000462030 MIGA1Q8NAN2 632 aa20.9■□□□□ 0.94
HPS3-204ENST00000462030 GSDMAQ96QA5 445 aa20.9■□□□□ 0.94
HPS3-204ENST00000462030 BCL9LQ86UU0 1499 aa20.9■□□□□ 0.94
HPS3-204ENST00000462030 BCORQ6W2J9 1755 aa20.9■□□□□ 0.94
HPS3-204ENST00000462030 SMIM22K7EJ46 135 aa20.89■□□□□ 0.94
HPS3-204ENST00000462030 SEMA3EO15041 775 aa20.89■□□□□ 0.94
HPS3-204ENST00000462030 MAPK8IP2Q13387 824 aaPredicted RBP20.89■□□□□ 0.94
HPS3-204ENST00000462030 PKN1Q16512 942 aa20.89■□□□□ 0.94
HPS3-204ENST00000462030 CCDC51Q96ER9 411 aa20.89■□□□□ 0.94
HPS3-204ENST00000462030 TSPYL1Q9H0U9 437 aa20.89■□□□□ 0.94
HPS3-204ENST00000462030 ABHD10Q9NUJ1 306 aa20.89■□□□□ 0.94
HPS3-204ENST00000462030 FAN1Q9Y2M0 1017 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms