RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 RAB3GAP1Q15042 981 aa12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 LDLRAD1Q5T700 205 aa12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 NEDD1Q8NHV4 660 aa12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 KCNB2Q92953 911 aa12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 CHMP4CQ96CF2 233 aa12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 PCDHB8Q9UN66 801 aa12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 MYH7P12883 1935 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 PHF20L1A8MW92 1017 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 KDM4AO75164 1064 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 TTLL1O95922 423 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 RASA1P20936 1047 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 RBM25P49756 843 aaKnown RBP12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 VASPP50552 380 aaPredicted RBP12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 USP14P54578 494 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 ANKRD1Q15327 319 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 DHX32Q7L7V1 743 aaKnown RBP12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 DGKHQ86XP1 1220 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 JAKMIP1Q96N16 626 aaKnown RBP12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 ZBTB21Q9ULJ3 1066 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 TLL2Q9Y6L7 1015 aa12.96□□□□□ -0.33
SMNDC1-203ENST00000460483 ADAMTSL1Q8N6G6 1762 aa12.96□□□□□ -0.34
SMNDC1-203ENST00000460483 AK9Q5TCS8 1911 aa12.96□□□□□ -0.34
SMNDC1-203ENST00000460483 B4E1Z4 1266 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 C19orf81C9J6K1 198 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 PRDM1O75626 825 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 GH2P01242 217 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 ZBTB48P10074 688 aaPredicted RBP12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 INHBEP58166 350 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 ICA1Q05084 483 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 VGLL4Q14135 290 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 CST9Q5W186 159 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 RGMBQ6NW40 437 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 SAPCD2Q86UD0 394 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 TBC1D10CQ8IV04 446 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 ZSCAN10Q96SZ4 725 aaPredicted RBP12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 FEZ1Q99689 392 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 GOPCQ9HD26 462 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 STX8Q9UNK0 236 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 SNX14Q9Y5W7 946 aa12.95□□□□□ -0.34
SMNDC1-203ENST00000460483 SPDYE5A6NIY4 337 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 FAM196BA6NMK8 535 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 UBE2Q2LH0YL09 131 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 CXCL11O14625 94 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 IFIT3O14879 490 aaKnown RBP12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 ST18O60284 1047 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 PTPRAP18433 802 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 ZNF157P51786 506 aaPredicted RBP12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 FASTKD5Q7L8L6 764 aaKnown RBP12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 SLC44A5Q8NCS7 719 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 ZNF280CQ8ND82 737 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 ZKSCAN4Q969J2 545 aaPredicted RBP12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 WDR18Q9BV38 432 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 DNAJC18Q9H819 358 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 KAT14Q9H8E8 782 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 TMOD4Q9NZQ9 345 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 NYAP2Q9P242 653 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 ZHX2Q9Y6X8 837 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
SMNDC1-203ENST00000460483 ECM29Q5VYK3 1845 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 USP17L10C9JJH3 530 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 GDF11O95390 407 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 CALM1P0DP23 149 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 CALM2P0DP24 149 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 CALM3P0DP25 149 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 TOP1P11387 765 aaKnown RBP12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 AKR1B1P15121 316 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 CASTP20810 708 aaKnown RBP12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 INPP5BP32019 993 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 GTF2A2P52657 109 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 ATP2B2Q01814 1243 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 PABPC4Q13310 644 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 PPIL2Q13356 520 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 SNAPC2Q13487 334 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 WTAPQ15007 396 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 RABEP1Q15276 862 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 TMEM67Q5HYA8 995 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 IFIT1BQ5T764 474 aaKnown RBP12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 OTUD7BQ6GQQ9 843 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 PAXIP1Q6ZW49 1069 aaPredicted RBP12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 RUFY3Q7L099 469 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 LPAR1Q92633 364 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 IL17RAQ96F46 866 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 ZSWIM6Q9HCJ5 1215 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 MTMR4Q9NYA4 1195 aa12.93□□□□□ -0.34
SMNDC1-203ENST00000460483 NEDD4P46934 1319 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 CCDC69A6NI79 296 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 PRC1O43663 620 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 LIFRP42702 1097 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 MCM2P49736 904 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 C1QTNF8P60827 252 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 NOGQ13253 232 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms