RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 SEPT2Q15019 361 aa12.56□□□□□ -0.4
CDHR4-203ENST00000460430 SHROOM1Q2M3G4 852 aaPredicted RBP12.56□□□□□ -0.4
CDHR4-203ENST00000460430 CLEC10AQ8IUN9 316 aa12.56□□□□□ -0.4
CDHR4-203ENST00000460430 ANKRD13AQ8IZ07 590 aa12.56□□□□□ -0.4
CDHR4-203ENST00000460430 C2orf69Q8N8R5 385 aa12.56□□□□□ -0.4
CDHR4-203ENST00000460430 ENAHQ8N8S7 591 aaPredicted RBP12.56□□□□□ -0.4
CDHR4-203ENST00000460430 BRF1Q92994 677 aa12.56□□□□□ -0.4
CDHR4-203ENST00000460430 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
CDHR4-203ENST00000460430 CEP95Q96GE4 821 aa12.56□□□□□ -0.4
CDHR4-203ENST00000460430 KANSL2Q9H9L4 492 aa12.56□□□□□ -0.4
CDHR4-203ENST00000460430 TCP11L1Q9NUJ3 509 aa12.56□□□□□ -0.4
CDHR4-203ENST00000460430 ZNF112Q9UJU3 913 aa12.56□□□□□ -0.4
CDHR4-203ENST00000460430 OTOFQ9HC10 1997 aa12.56□□□□□ -0.4
CDHR4-203ENST00000460430 ATAD5Q96QE3 1844 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 GREB1LQ9C091 1923 aaPredicted RBP12.55□□□□□ -0.4
CDHR4-203ENST00000460430 IGKV6D-41A0A0C4DH26 115 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 ITGBL1O95965 494 aaPredicted RBP12.55□□□□□ -0.4
CDHR4-203ENST00000460430 MAP3K9P80192 1104 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 NOL9Q5SY16 702 aaKnown RBP12.55□□□□□ -0.4
CDHR4-203ENST00000460430 MOB2Q70IA6 237 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 DGKHQ86XP1 1220 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 HSCBQ8IWL3 235 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 TTC14Q96N46 770 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 FEZ1Q99689 392 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.55□□□□□ -0.4
CDHR4-203ENST00000460430 SH2D4AQ9H788 454 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 KAT14Q9H8E8 782 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 LY9Q9HBG7 655 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 ARHGEF10LQ9HCE6 1279 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 IL17RBQ9NRM6 502 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 MTMR4Q9NYA4 1195 aa12.55□□□□□ -0.4
CDHR4-203ENST00000460430 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.55□□□□□ -0.4
CDHR4-203ENST00000460430 KLF18A0A0U1RQI7 1052 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 GOLGA8BA8MQT2 603 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 RAD21O60216 631 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 MCM2P49736 904 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 JAG1P78504 1218 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 FSTL1Q12841 308 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 TOB2Q14106 344 aaPredicted RBP12.54□□□□□ -0.4
CDHR4-203ENST00000460430 MAP3K11Q16584 847 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 SYNE3Q6ZMZ3 975 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 CATIPQ7Z7H3 387 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 LRRC47Q8N1G4 583 aaKnown RBP12.54□□□□□ -0.4
CDHR4-203ENST00000460430 TMTC2Q8N394 836 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 IGDCC4Q8TDY8 1250 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 ELP3Q9H9T3 547 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 AS3MTQ9HBK9 375 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 GPHNQ9NQX3 736 aaPredicted RBP12.54□□□□□ -0.4
CDHR4-203ENST00000460430 CLIP2Q9UDT6 1046 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 SLC12A7Q9Y666 1083 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 SNCAIPQ9Y6H5 919 aa12.54□□□□□ -0.4
CDHR4-203ENST00000460430 USP17L5A8MUK1 530 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 UBE2Q2LH0YL09 131 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 TOP1P11387 765 aaKnown RBP12.53□□□□□ -0.4
CDHR4-203ENST00000460430 EEF2P13639 858 aaKnown RBP12.53□□□□□ -0.4
CDHR4-203ENST00000460430 PTPRAP18433 802 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 GUCY1A2P33402 732 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 LIFRP42702 1097 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 APOBRQ0VD83 1088 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 SEC23AQ15436 765 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.53□□□□□ -0.4
CDHR4-203ENST00000460430 CCDC84Q86UT8 332 aaPredicted RBP12.53□□□□□ -0.4
CDHR4-203ENST00000460430 PNMA1Q8ND90 353 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 TMEM47Q9BQJ4 181 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 ALDH8A1Q9H2A2 487 aaPredicted RBP12.53□□□□□ -0.4
CDHR4-203ENST00000460430 NYAP2Q9P242 653 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 ISY1Q9ULR0 285 aaKnown RBP12.53□□□□□ -0.4
CDHR4-203ENST00000460430 MTMR7Q9Y216 660 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 TRPM7Q96QT4 1865 aa12.53□□□□□ -0.4
CDHR4-203ENST00000460430 DDAH1O94760 285 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 BECN1Q14457 450 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 RCSD1Q6JBY9 416 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 SGMS1Q86VZ5 419 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 MICU3Q86XE3 530 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 ZNF654Q8IZM8 581 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 FBXL16Q8N461 479 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 NUP133Q8WUM0 1156 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 CLMNQ96JQ2 1002 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 LARP6Q9BRS8 491 aaKnown RBP12.52□□□□□ -0.41
CDHR4-203ENST00000460430 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 SENP2Q9HC62 589 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 GOPCQ9HD26 462 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 ZHX2Q9Y6X8 837 aa12.52□□□□□ -0.41
CDHR4-203ENST00000460430 UNCXA6NJT0 531 aa12.51□□□□□ -0.41
CDHR4-203ENST00000460430 TRIM75PA6NK02 468 aa12.51□□□□□ -0.41
CDHR4-203ENST00000460430 GOLGA8AA7E2F4 631 aa12.51□□□□□ -0.41
CDHR4-203ENST00000460430 ZBTB43O43298 467 aa12.51□□□□□ -0.41
CDHR4-203ENST00000460430 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
CDHR4-203ENST00000460430 CALM1P0DP23 149 aa12.51□□□□□ -0.41
CDHR4-203ENST00000460430 CALM2P0DP24 149 aa12.51□□□□□ -0.41
CDHR4-203ENST00000460430 CALM3P0DP25 149 aa12.51□□□□□ -0.41
CDHR4-203ENST00000460430 ECE1P42892 770 aa12.51□□□□□ -0.41
CDHR4-203ENST00000460430 METAP2P50579 478 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDHR4-203ENST00000460430 HUNKP57058 714 aa12.51□□□□□ -0.41
CDHR4-203ENST00000460430 STK3Q13188 491 aa12.51□□□□□ -0.41
CDHR4-203ENST00000460430 ZYXQ15942 572 aaKnown RBP12.51□□□□□ -0.41
CDHR4-203ENST00000460430 CST9Q5W186 159 aa12.51□□□□□ -0.41
CDHR4-203ENST00000460430 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms