RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 NMT2O60551 498 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 AOC2O75106 756 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 KDM4AO75164 1064 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 TSPY3P0CV98 308 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 TSPY8P0CW00 308 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 SPP2Q13103 211 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 PAXIP1Q6ZW49 1069 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-202ENST00000461433 ZNF280CQ8ND82 737 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 ACER1Q8TDN7 264 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 TOMM22Q9NS69 142 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 TSPY2A6NKD2 308 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 ECE1P42892 770 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 NOVP48745 357 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 GRM1Q13255 1194 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 MOGSQ13724 837 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 ADCK5Q3MIX3 580 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 RNF20Q5VTR2 975 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 CYB5R4Q7L1T6 521 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 ESR2Q92731 530 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 CEP95Q96GE4 821 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 TBC1D2Q9BYX2 928 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 KRT23Q9C075 422 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 CNNM2Q9H8M5 875 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 KANSL2Q9H9L4 492 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 TCP11L1Q9NUJ3 509 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 MTMR4Q9NYA4 1195 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 SNX14Q9Y5W7 946 aa13.33□□□□□ -0.28
SSBP1-202ENST00000461433 TRIM75PA6NK02 468 aa13.32□□□□□ -0.28
SSBP1-202ENST00000461433 CXCL11O14625 94 aa13.32□□□□□ -0.28
SSBP1-202ENST00000461433 EEF2P13639 858 aaKnown RBP13.32□□□□□ -0.28
SSBP1-202ENST00000461433 NT5C2P49902 561 aa13.32□□□□□ -0.28
SSBP1-202ENST00000461433 NOGQ13253 232 aa13.32□□□□□ -0.28
SSBP1-202ENST00000461433 MB21D2Q8IYB1 491 aaPredicted RBP13.32□□□□□ -0.28
SSBP1-202ENST00000461433 AS3MTQ9HBK9 375 aa13.32□□□□□ -0.28
SSBP1-202ENST00000461433 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
SSBP1-202ENST00000461433 LOC285556D6RIA3 1793 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 A0A0G2JLL6 359 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-202ENST00000461433 TESPA1A2RU30 521 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-202ENST00000461433 BACE1P56817 501 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 KIF23Q02241 960 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-202ENST00000461433 ICA1Q05084 483 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 DGKZQ13574 1117 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 RCSD1Q6JBY9 416 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 PRRT2Q7Z6L0 340 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-202ENST00000461433 NCOA7Q8NI08 942 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 NYAP2Q9P242 653 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 USP17L10C9JJH3 530 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 EIF5BO60841 1220 aaKnown RBP13.31□□□□□ -0.28
SSBP1-202ENST00000461433 ZKSCAN1P17029 563 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-202ENST00000461433 GTF2A2P52657 109 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 ANTXR2P58335 489 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 SNAPC2Q13487 334 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 MTMR2Q13614 643 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 SH3D19Q5HYK7 790 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 MKL1Q969V6 931 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 PTPN18Q99952 460 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 ZKSCAN3Q9BRR0 538 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 BACH2Q9BYV9 841 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 KIAA1683Q9H0B3 1180 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 TMX2Q9Y320 296 aa13.31□□□□□ -0.28
SSBP1-202ENST00000461433 MAP2K2P36507 400 aa13.3□□□□□ -0.28
SSBP1-202ENST00000461433 TM4SF4P48230 202 aa13.3□□□□□ -0.28
SSBP1-202ENST00000461433 TRDNQ13061 729 aa13.3□□□□□ -0.28
SSBP1-202ENST00000461433 KIAA1755Q5JYT7 1200 aa13.3□□□□□ -0.28
SSBP1-202ENST00000461433 CHST3Q7LGC8 479 aa13.3□□□□□ -0.28
SSBP1-202ENST00000461433 BRI3BPQ8WY22 251 aa13.3□□□□□ -0.28
SSBP1-202ENST00000461433 IL17RAQ96F46 866 aa13.3□□□□□ -0.28
SSBP1-202ENST00000461433 EMILIN3Q9NT22 766 aa13.3□□□□□ -0.28
SSBP1-202ENST00000461433 CLIP2Q9UDT6 1046 aa13.3□□□□□ -0.28
SSBP1-202ENST00000461433 MANSC4A6NHS7 340 aaPredicted RBP13.29□□□□□ -0.28
SSBP1-202ENST00000461433 C19orf81C9J6K1 198 aa13.29□□□□□ -0.28
SSBP1-202ENST00000461433 TTLL1O95922 423 aa13.29□□□□□ -0.28
SSBP1-202ENST00000461433 CETPP11597 493 aa13.29□□□□□ -0.28
SSBP1-202ENST00000461433 HMGCS2P54868 508 aa13.29□□□□□ -0.28
SSBP1-202ENST00000461433 SEC23AQ15436 765 aa13.29□□□□□ -0.28
SSBP1-202ENST00000461433 GPAT2Q6NUI2 795 aa13.29□□□□□ -0.28
SSBP1-202ENST00000461433 RALYLQ86SE5 291 aaKnown RBP13.29□□□□□ -0.28
SSBP1-202ENST00000461433 ANKS1AQ92625 1134 aa13.29□□□□□ -0.28
SSBP1-202ENST00000461433 NEK1Q96PY6 1258 aa13.29□□□□□ -0.28
SSBP1-202ENST00000461433 ZSCAN10Q96SZ4 725 aaPredicted RBP13.29□□□□□ -0.28
SSBP1-202ENST00000461433 ARHGEF10LQ9HCE6 1279 aa13.29□□□□□ -0.28
SSBP1-202ENST00000461433 CCL15-CCL14A0A0B4J2E2 113 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 MCCP23508 829 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 EXOSC10Q01780 885 aaKnown RBP13.28□□□□□ -0.28
SSBP1-202ENST00000461433 ATP2B2Q01814 1243 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 KRT32Q14532 448 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 CCL15Q16663 113 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 DGKHQ86XP1 1220 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 ENAHQ8N8S7 591 aaPredicted RBP13.28□□□□□ -0.28
SSBP1-202ENST00000461433 IGDCC4Q8TDY8 1250 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 C12orf42Q96LP6 360 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 TTC14Q96N46 770 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 STX8Q9UNK0 236 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 IGF2BP3O00425 579 aaKnown RBP eCLIP13.28□□□□□ -0.28
SSBP1-202ENST00000461433 CPA1P15085 419 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 MCM5P33992 734 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 INHBEP58166 350 aa13.28□□□□□ -0.28
SSBP1-202ENST00000461433 ZYXQ15942 572 aaKnown RBP13.28□□□□□ -0.28
SSBP1-202ENST00000461433 USP17L2Q6R6M4 530 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms