RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 CYP2E1P05181 493 aaPredicted RBP6.77□□□□□ -1.32
CLK1-207ENST00000461981 DHX8Q14562 1220 aaKnown RBP6.77□□□□□ -1.32
CLK1-207ENST00000461981 TMCO3Q6UWJ1 677 aa6.77□□□□□ -1.32
CLK1-207ENST00000461981 CCDC186Q7Z3E2 898 aa6.77□□□□□ -1.32
CLK1-207ENST00000461981 SLAIN1Q8ND83 568 aa6.77□□□□□ -1.32
CLK1-207ENST00000461981 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.77□□□□□ -1.32
CLK1-207ENST00000461981 FAM89AQ96GI7 184 aa6.77□□□□□ -1.32
CLK1-207ENST00000461981 KDM4CQ9H3R0 1056 aa6.77□□□□□ -1.32
CLK1-207ENST00000461981 ZSCAN16Q9H4T2 348 aaPredicted RBP6.77□□□□□ -1.32
CLK1-207ENST00000461981 FOCADQ5VW36 1801 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 FRMD3A2A2Y4 597 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 SASH1O94885 1247 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 IGKV5-2P06315 115 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 PIP4K2AP48426 406 aaPredicted RBP6.77□□□□□ -1.33
CLK1-207ENST00000461981 IRX1P78414 480 aaPredicted RBP6.77□□□□□ -1.33
CLK1-207ENST00000461981 PTPN12Q05209 780 aaKnown RBP6.77□□□□□ -1.33
CLK1-207ENST00000461981 TBC1D8BQ0IIM8 1120 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 ZRSR1Q15695 479 aaKnown RBP6.77□□□□□ -1.33
CLK1-207ENST00000461981 N4BP2L2Q92802 583 aaPredicted RBP6.77□□□□□ -1.33
CLK1-207ENST00000461981 ZDHHC15Q96MV8 337 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 ZDHHC9Q9Y397 364 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 EME2A4GXA9 379 aaPredicted RBP6.77□□□□□ -1.33
CLK1-207ENST00000461981 SLU7O95391 586 aaKnown RBP6.77□□□□□ -1.33
CLK1-207ENST00000461981 IVLP07476 585 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 H2AFXP16104 143 aaPredicted RBP6.77□□□□□ -1.33
CLK1-207ENST00000461981 KCNA4P22459 653 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 CCNHP51946 323 aaPredicted RBP6.77□□□□□ -1.33
CLK1-207ENST00000461981 CORO7P57737 925 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 ARHGAP29Q52LW3 1261 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 FBXO33Q7Z6M2 555 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 TRIM74Q86UV6 250 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 TRIM73Q86UV7 250 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 TMTC2Q8N394 836 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 LRRN4CLQ8ND94 238 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 ZNF341Q9BYN7 854 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 MIS18AQ9NYP9 233 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 ADAM21Q9UKJ8 722 aa6.77□□□□□ -1.33
CLK1-207ENST00000461981 G3BP2Q9UN86 482 aaKnown RBP6.77□□□□□ -1.33
CLK1-207ENST00000461981 TBC1D12O60347 775 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 COQ9O75208 318 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 GADD45BO75293 160 aaPredicted RBP6.76□□□□□ -1.33
CLK1-207ENST00000461981 USP2O75604 605 aaPredicted RBP6.76□□□□□ -1.33
CLK1-207ENST00000461981 SLFN5Q08AF3 891 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 PDE3AQ14432 1141 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 MFSD4BQ5TF39 518 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 SLF2Q8IX21 1173 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 KAT2BQ92831 832 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 TATDN2Q93075 761 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 MS4A4AQ96JQ5 239 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 THUMPD2Q9BTF0 503 aaKnown RBP6.76□□□□□ -1.33
CLK1-207ENST00000461981 NRBP1Q9UHY1 535 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 MYPNQ86TC9 1320 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 USP27XA6NNY8 438 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 SMARCA5O60264 1052 aaPredicted RBP6.76□□□□□ -1.33
CLK1-207ENST00000461981 KINO60870 393 aaKnown RBP6.76□□□□□ -1.33
CLK1-207ENST00000461981 ENTPD3O75355 529 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 CIAO1O76071 339 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 ELF1P32519 619 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 MNX1P50219 401 aaPredicted RBP6.76□□□□□ -1.33
CLK1-207ENST00000461981 SNAPC2Q13487 334 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 SMC1AQ14683 1233 aaKnown RBP6.76□□□□□ -1.33
CLK1-207ENST00000461981 FBXW10Q5XX13 1052 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 TADA2BQ86TJ2 420 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 CCDC146Q8IYE0 955 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 FAM163AQ96GL9 167 aaPredicted RBP6.76□□□□□ -1.33
CLK1-207ENST00000461981 MPHOSPH8Q99549 860 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 DEFB129Q9H1M3 183 aa6.76□□□□□ -1.33
CLK1-207ENST00000461981 SKAP2O75563 359 aaPredicted RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 MYBL2P10244 700 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 RLBP1P12271 317 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 UBXN2AP68543 259 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 SNX1Q13596 522 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 DOK7Q18PE1 504 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 NFXL1Q6ZNB6 911 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 ERCC4Q92889 916 aaPredicted RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 TRIM47Q96LD4 638 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 TRIM6Q9C030 488 aaPredicted RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 GNL3LQ9NVN8 582 aaKnown RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 TMOD2Q9NZR1 351 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 ZNF70Q9UC06 446 aaPredicted RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 MAP3K2Q9Y2U5 619 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 CASTP20810 708 aaKnown RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 LIG3P49916 1009 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 FOXO4P98177 505 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 ADCY2Q08462 1091 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 PTPN14Q15678 1187 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 GORABQ5T7V8 394 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 RINLQ6ZS11 566 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 FASTKD5Q7L8L6 764 aaKnown RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 WDR66Q8TBY9 1149 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 TEPSINQ96N21 525 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 ZNF408Q9H9D4 720 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 TRMT1Q9NXH9 659 aaKnown RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 NR2E3Q9Y5X4 410 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 CSADQ9Y600 493 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 PTPRFP10586 1907 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 ATRNL1Q5VV63 1379 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 TMEM265A0A087WTH1 108 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 ANKRD33BA6NCL7 494 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms