RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 MINDY4BA8MYZ0 360 aa7.56□□□□□ -1.2
UBA3-204ENST00000461522 UPK3BL1B0FP48 263 aa7.56□□□□□ -1.2
UBA3-204ENST00000461522 UPK3BL2E5RIL1 263 aa7.56□□□□□ -1.2
UBA3-204ENST00000461522 YBX3P16989 372 aaKnown RBP eCLIP7.56□□□□□ -1.2
UBA3-204ENST00000461522 MPP2Q14168 576 aa7.56□□□□□ -1.2
UBA3-204ENST00000461522 SNAP47Q5SQN1 464 aa7.56□□□□□ -1.2
UBA3-204ENST00000461522 SLFN12Q8IYM2 578 aa7.56□□□□□ -1.2
UBA3-204ENST00000461522 GOLM1Q8NBJ4 401 aa7.56□□□□□ -1.2
UBA3-204ENST00000461522 FAM13CQ8NE31 585 aa7.56□□□□□ -1.2
UBA3-204ENST00000461522 Q96M66 194 aa7.56□□□□□ -1.2
UBA3-204ENST00000461522 KCNQ5Q9NR82 932 aa7.56□□□□□ -1.2
UBA3-204ENST00000461522 YARSP54577 528 aaKnown RBP7.55□□□□□ -1.2
UBA3-204ENST00000461522 ZNF326Q5BKZ1 582 aaKnown RBP7.55□□□□□ -1.2
UBA3-204ENST00000461522 FAM196AQ6ZSG2 479 aa7.55□□□□□ -1.2
UBA3-204ENST00000461522 REC114Q7Z4M0 266 aa7.55□□□□□ -1.2
UBA3-204ENST00000461522 UBE2FQ969M7 185 aa7.55□□□□□ -1.2
UBA3-204ENST00000461522 COPRSQ9NQ92 184 aa7.55□□□□□ -1.2
UBA3-204ENST00000461522 REV1Q9UBZ9 1251 aa7.55□□□□□ -1.2
UBA3-204ENST00000461522 HTR3BO95264 441 aa7.54□□□□□ -1.2
UBA3-204ENST00000461522 FBXO27Q8NI29 283 aa7.54□□□□□ -1.2
UBA3-204ENST00000461522 TMEM40Q8WWA1 233 aa7.54□□□□□ -1.2
UBA3-204ENST00000461522 C19orf73Q9NVV2 129 aa7.54□□□□□ -1.2
UBA3-204ENST00000461522 ZSWIM5Q9P217 1185 aa7.54□□□□□ -1.2
UBA3-204ENST00000461522 GRIN3BO60391 1043 aa7.53□□□□□ -1.2
UBA3-204ENST00000461522 FBXL19Q6PCT2 694 aa7.53□□□□□ -1.2
UBA3-204ENST00000461522 TMPRSS7Q7RTY8 843 aa7.53□□□□□ -1.2
UBA3-204ENST00000461522 LRRC3Q9BY71 257 aa7.53□□□□□ -1.2
UBA3-204ENST00000461522 ROBO2Q9HCK4 1378 aa7.52□□□□□ -1.21
UBA3-204ENST00000461522 CHURC1-FNTBB4DL54 471 aa7.52□□□□□ -1.21
UBA3-204ENST00000461522 GREM1O60565 184 aa7.52□□□□□ -1.21
UBA3-204ENST00000461522 DNAJA2O60884 412 aa7.52□□□□□ -1.21
UBA3-204ENST00000461522 ESR1P03372 595 aa7.52□□□□□ -1.21
UBA3-204ENST00000461522 ZSWIM9Q86XI8 627 aa7.52□□□□□ -1.21
UBA3-204ENST00000461522 DUSP15Q9H1R2 295 aaPredicted RBP7.52□□□□□ -1.21
UBA3-204ENST00000461522 SRFP11831 508 aa7.51□□□□□ -1.21
UBA3-204ENST00000461522 EIF4A3P38919 411 aaKnown RBP7.51□□□□□ -1.21
UBA3-204ENST00000461522 AFMP43652 599 aa7.51□□□□□ -1.21
UBA3-204ENST00000461522 GAB4Q2WGN9 574 aa7.51□□□□□ -1.21
UBA3-204ENST00000461522 DTWD2Q8NBA8 298 aa7.51□□□□□ -1.21
UBA3-204ENST00000461522 RNF141Q8WVD5 230 aa7.51□□□□□ -1.21
UBA3-204ENST00000461522 ALPK1Q96QP1 1244 aa7.51□□□□□ -1.21
UBA3-204ENST00000461522 GPR62Q9BZJ7 368 aa7.51□□□□□ -1.21
UBA3-204ENST00000461522 KLHL3Q9UH77 587 aa7.51□□□□□ -1.21
UBA3-204ENST00000461522 SUPT16HQ9Y5B9 1047 aaKnown RBP7.51□□□□□ -1.21
UBA3-204ENST00000461522 C8AP07357 584 aa7.5□□□□□ -1.21
UBA3-204ENST00000461522 GDNFP39905 211 aa7.5□□□□□ -1.21
UBA3-204ENST00000461522 KCNMB1Q16558 191 aa7.5□□□□□ -1.21
UBA3-204ENST00000461522 CWF19L2Q2TBE0 894 aaKnown RBP7.5□□□□□ -1.21
UBA3-204ENST00000461522 FYB2Q5VWT5 728 aa7.5□□□□□ -1.21
UBA3-204ENST00000461522 CCDC74BQ96LY2 380 aa7.5□□□□□ -1.21
UBA3-204ENST00000461522 ZNF503-AS2A6NEH8 195 aa7.49□□□□□ -1.21
UBA3-204ENST00000461522 WASH4PA8MWX3 477 aa7.49□□□□□ -1.21
UBA3-204ENST00000461522 TLR3O15455 904 aaKnown RBP7.49□□□□□ -1.21
UBA3-204ENST00000461522 HS2ST1Q7LGA3 356 aa7.49□□□□□ -1.21
UBA3-204ENST00000461522 BAHD1Q8TBE0 780 aaPredicted RBP7.49□□□□□ -1.21
UBA3-204ENST00000461522 ZNF296Q8WUU4 475 aaPredicted RBP7.49□□□□□ -1.21
UBA3-204ENST00000461522 CCDC120Q96HB5 630 aa7.49□□□□□ -1.21
UBA3-204ENST00000461522 BCL11AQ9H165 835 aa7.49□□□□□ -1.21
UBA3-204ENST00000461522 TRIT1Q9H3H1 467 aaKnown RBP7.49□□□□□ -1.21
UBA3-204ENST00000461522 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.49□□□□□ -1.21
UBA3-204ENST00000461522 GGT7Q9UJ14 662 aa7.49□□□□□ -1.21
UBA3-204ENST00000461522 KCNH3Q9ULD8 1083 aa7.49□□□□□ -1.21
UBA3-204ENST00000461522 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.48□□□□□ -1.21
UBA3-204ENST00000461522 ATE1O95260 518 aa7.48□□□□□ -1.21
UBA3-204ENST00000461522 ZNF16P17020 682 aaPredicted RBP7.48□□□□□ -1.21
UBA3-204ENST00000461522 TPP2P29144 1249 aaPredicted RBP7.48□□□□□ -1.21
UBA3-204ENST00000461522 LDLRAD1Q5T700 205 aa7.48□□□□□ -1.21
UBA3-204ENST00000461522 TMCO4Q5TGY1 634 aa7.48□□□□□ -1.21
UBA3-204ENST00000461522 KREMEN1Q96MU8 473 aa7.48□□□□□ -1.21
UBA3-204ENST00000461522 ASPNQ9BXN1 380 aa7.48□□□□□ -1.21
UBA3-204ENST00000461522 BRMS1Q9HCU9 246 aa7.48□□□□□ -1.21
UBA3-204ENST00000461522 SLAMF8Q9P0V8 285 aa7.48□□□□□ -1.21
UBA3-204ENST00000461522 ADAMTS1Q9UHI8 967 aa7.48□□□□□ -1.21
UBA3-204ENST00000461522 LRRN2O75325 713 aa7.47□□□□□ -1.21
UBA3-204ENST00000461522 CRKP46108 304 aa7.47□□□□□ -1.21
UBA3-204ENST00000461522 TNNI2P48788 182 aa7.47□□□□□ -1.21
UBA3-204ENST00000461522 ZNF648Q5T619 568 aaPredicted RBP7.47□□□□□ -1.21
UBA3-204ENST00000461522 TSPYL5Q86VY4 417 aaPredicted RBP7.47□□□□□ -1.21
UBA3-204ENST00000461522 CREG2Q8IUH2 290 aa7.47□□□□□ -1.21
UBA3-204ENST00000461522 KIRREL1Q96J84 757 aa7.47□□□□□ -1.21
UBA3-204ENST00000461522 KIF2CQ99661 725 aa7.47□□□□□ -1.21
UBA3-204ENST00000461522 KRTAP9-9Q9BYP9 154 aa7.47□□□□□ -1.21
UBA3-204ENST00000461522 KRTAP9-4Q9BYQ2 154 aa7.47□□□□□ -1.21
UBA3-204ENST00000461522 GPATCH2Q9NW75 528 aa7.47□□□□□ -1.21
UBA3-204ENST00000461522 FAM53CQ9NYF3 392 aa7.47□□□□□ -1.21
UBA3-204ENST00000461522 PCDHB14Q9Y5E9 798 aa7.47□□□□□ -1.21
UBA3-204ENST00000461522 DNAJC25-GNG10A0A024R161 153 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 ZBTB7CA1YPR0 619 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 SLC22A31A6NKX4 558 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 RGS13O14921 159 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 FARP2O94887 1054 aaPredicted RBP7.46□□□□□ -1.22
UBA3-204ENST00000461522 GLI1P08151 1106 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 MLECQ14165 292 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 RALGPS1Q5JS13 557 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 PHACTR4Q8IZ21 702 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 VWCEQ96DN2 955 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 EHMT1Q9H9B1 1298 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 GMIPQ9P107 970 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 TMEM59LQ9UK28 342 aa7.46□□□□□ -1.22
UBA3-204ENST00000461522 RBM47A0AV96 593 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms