RNA–Protein interactions for RNA: ENST00000460820.6

ATP5C1-204, Transcript of ATP synthase subunit gamma, mitochondrial, human

TSL 2

Gene ATP5C1, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP5C1-204	ENST00000460820	CATIP	Q7Z7H3	387 aa		13.77	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.77	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ZDHHC15	Q96MV8	337 aa		13.77	□□□□□ -0.21
ATP5C1-204	ENST00000460820	HPS5	Q9UPZ3	1129 aa		13.77	□□□□□ -0.21
ATP5C1-204	ENST00000460820	PSME4	Q14997	1843 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	TNKS	O95271	1327 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	FLT1	P17948	1338 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	TSPY2	A6NKD2	308 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	USP17L8	P0C7I0	530 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	MAP3K9	P80192	1104 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ATL3	Q6DD88	541 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	MAPKAPK5	Q8IW41	473 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	LARGE2	Q8N3Y3	721 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	CERS5	Q8N5B7	392 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	INCENP	Q9NQS7	918 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	TCP11L1	Q9NUJ3	509 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	USP40	Q9NVE5	1235 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	RBM28	Q9NW13	759 aa	Known RBP	13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	VPS9D1	Q9Y2B5	631 aa		13.76	□□□□□ -0.21
ATP5C1-204	ENST00000460820	STK36	Q9NRP7	1315 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	CYP2D7	A0A087X1C5	515 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820		F8W031	263 aa	Predicted RBP	13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	JAK2	O60674	1132 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	DDAH1	O94760	285 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	CTDNEP1	O95476	244 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	MBD3	O95983	291 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	PTPRE	P23469	700 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	IARS	P41252	1262 aa	Known RBP	13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	CRK	P46108	304 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	SEC23A	Q15436	765 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	RTN1	Q16799	776 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	C16orf86	Q6ZW13	317 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	MICU3	Q86XE3	530 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	DGKH	Q86XP1	1220 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	TRIM22	Q8IYM9	498 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ZNF654	Q8IZM8	581 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	KCTD12	Q96CX2	325 aa	Known RBP	13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	DDX11	Q96FC9	970 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	MAP3K14	Q99558	947 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	NCOA5	Q9HCD5	579 aa	Known RBP	13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	PLA2G2E	Q9NZK7	142 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ORC3	Q9UBD5	711 aa	Predicted RBP	13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	SWAP70	Q9UH65	585 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	HDAC9	Q9UKV0	1011 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	TACC3	Q9Y6A5	838 aa		13.75	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ECM29	Q5VYK3	1845 aa		13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	HLA-DOA	P06340	250 aa		13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	IFNAR1	P17181	557 aa		13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	KRT85	P78386	507 aa		13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	SSRP1	Q08945	709 aa	Known RBP	13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	MFSD10	Q14728	455 aa		13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	KLHL40	Q2TBA0	621 aa		13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	NIM1K	Q8IY84	436 aa		13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	STK11IP	Q8N1F8	1099 aa		13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ENAH	Q8N8S7	591 aa	Predicted RBP	13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	FANCB	Q8NB91	859 aa		13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	TMEM87A	Q8NBN3	555 aa		13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ANKS1A	Q92625	1134 aa		13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	DHX36	Q9H2U1	1008 aa	Known RBP	13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	DDX49	Q9Y6V7	483 aa	Known RBP	13.74	□□□□□ -0.21
ATP5C1-204	ENST00000460820	DDX60L	Q5H9U9	1706 aa	Known RBP	13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	PRPF40A	O75400	957 aa	Known RBP	13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	TSPY3	P0CV98	308 aa		13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	TSPY8	P0CW00	308 aa		13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	CYP2D6	P10635	497 aa		13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	TFAP4	Q01664	338 aa		13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	TRIM29	Q14134	588 aa		13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	OGFOD1	Q8N543	542 aa		13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	C8orf76	Q96K31	380 aa		13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ZKSCAN3	Q9BRR0	538 aa		13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	LMBRD1	Q9NUN5	540 aa		13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	CFAP45	Q9UL16	551 aa		13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ZNRF3	Q9ULT6	936 aa		13.73	□□□□□ -0.21
ATP5C1-204	ENST00000460820	BRCA1	P38398	1863 aa	Known RBP	13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ZNF646	O15015	1829 aa	Predicted RBP	13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	PRDM1	O75626	825 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	FMNL1	O95466	1100 aa	Predicted RBP	13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	VIL1	P09327	827 aa	Known RBP	13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	XBP1	P17861	261 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	KIF5B	P33176	963 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	ADD1	P35611	737 aa	Known RBP	13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	CDK8	P49336	464 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	SCNN1D	P51172	638 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	RBM5	P52756	815 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	2e-6	■■■■□ 23.2
ATP5C1-204	ENST00000460820	AKAP17A	Q02040	695 aa	Known RBP	13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	CDC42EP5	Q6NZY7	148 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	CDC37L1	Q7L3B6	337 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	KIAA0825	Q8IV33	1275 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	AGBL3	Q8NEM8	1001 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	CTCFL	Q8NI51	663 aa	Predicted RBP	13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	JDP2	Q8WYK2	163 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	IDI2	Q9BXS1	227 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	TAOK3	Q9H2K8	898 aa		13.72	□□□□□ -0.21
ATP5C1-204	ENST00000460820	KAT14	Q9H8E8	782 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms