RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 CCDC17Q96LX7 622 aa24.48■■□□□ 1.51
SCAF8-204ENST00000461219 OSBPL3Q9H4L5 887 aa24.48■■□□□ 1.51
SCAF8-204ENST00000461219 HELLSQ9NRZ9 838 aa24.48■■□□□ 1.51
SCAF8-204ENST00000461219 SBK1Q52WX2 424 aa24.47■■□□□ 1.51
SCAF8-204ENST00000461219 CCDC129Q6ZRS4 1044 aa24.47■■□□□ 1.51
SCAF8-204ENST00000461219 IFNL3Q8IZI9 196 aa24.47■■□□□ 1.51
SCAF8-204ENST00000461219 ARHGEF10LQ9HCE6 1279 aa24.47■■□□□ 1.51
SCAF8-204ENST00000461219 FMNL1O95466 1100 aaPredicted RBP24.46■■□□□ 1.51
SCAF8-204ENST00000461219 TICAM2Q86XR7 235 aa24.46■■□□□ 1.51
SCAF8-204ENST00000461219 DIAPH3Q9NSV4 1193 aa24.46■■□□□ 1.51
SCAF8-204ENST00000461219 AKR1B1P15121 316 aa24.45■■□□□ 1.5
SCAF8-204ENST00000461219 HOXD10P28358 340 aa24.45■■□□□ 1.5
SCAF8-204ENST00000461219 PSMC4P43686 418 aa24.45■■□□□ 1.5
SCAF8-204ENST00000461219 ATP2B2Q01814 1243 aa24.45■■□□□ 1.5
SCAF8-204ENST00000461219 MCMDC2Q4G0Z9 681 aa24.45■■□□□ 1.5
SCAF8-204ENST00000461219 ASCC2Q9H1I8 757 aaPredicted RBP24.45■■□□□ 1.5
SCAF8-204ENST00000461219 SH2D4AQ9H788 454 aa24.45■■□□□ 1.5
SCAF8-204ENST00000461219 HPS5Q9UPZ3 1129 aa24.45■■□□□ 1.5
SCAF8-204ENST00000461219 ADGRA2Q96PE1 1338 aa24.44■■□□□ 1.5
SCAF8-204ENST00000461219 MYH4Q9Y623 1939 aa24.44■■□□□ 1.5
SCAF8-204ENST00000461219 GNRH1P01148 92 aa24.44■■□□□ 1.5
SCAF8-204ENST00000461219 NEFLP07196 543 aa24.44■■□□□ 1.5
SCAF8-204ENST00000461219 GCLCP48506 637 aaPredicted RBP24.44■■□□□ 1.5
SCAF8-204ENST00000461219 MFAP1P55081 439 aaKnown RBP24.44■■□□□ 1.5
SCAF8-204ENST00000461219 ICA1Q05084 483 aa24.44■■□□□ 1.5
SCAF8-204ENST00000461219 ANKRD13CQ8N6S4 541 aa24.44■■□□□ 1.5
SCAF8-204ENST00000461219 EPB41L4AQ9HCS5 686 aaPredicted RBP24.44■■□□□ 1.5
SCAF8-204ENST00000461219 PTPN22Q9Y2R2 807 aa24.44■■□□□ 1.5
SCAF8-204ENST00000461219 HIP1O00291 1037 aa24.43■■□□□ 1.5
SCAF8-204ENST00000461219 FCGRTP55899 365 aa24.43■■□□□ 1.5
SCAF8-204ENST00000461219 PDE4BQ07343 736 aa24.43■■□□□ 1.5
SCAF8-204ENST00000461219 NMIQ13287 307 aaPredicted RBP24.43■■□□□ 1.5
SCAF8-204ENST00000461219 ZNF444Q8N0Y2 327 aaPredicted RBP24.43■■□□□ 1.5
SCAF8-204ENST00000461219 ACER1Q8TDN7 264 aa24.43■■□□□ 1.5
SCAF8-204ENST00000461219 FAM227BQ96M60 508 aa24.43■■□□□ 1.5
SCAF8-204ENST00000461219 ARHGAP39Q9C0H5 1083 aa24.43■■□□□ 1.5
SCAF8-204ENST00000461219 KIAA1683Q9H0B3 1180 aa24.43■■□□□ 1.5
SCAF8-204ENST00000461219 SMIM22K7EJ46 135 aa24.42■■□□□ 1.5
SCAF8-204ENST00000461219 RAD21O60216 631 aa24.42■■□□□ 1.5
SCAF8-204ENST00000461219 BCRP11274 1271 aa24.42■■□□□ 1.5
SCAF8-204ENST00000461219 SDSP20132 328 aa24.42■■□□□ 1.5
SCAF8-204ENST00000461219 EMILIN3Q9NT22 766 aa24.42■■□□□ 1.5
SCAF8-204ENST00000461219 A0A0D9SFI3 127 aa24.41■■□□□ 1.5
SCAF8-204ENST00000461219 HOXA7P31268 230 aaPredicted RBP24.41■■□□□ 1.5
SCAF8-204ENST00000461219 GUCY1A2P33402 732 aa24.41■■□□□ 1.5
SCAF8-204ENST00000461219 ROBO3Q96MS0 1386 aa24.41■■□□□ 1.5
SCAF8-204ENST00000461219 USP17L15C9J2P7 530 aa24.4■■□□□ 1.5
SCAF8-204ENST00000461219 USP17L13C9JLJ4 530 aa24.4■■□□□ 1.5
SCAF8-204ENST00000461219 USP17L11C9JVI0 530 aa24.4■■□□□ 1.5
SCAF8-204ENST00000461219 USP17L18D6R9N7 530 aa24.4■■□□□ 1.5
SCAF8-204ENST00000461219 USP17L22D6RA61 530 aa24.4■■□□□ 1.5
SCAF8-204ENST00000461219 USP17L17D6RBQ6 530 aa24.4■■□□□ 1.5
SCAF8-204ENST00000461219 USP17L19D6RCP7 530 aa24.4■■□□□ 1.5
SCAF8-204ENST00000461219 USP17L20D6RJB6 530 aa24.4■■□□□ 1.5
SCAF8-204ENST00000461219 PPARAQ07869 468 aa24.4■■□□□ 1.5
SCAF8-204ENST00000461219 USP17L24Q0WX57 530 aa24.4■■□□□ 1.5
SCAF8-204ENST00000461219 CCAR1Q8IX12 1150 aaKnown RBP24.4■■□□□ 1.5
SCAF8-204ENST00000461219 KANSL2Q9H9L4 492 aa24.4■■□□□ 1.5
SCAF8-204ENST00000461219 PRMT2P55345 433 aa24.39■■□□□ 1.49
SCAF8-204ENST00000461219 FAM110CQ1W6H9 321 aa24.39■■□□□ 1.49
SCAF8-204ENST00000461219 CLEC10AQ8IUN9 316 aa24.39■■□□□ 1.49
SCAF8-204ENST00000461219 GTF3C2Q8WUA4 911 aaPredicted RBP24.39■■□□□ 1.49
SCAF8-204ENST00000461219 C12orf42Q96LP6 360 aa24.39■■□□□ 1.49
SCAF8-204ENST00000461219 CCDC171Q6TFL3 1326 aa24.38■■□□□ 1.49
SCAF8-204ENST00000461219 TNPO2O14787 897 aaKnown RBP24.38■■□□□ 1.49
SCAF8-204ENST00000461219 PRDM1O75626 825 aa24.38■■□□□ 1.49
SCAF8-204ENST00000461219 VCAM1P19320 739 aa24.38■■□□□ 1.49
SCAF8-204ENST00000461219 PDE4AP27815 886 aa24.38■■□□□ 1.49
SCAF8-204ENST00000461219 HERVK_113P62684 666 aa24.38■■□□□ 1.49
SCAF8-204ENST00000461219 SLC9C1Q4G0N8 1177 aa24.38■■□□□ 1.49
SCAF8-204ENST00000461219 TTC22Q5TAA0 569 aa24.38■■□□□ 1.49
SCAF8-204ENST00000461219 CWC27Q6UX04 472 aaKnown RBP24.38■■□□□ 1.49
SCAF8-204ENST00000461219 NBPF11Q86T75 865 aa24.38■■□□□ 1.49
SCAF8-204ENST00000461219 RAET1EQ8TD07 263 aa24.38■■□□□ 1.49
SCAF8-204ENST00000461219 TRIM47Q96LD4 638 aa24.38■■□□□ 1.49
SCAF8-204ENST00000461219 P2RX7Q99572 595 aaKnown RBP24.38■■□□□ 1.49
SCAF8-204ENST00000461219 TANGO6Q9C0B7 1094 aa24.38■■□□□ 1.49
SCAF8-204ENST00000461219 RPAP3Q9H6T3 665 aaPredicted RBP24.38■■□□□ 1.49
SCAF8-204ENST00000461219 CWC22Q9HCG8 908 aaKnown RBP24.38■■□□□ 1.49
SCAF8-204ENST00000461219 MYPNQ86TC9 1320 aa24.37■■□□□ 1.49
SCAF8-204ENST00000461219 DOCK3Q8IZD9 2030 aa24.37■■□□□ 1.49
SCAF8-204ENST00000461219 TSPY3P0CV98 308 aa24.37■■□□□ 1.49
SCAF8-204ENST00000461219 TSPY8P0CW00 308 aa24.37■■□□□ 1.49
SCAF8-204ENST00000461219 RASA1P20936 1047 aa24.37■■□□□ 1.49
SCAF8-204ENST00000461219 COA7Q96BR5 231 aa24.37■■□□□ 1.49
SCAF8-204ENST00000461219 PAGR1Q9BTK6 254 aa24.37■■□□□ 1.49
SCAF8-204ENST00000461219 GOPCQ9HD26 462 aa24.37■■□□□ 1.49
SCAF8-204ENST00000461219 PTCH2Q9Y6C5 1203 aa24.37■■□□□ 1.49
SCAF8-204ENST00000461219 GREB1LQ9C091 1923 aaPredicted RBP24.37■■□□□ 1.49
SCAF8-204ENST00000461219 EEF2P13639 858 aaKnown RBP24.36■■□□□ 1.49
SCAF8-204ENST00000461219 CAP1Q01518 475 aa24.36■■□□□ 1.49
SCAF8-204ENST00000461219 VPS53Q5VIR6 699 aa24.36■■□□□ 1.49
SCAF8-204ENST00000461219 TOMM22Q9NS69 142 aa24.36■■□□□ 1.49
SCAF8-204ENST00000461219 SRRDQ9UH36 339 aa24.36■■□□□ 1.49
SCAF8-204ENST00000461219 A0A1W2PRG0 241 aa24.35■■□□□ 1.49
SCAF8-204ENST00000461219 SAMD1Q6SPF0 538 aaPredicted RBP24.35■■□□□ 1.49
SCAF8-204ENST00000461219 CENPQQ7L2Z9 268 aaPredicted RBP24.35■■□□□ 1.49
SCAF8-204ENST00000461219 GPRC5AQ8NFJ5 357 aa24.35■■□□□ 1.49
SCAF8-204ENST00000461219 LPAR1Q92633 364 aa24.35■■□□□ 1.49
SCAF8-204ENST00000461219 HSPD1P10809 573 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms