RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 hCG_1642624A0A1W2PR95 340 aa23.29■■□□□ 1.32
CCM2-203ENST00000461377 SYKP43405 635 aa23.29■■□□□ 1.32
CCM2-203ENST00000461377 PLCD1P51178 756 aa23.29■■□□□ 1.32
CCM2-203ENST00000461377 RHBDL3P58872 404 aa23.29■■□□□ 1.32
CCM2-203ENST00000461377 TEX11Q8IYF3 940 aa23.29■■□□□ 1.32
CCM2-203ENST00000461377 KRI1Q8N9T8 703 aaKnown RBP23.29■■□□□ 1.32
CCM2-203ENST00000461377 ERCC4Q92889 916 aaPredicted RBP23.29■■□□□ 1.32
CCM2-203ENST00000461377 CLIC6Q96NY7 704 aa23.29■■□□□ 1.32
CCM2-203ENST00000461377 KAT14Q9H8E8 782 aa23.29■■□□□ 1.32
CCM2-203ENST00000461377 MKNK2Q9HBH9 465 aa23.29■■□□□ 1.32
CCM2-203ENST00000461377 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.28■■□□□ 1.32
CCM2-203ENST00000461377 KRT2P35908 639 aa23.28■■□□□ 1.32
CCM2-203ENST00000461377 SAP30BPQ9UHR5 308 aaKnown RBP23.28■■□□□ 1.32
CCM2-203ENST00000461377 KIF5BP33176 963 aa23.27■■□□□ 1.32
CCM2-203ENST00000461377 PDE6BP35913 854 aa23.27■■□□□ 1.32
CCM2-203ENST00000461377 CDK5RAP2Q96SN8 1893 aa23.27■■□□□ 1.32
CCM2-203ENST00000461377 MMP10P09238 476 aa23.27■■□□□ 1.32
CCM2-203ENST00000461377 CEP57L1Q8IYX8 460 aa23.27■■□□□ 1.32
CCM2-203ENST00000461377 CABP5Q9NP86 173 aa23.27■■□□□ 1.32
CCM2-203ENST00000461377 FBXO2Q9UK22 296 aaPredicted RBP23.27■■□□□ 1.32
CCM2-203ENST00000461377 PCDHB6Q9Y5E3 794 aa23.27■■□□□ 1.32
CCM2-203ENST00000461377 MORC2Q9Y6X9 1032 aaPredicted RBP23.27■■□□□ 1.32
CCM2-203ENST00000461377 FLT1P17948 1338 aa23.26■■□□□ 1.31
CCM2-203ENST00000461377 A0A087WWV3 80 aa23.26■■□□□ 1.31
CCM2-203ENST00000461377 RASA1P20936 1047 aa23.26■■□□□ 1.31
CCM2-203ENST00000461377 PTPREP23469 700 aa23.26■■□□□ 1.31
CCM2-203ENST00000461377 ALDH1B1P30837 517 aa23.26■■□□□ 1.31
CCM2-203ENST00000461377 GTF2IP78347 998 aa23.26■■□□□ 1.31
CCM2-203ENST00000461377 PLA2G4DQ86XP0 818 aa23.26■■□□□ 1.31
CCM2-203ENST00000461377 ZNF444Q8N0Y2 327 aaPredicted RBP23.26■■□□□ 1.31
CCM2-203ENST00000461377 SLC44A5Q8NCS7 719 aa23.26■■□□□ 1.31
CCM2-203ENST00000461377 PARP3Q9Y6F1 533 aa23.26■■□□□ 1.31
CCM2-203ENST00000461377 RIMBP2O15034 1052 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 TSPY3P0CV98 308 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 TSPY8P0CW00 308 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 NPY5RQ15761 445 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 C16orf86Q6ZW13 317 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 MPNDQ8N594 471 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 PNMA1Q8ND90 353 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 ZNF287Q9HBT7 754 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 CEP131Q9UPN4 1083 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 SUGT1Q9Y2Z0 365 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 COL11A2P13942 1736 aaPredicted RBP23.25■■□□□ 1.31
CCM2-203ENST00000461377 GOLGA6L19H0YKK7 550 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 ZNF75DP51815 510 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 DHX40Q8IX18 779 aaKnown RBP23.25■■□□□ 1.31
CCM2-203ENST00000461377 TNFRSF25Q93038 417 aa23.25■■□□□ 1.31
CCM2-203ENST00000461377 SNED1Q8TER0 1413 aa23.24■■□□□ 1.31
CCM2-203ENST00000461377 USP17L3A6NCW0 530 aa23.24■■□□□ 1.31
CCM2-203ENST00000461377 USP17L4A6NCW7 530 aa23.24■■□□□ 1.31
CCM2-203ENST00000461377 SCG2P13521 617 aa23.24■■□□□ 1.31
CCM2-203ENST00000461377 GRM4Q14833 912 aa23.24■■□□□ 1.31
CCM2-203ENST00000461377 PFKFB3Q16875 520 aaPredicted RBP23.24■■□□□ 1.31
CCM2-203ENST00000461377 SARM1Q6SZW1 724 aa23.24■■□□□ 1.31
CCM2-203ENST00000461377 USP17L1Q7RTZ2 530 aa23.24■■□□□ 1.31
CCM2-203ENST00000461377 MASTLQ96GX5 879 aa23.24■■□□□ 1.31
CCM2-203ENST00000461377 NAT10Q9H0A0 1025 aaKnown RBP23.24■■□□□ 1.31
CCM2-203ENST00000461377 BRMS1Q9HCU9 246 aa23.24■■□□□ 1.31
CCM2-203ENST00000461377 DAGLAQ9Y4D2 1042 aa23.24■■□□□ 1.31
CCM2-203ENST00000461377 OLFM4Q6UX06 510 aa23.23■■□□□ 1.31
CCM2-203ENST00000461377 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.23■■□□□ 1.31
CCM2-203ENST00000461377 ZNF579Q8NAF0 562 aaKnown RBP23.23■■□□□ 1.31
CCM2-203ENST00000461377 ZC3H12CQ9C0D7 883 aaKnown RBP23.23■■□□□ 1.31
CCM2-203ENST00000461377 FAM205CA6NFA0 338 aa23.23■■□□□ 1.31
CCM2-203ENST00000461377 TPM3P06753 285 aa23.23■■□□□ 1.31
CCM2-203ENST00000461377 CDK8P49336 464 aa23.23■■□□□ 1.31
CCM2-203ENST00000461377 NLRP12P59046 1061 aa23.23■■□□□ 1.31
CCM2-203ENST00000461377 EARS2Q5JPH6 523 aaKnown RBP23.23■■□□□ 1.31
CCM2-203ENST00000461377 BPIFA3Q9BQP9 254 aa23.23■■□□□ 1.31
CCM2-203ENST00000461377 TRIM5Q9C035 493 aa23.23■■□□□ 1.31
CCM2-203ENST00000461377 KCNH3Q9ULD8 1083 aa23.23■■□□□ 1.31
CCM2-203ENST00000461377 SRPRBQ9Y5M8 271 aaKnown RBP23.23■■□□□ 1.31
CCM2-203ENST00000461377 GOLGA6L6A8MZA4 724 aa23.22■■□□□ 1.31
CCM2-203ENST00000461377 DPP8Q6V1X1 898 aaPredicted RBP23.22■■□□□ 1.31
CCM2-203ENST00000461377 ZNF830Q96NB3 372 aaPredicted RBP23.22■■□□□ 1.31
CCM2-203ENST00000461377 TUBE1Q9UJT0 475 aa23.22■■□□□ 1.31
CCM2-203ENST00000461377 QSER1Q2KHR3 1735 aa23.22■■□□□ 1.31
CCM2-203ENST00000461377 TRIM75PA6NK02 468 aa23.21■■□□□ 1.31
CCM2-203ENST00000461377 BECN2A8MW95 431 aa23.21■■□□□ 1.31
CCM2-203ENST00000461377 GRIN1Q05586 938 aa23.21■■□□□ 1.31
CCM2-203ENST00000461377 ZRSR1Q15695 479 aaKnown RBP23.21■■□□□ 1.31
CCM2-203ENST00000461377 DPCR1Q3MIW9 517 aa23.21■■□□□ 1.31
CCM2-203ENST00000461377 ELOA2Q8IYF1 753 aaPredicted RBP23.21■■□□□ 1.31
CCM2-203ENST00000461377 TTC12Q9H892 705 aaPredicted RBP23.21■■□□□ 1.31
CCM2-203ENST00000461377 TNS1Q9HBL0 1735 aaKnown RBP23.21■■□□□ 1.31
CCM2-203ENST00000461377 GNAQP50148 359 aa23.21■■□□□ 1.31
CCM2-203ENST00000461377 KRBA2Q6ZNG9 492 aa23.21■■□□□ 1.31
CCM2-203ENST00000461377 CERS5Q8N5B7 392 aa23.21■■□□□ 1.31
CCM2-203ENST00000461377 SPC24Q8NBT2 197 aa23.21■■□□□ 1.31
CCM2-203ENST00000461377 MAD2L2Q9UI95 211 aa23.21■■□□□ 1.31
CCM2-203ENST00000461377 ATP2B1P20020 1258 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 RXRBP28702 533 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 NEDD1Q8NHV4 660 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 EYA3Q99504 573 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 TMEM47Q9BQJ4 181 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 FAM13BQ9NYF5 915 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 FOCADQ5VW36 1801 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 OFD1O75665 1012 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 CDC25BP30305 580 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 KIAA2012Q0VF49 1180 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms