RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 EMILIN3Q9NT22 766 aa18.45■□□□□ 0.54
VARS-219ENST00000461328 STAP2Q9UGK3 403 aa18.45■□□□□ 0.54
VARS-219ENST00000461328 TAOK2Q9UL54 1235 aa18.45■□□□□ 0.54
VARS-219ENST00000461328 GABRQQ9UN88 632 aa18.45■□□□□ 0.54
VARS-219ENST00000461328 USP17L12C9JPN9 530 aa18.44■□□□□ 0.54
VARS-219ENST00000461328 USP17L21D6R901 530 aa18.44■□□□□ 0.54
VARS-219ENST00000461328 GPAA1O43292 621 aa18.44■□□□□ 0.54
VARS-219ENST00000461328 USP14P54578 494 aa18.44■□□□□ 0.54
VARS-219ENST00000461328 NUCB1Q02818 461 aa18.44■□□□□ 0.54
VARS-219ENST00000461328 SEPT2Q15019 361 aa18.44■□□□□ 0.54
VARS-219ENST00000461328 ACER1Q8TDN7 264 aa18.44■□□□□ 0.54
VARS-219ENST00000461328 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
VARS-219ENST00000461328 DYNLL2Q96FJ2 89 aa18.44■□□□□ 0.54
VARS-219ENST00000461328 C12orf42Q96LP6 360 aa18.44■□□□□ 0.54
VARS-219ENST00000461328 STRBPQ96SI9 672 aaKnown RBP18.44■□□□□ 0.54
VARS-219ENST00000461328 P2RX7Q99572 595 aaKnown RBP18.44■□□□□ 0.54
VARS-219ENST00000461328 KIAA1683Q9H0B3 1180 aa18.44■□□□□ 0.54
VARS-219ENST00000461328 BIN2Q9UBW5 565 aaPredicted RBP18.44■□□□□ 0.54
VARS-219ENST00000461328 RBBP6Q7Z6E9 1792 aaKnown RBP18.43■□□□□ 0.54
VARS-219ENST00000461328 CYP2D7A0A087X1C5 515 aa18.43■□□□□ 0.54
VARS-219ENST00000461328 M0R2C6 588 aa18.43■□□□□ 0.54
VARS-219ENST00000461328 APPP05067 770 aa18.43■□□□□ 0.54
VARS-219ENST00000461328 GNAT2P19087 354 aa18.43■□□□□ 0.54
VARS-219ENST00000461328 EN2P19622 333 aaPredicted RBP18.43■□□□□ 0.54
VARS-219ENST00000461328 GUCY1A2P33402 732 aa18.43■□□□□ 0.54
VARS-219ENST00000461328 FLT3LGP49771 235 aa18.43■□□□□ 0.54
VARS-219ENST00000461328 HERVK_113P62684 666 aa18.43■□□□□ 0.54
VARS-219ENST00000461328 C12orf60Q5U649 245 aa18.43■□□□□ 0.54
VARS-219ENST00000461328 SLAIN1Q8ND83 568 aa18.43■□□□□ 0.54
VARS-219ENST00000461328 ARPP21Q9UBL0 812 aaPredicted RBP18.43■□□□□ 0.54
VARS-219ENST00000461328 TNRC18O15417 2968 aaPredicted RBP18.43■□□□□ 0.54
VARS-219ENST00000461328 TRIM6-TRIM34B2RNG4 842 aa18.42■□□□□ 0.54
VARS-219ENST00000461328 TDO2P48775 406 aa18.42■□□□□ 0.54
VARS-219ENST00000461328 TMEM179Q6ZVK1 233 aa18.42■□□□□ 0.54
VARS-219ENST00000461328 MORF4L1Q9UBU8 362 aa18.42■□□□□ 0.54
VARS-219ENST00000461328 BAZ2AQ9UIF9 1905 aaKnown RBP18.42■□□□□ 0.54
VARS-219ENST00000461328 CENPFP49454 3210 aa18.42■□□□□ 0.54
VARS-219ENST00000461328 USP17L15C9J2P7 530 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 USP17L13C9JLJ4 530 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 USP17L11C9JVI0 530 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 USP17L18D6R9N7 530 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 USP17L22D6RA61 530 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 USP17L17D6RBQ6 530 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 USP17L19D6RCP7 530 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 USP17L20D6RJB6 530 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 UBXN2AP68543 259 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 USP17L24Q0WX57 530 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 IRF5Q13568 498 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 CTR9Q6PD62 1173 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 GPRC5AQ8NFJ5 357 aa18.41■□□□□ 0.54
VARS-219ENST00000461328 GTF3C2Q8WUA4 911 aaPredicted RBP18.41■□□□□ 0.54
VARS-219ENST00000461328 ADCY3O60266 1144 aa18.4■□□□□ 0.54
VARS-219ENST00000461328 AKR1B1P15121 316 aa18.4■□□□□ 0.54
VARS-219ENST00000461328 VCAM1P19320 739 aa18.4■□□□□ 0.54
VARS-219ENST00000461328 CDK8P49336 464 aa18.4■□□□□ 0.54
VARS-219ENST00000461328 MTFR1Q15390 333 aa18.4■□□□□ 0.54
VARS-219ENST00000461328 ZMYM1Q5SVZ6 1142 aa18.4■□□□□ 0.54
VARS-219ENST00000461328 C16orf86Q6ZW13 317 aa18.4■□□□□ 0.54
VARS-219ENST00000461328 RILPL2Q969X0 211 aa18.4■□□□□ 0.54
VARS-219ENST00000461328 CCDC17Q96LX7 622 aa18.4■□□□□ 0.54
VARS-219ENST00000461328 SEC62Q99442 399 aaKnown RBP18.4■□□□□ 0.54
VARS-219ENST00000461328 PAGR1Q9BTK6 254 aa18.4■□□□□ 0.54
VARS-219ENST00000461328 NACAP1Q9BZK3 213 aa18.4■□□□□ 0.54
VARS-219ENST00000461328 GSG1L2A8MUP6 293 aa18.39■□□□□ 0.53
VARS-219ENST00000461328 MINDY4BA8MYZ0 360 aa18.39■□□□□ 0.53
VARS-219ENST00000461328 SMIM22K7EJ46 135 aa18.39■□□□□ 0.53
VARS-219ENST00000461328 ELNP15502 786 aa18.39■□□□□ 0.53
VARS-219ENST00000461328 GIMAP6Q6P9H5 292 aa18.39■□□□□ 0.53
VARS-219ENST00000461328 CCAR1Q8IX12 1150 aaKnown RBP18.39■□□□□ 0.53
VARS-219ENST00000461328 RPAP3Q9H6T3 665 aaPredicted RBP18.39■□□□□ 0.53
VARS-219ENST00000461328 TXNRD2Q9NNW7 524 aa18.39■□□□□ 0.53
VARS-219ENST00000461328 RBPJLQ9UBG7 517 aa18.39■□□□□ 0.53
VARS-219ENST00000461328 A0A1W2PRG0 241 aa18.38■□□□□ 0.53
VARS-219ENST00000461328 PEX10O60683 326 aa18.38■□□□□ 0.53
VARS-219ENST00000461328 CCL5P13501 91 aa18.38■□□□□ 0.53
VARS-219ENST00000461328 ICA1Q05084 483 aa18.38■□□□□ 0.53
VARS-219ENST00000461328 CATSPERGQ6ZRH7 1159 aa18.38■□□□□ 0.53
VARS-219ENST00000461328 PLEKHM2Q8IWE5 1019 aa18.38■□□□□ 0.53
VARS-219ENST00000461328 STK11IPQ8N1F8 1099 aa18.38■□□□□ 0.53
VARS-219ENST00000461328 PXYLP1Q8TE99 480 aa18.38■□□□□ 0.53
VARS-219ENST00000461328 ARHGEF10LQ9HCE6 1279 aa18.38■□□□□ 0.53
VARS-219ENST00000461328 EPB41L4AQ9HCS5 686 aaPredicted RBP18.38■□□□□ 0.53
VARS-219ENST00000461328 MYH8P13535 1937 aa18.38■□□□□ 0.53
VARS-219ENST00000461328 KIAA0100Q14667 2235 aaKnown RBP18.38■□□□□ 0.53
VARS-219ENST00000461328 INHAP05111 366 aa18.37■□□□□ 0.53
VARS-219ENST00000461328 ERVK-9P63128 1117 aa18.37■□□□□ 0.53
VARS-219ENST00000461328 ERVK-24P63145 666 aa18.37■□□□□ 0.53
VARS-219ENST00000461328 SBK1Q52WX2 424 aa18.37■□□□□ 0.53
VARS-219ENST00000461328 CCDC129Q6ZRS4 1044 aa18.37■□□□□ 0.53
VARS-219ENST00000461328 CLEC10AQ8IUN9 316 aa18.37■□□□□ 0.53
VARS-219ENST00000461328 RNF208Q9H0X6 261 aa18.37■□□□□ 0.53
VARS-219ENST00000461328 NAPBQ9H115 298 aa18.37■□□□□ 0.53
VARS-219ENST00000461328 SH2D4AQ9H788 454 aa18.37■□□□□ 0.53
VARS-219ENST00000461328 PATL2C9JE40 543 aaKnown RBP18.36■□□□□ 0.53
VARS-219ENST00000461328 MAPK4P31152 587 aa18.36■□□□□ 0.53
VARS-219ENST00000461328 MKNK2Q9HBH9 465 aa18.36■□□□□ 0.53
VARS-219ENST00000461328 CWC22Q9HCG8 908 aaKnown RBP18.36■□□□□ 0.53
VARS-219ENST00000461328 RABGAP1Q9Y3P9 1069 aa18.36■□□□□ 0.53
VARS-219ENST00000461328 ATP2B2Q01814 1243 aa18.35■□□□□ 0.53
VARS-219ENST00000461328 Q3C1V9 767 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms