RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 NBPF12Q5TAG4 269 aaPredicted RBP8.97□□□□□ -0.97
ABCA4-202ENST00000460514 SH3BP5LQ7L8J4 393 aa8.97□□□□□ -0.97
ABCA4-202ENST00000460514 ARMC9Q7Z3E5 817 aa8.97□□□□□ -0.97
ABCA4-202ENST00000460514 NCOA7Q8NI08 942 aa8.97□□□□□ -0.97
ABCA4-202ENST00000460514 ESR2Q92731 530 aa8.97□□□□□ -0.97
ABCA4-202ENST00000460514 KCNB2Q92953 911 aa8.97□□□□□ -0.97
ABCA4-202ENST00000460514 GINM1Q9NU53 330 aa8.97□□□□□ -0.97
ABCA4-202ENST00000460514 E7EWF7 191 aa8.96□□□□□ -0.98
ABCA4-202ENST00000460514 GTPBP6O43824 516 aaPredicted RBP8.96□□□□□ -0.98
ABCA4-202ENST00000460514 FGRP09769 529 aa8.96□□□□□ -0.98
ABCA4-202ENST00000460514 IREB2P48200 963 aaKnown RBP8.96□□□□□ -0.98
ABCA4-202ENST00000460514 RBM25P49756 843 aaKnown RBP8.96□□□□□ -0.98
ABCA4-202ENST00000460514 FKBP1BP68106 108 aa8.96□□□□□ -0.98
ABCA4-202ENST00000460514 CTDSPL2Q05D32 466 aa8.96□□□□□ -0.98
ABCA4-202ENST00000460514 FSTL1Q12841 308 aa8.96□□□□□ -0.98
ABCA4-202ENST00000460514 TTLL12Q14166 644 aaPredicted RBP8.96□□□□□ -0.98
ABCA4-202ENST00000460514 SART3Q15020 963 aaKnown RBP8.96□□□□□ -0.98
ABCA4-202ENST00000460514 CERKLQ49MI3 558 aaPredicted RBP8.96□□□□□ -0.98
ABCA4-202ENST00000460514 CCDC178Q5BJE1 867 aa8.96□□□□□ -0.98
ABCA4-202ENST00000460514 RRP12Q5JTH9 1297 aaKnown RBP8.96□□□□□ -0.98
ABCA4-202ENST00000460514 TRAF7Q6Q0C0 670 aa8.96□□□□□ -0.98
ABCA4-202ENST00000460514 IQCA1Q86XH1 822 aa8.96□□□□□ -0.98
ABCA4-202ENST00000460514 DYNLL2Q96FJ2 89 aa8.96□□□□□ -0.98
ABCA4-202ENST00000460514 CABP5Q9NP86 173 aa8.96□□□□□ -0.98
ABCA4-202ENST00000460514 SCAF8Q9UPN6 1271 aaKnown RBP8.96□□□□□ -0.98
ABCA4-202ENST00000460514 ERICH2A1L162 156 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 UNCXA6NJT0 531 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 TSPY2A6NKD2 308 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 RANBP6O60518 1105 aaKnown RBP8.95□□□□□ -0.98
ABCA4-202ENST00000460514 CTNND1O60716 968 aaKnown RBP8.95□□□□□ -0.98
ABCA4-202ENST00000460514 TSPY3P0CV98 308 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 TSPY8P0CW00 308 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 MCM5P33992 734 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 PRAMEF18Q5VWM3 479 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 TATDN1Q6P1N9 297 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 BLOC1S2Q6QNY1 142 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 MIGA2Q7L4E1 593 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 TBC1D10CQ8IV04 446 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 STK11IPQ8N1F8 1099 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 C2orf69Q8N8R5 385 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 TBC1D32Q96NH3 1257 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 NEK1Q96PY6 1258 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 MTA3Q9BTC8 594 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 TM6SF1Q9BZW5 370 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 ZNF408Q9H9D4 720 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.95□□□□□ -0.98
ABCA4-202ENST00000460514 SNX14Q9Y5W7 946 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 MYH8P13535 1937 aa8.95□□□□□ -0.98
ABCA4-202ENST00000460514 B4E1Z4 1266 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 MPHOSPH10O00566 681 aaKnown RBP8.94□□□□□ -0.98
ABCA4-202ENST00000460514 CELF2O95319 508 aaKnown RBP8.94□□□□□ -0.98
ABCA4-202ENST00000460514 ITGBL1O95965 494 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-202ENST00000460514 ASNSP08243 561 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 RASA1P20936 1047 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 SHMT1P34896 483 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 CAP2P40123 477 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 MAP3K9P80192 1104 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 TFAP4Q01664 338 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 ABCB5Q2M3G0 1257 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 TMEM179Q6ZVK1 233 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 SLC44A5Q8NCS7 719 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 KLRG1Q96E93 195 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 IL17RAQ96F46 866 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 JAKMIP1Q96N16 626 aaKnown RBP8.94□□□□□ -0.98
ABCA4-202ENST00000460514 WRNIP1Q96S55 665 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 UBAC1Q9BSL1 405 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 TBC1D2Q9BYX2 928 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 NBPF3Q9H094 633 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 GBA2Q9HCG7 927 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-202ENST00000460514 PICK1Q9NRD5 415 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 ZNF112Q9UJU3 913 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 ANGEL1Q9UNK9 670 aaKnown RBP8.94□□□□□ -0.98
ABCA4-202ENST00000460514 CSADQ9Y600 493 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 CYP46A1Q9Y6A2 500 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 WDR19Q8NEZ3 1342 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 SIPA1L1O43166 1804 aa8.94□□□□□ -0.98
ABCA4-202ENST00000460514 FAM196BA6NMK8 535 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 TRAF5O00463 557 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 LCE2BO14633 110 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 KDM4AO75164 1064 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 USP2O75604 605 aaPredicted RBP8.93□□□□□ -0.98
ABCA4-202ENST00000460514 PRDM1O75626 825 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 PPP1R37O75864 691 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 CASTP20810 708 aaKnown RBP8.93□□□□□ -0.98
ABCA4-202ENST00000460514 FGD1P98174 961 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 LAPTM4AQ15012 233 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 RABEP1Q15276 862 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 MAP3K11Q16584 847 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 NOL9Q5SY16 702 aaKnown RBP8.93□□□□□ -0.98
ABCA4-202ENST00000460514 STOX1Q6ZVD7 989 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 DHX32Q7L7V1 743 aaKnown RBP8.93□□□□□ -0.98
ABCA4-202ENST00000460514 ANKRD13AQ8IZ07 590 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 SCYL3Q8IZE3 742 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 TMTC2Q8N394 836 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 NEDD1Q8NHV4 660 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 TMEM87BQ96K49 555 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 DNAJC18Q9H819 358 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 AS3MTQ9HBK9 375 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 TCP11L1Q9NUJ3 509 aa8.93□□□□□ -0.98
ABCA4-202ENST00000460514 NEDD4P46934 1319 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms