RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 CTGFP29279 349 aa17.86■□□□□ 0.45
ATG4B-213ENST00000460211 JAG1P78504 1218 aa17.86■□□□□ 0.45
ATG4B-213ENST00000460211 MTMR2Q13614 643 aa17.86■□□□□ 0.45
ATG4B-213ENST00000460211 SMCR8Q8TEV9 937 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-213ENST00000460211 DYNLL2Q96FJ2 89 aa17.86■□□□□ 0.45
ATG4B-213ENST00000460211 FEZ1Q99689 392 aa17.86■□□□□ 0.45
ATG4B-213ENST00000460211 HELLSQ9NRZ9 838 aa17.86■□□□□ 0.45
ATG4B-213ENST00000460211 MINDY4BA8MYZ0 360 aa17.85■□□□□ 0.45
ATG4B-213ENST00000460211 SIPA1L1O43166 1804 aa17.85■□□□□ 0.45
ATG4B-213ENST00000460211 OSBPP22059 807 aa17.85■□□□□ 0.45
ATG4B-213ENST00000460211 PSMC4P43686 418 aa17.85■□□□□ 0.45
ATG4B-213ENST00000460211 CDK8P49336 464 aa17.85■□□□□ 0.45
ATG4B-213ENST00000460211 USP14P54578 494 aa17.85■□□□□ 0.45
ATG4B-213ENST00000460211 USP17L2Q6R6M4 530 aa17.85■□□□□ 0.45
ATG4B-213ENST00000460211 C17orf99Q6UX52 265 aa17.85■□□□□ 0.45
ATG4B-213ENST00000460211 TMEM179Q6ZVK1 233 aa17.85■□□□□ 0.45
ATG4B-213ENST00000460211 C16orf86Q6ZW13 317 aa17.85■□□□□ 0.45
ATG4B-213ENST00000460211 SEC62Q99442 399 aaKnown RBP17.85■□□□□ 0.45
ATG4B-213ENST00000460211 ZNF287Q9HBT7 754 aa17.85■□□□□ 0.45
ATG4B-213ENST00000460211 CYP2D7A0A087X1C5 515 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 SLC3A2P08195 630 aaKnown RBP17.84■□□□□ 0.45
ATG4B-213ENST00000460211 CYP2C8P10632 490 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 SHROOM1Q2M3G4 852 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-213ENST00000460211 CHRDL2Q6WN34 429 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 IFNL3Q8IZI9 196 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 SLC44A5Q8NCS7 719 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 DPF3Q92784 378 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 SHISA4Q96DD7 197 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 TRIM47Q96LD4 638 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 NAPBQ9H115 298 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 MKNK2Q9HBH9 465 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 TRIOBPQ9H2D6 2365 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 NAV1Q8NEY1 1877 aa17.84■□□□□ 0.45
ATG4B-213ENST00000460211 HIP1O00291 1037 aa17.83■□□□□ 0.44
ATG4B-213ENST00000460211 FMNL1O95466 1100 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-213ENST00000460211 GNRH1P01148 92 aa17.83■□□□□ 0.44
ATG4B-213ENST00000460211 PRMT2P55345 433 aa17.83■□□□□ 0.44
ATG4B-213ENST00000460211 IRX3P78415 501 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-213ENST00000460211 EVX2Q03828 476 aa17.83■□□□□ 0.44
ATG4B-213ENST00000460211 SEPT2Q15019 361 aa17.83■□□□□ 0.44
ATG4B-213ENST00000460211 MCMDC2Q4G0Z9 681 aa17.83■□□□□ 0.44
ATG4B-213ENST00000460211 TREML2Q5T2D2 321 aa17.83■□□□□ 0.44
ATG4B-213ENST00000460211 RAET1EQ8TD07 263 aa17.83■□□□□ 0.44
ATG4B-213ENST00000460211 SRRDQ9UH36 339 aa17.83■□□□□ 0.44
ATG4B-213ENST00000460211 MFAP1P55081 439 aaKnown RBP17.82■□□□□ 0.44
ATG4B-213ENST00000460211 KIAA1683Q9H0B3 1180 aa17.82■□□□□ 0.44
ATG4B-213ENST00000460211 EPB41L4AQ9HCS5 686 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-213ENST00000460211 MYPNQ86TC9 1320 aa17.81■□□□□ 0.44
ATG4B-213ENST00000460211 SDSP20132 328 aa17.81■□□□□ 0.44
ATG4B-213ENST00000460211 HOXD10P28358 340 aa17.81■□□□□ 0.44
ATG4B-213ENST00000460211 GRK4P32298 578 aa17.81■□□□□ 0.44
ATG4B-213ENST00000460211 GCLCP48506 637 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-213ENST00000460211 SH2D4AQ9H788 454 aa17.81■□□□□ 0.44
ATG4B-213ENST00000460211 ARHGEF10LQ9HCE6 1279 aa17.81■□□□□ 0.44
ATG4B-213ENST00000460211 DIAPH3Q9NSV4 1193 aa17.81■□□□□ 0.44
ATG4B-213ENST00000460211 EMILIN3Q9NT22 766 aa17.81■□□□□ 0.44
ATG4B-213ENST00000460211 BIN2Q9UBW5 565 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-213ENST00000460211 DDX60LQ5H9U9 1706 aaKnown RBP17.81■□□□□ 0.44
ATG4B-213ENST00000460211 ADGRA2Q96PE1 1338 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 SZT2Q5T011 3432 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 ATAD5Q96QE3 1844 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 NEFLP07196 543 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 CCL5P13501 91 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 AKR1B1P15121 316 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 HOXA7P31268 230 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-213ENST00000460211 GUCY1A2P33402 732 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 ZYXQ15942 572 aaKnown RBP17.8■□□□□ 0.44
ATG4B-213ENST00000460211 CCDC129Q6ZRS4 1044 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 ZNF444Q8N0Y2 327 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-213ENST00000460211 ACER1Q8TDN7 264 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 C12orf42Q96LP6 360 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 FAM227BQ96M60 508 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 ASCC2Q9H1I8 757 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-213ENST00000460211 KANSL2Q9H9L4 492 aa17.8■□□□□ 0.44
ATG4B-213ENST00000460211 PHIPQ8WWQ0 1821 aa17.79■□□□□ 0.44
ATG4B-213ENST00000460211 BCRP11274 1271 aa17.79■□□□□ 0.44
ATG4B-213ENST00000460211 PDE4AP27815 886 aa17.79■□□□□ 0.44
ATG4B-213ENST00000460211 ICA1Q05084 483 aa17.79■□□□□ 0.44
ATG4B-213ENST00000460211 PDE4BQ07343 736 aa17.79■□□□□ 0.44
ATG4B-213ENST00000460211 NMIQ13287 307 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-213ENST00000460211 STK11IPQ8N1F8 1099 aa17.79■□□□□ 0.44
ATG4B-213ENST00000460211 GTF3C2Q8WUA4 911 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-213ENST00000460211 RBM27Q9P2N5 1060 aaKnown RBP17.79■□□□□ 0.44
ATG4B-213ENST00000460211 BAZ2AQ9UIF9 1905 aaKnown RBP17.78■□□□□ 0.44
ATG4B-213ENST00000460211 MGAMO43451 1857 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 A0A0D9SFI3 127 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 USP17L15C9J2P7 530 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 USP17L13C9JLJ4 530 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 USP17L11C9JVI0 530 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 USP17L18D6R9N7 530 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 USP17L22D6RA61 530 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 USP17L17D6RBQ6 530 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 USP17L19D6RCP7 530 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 USP17L20D6RJB6 530 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 SMIM22K7EJ46 135 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 FCGRTP55899 365 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 PRKCZQ05513 592 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 USP17L24Q0WX57 530 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 ANKRD13CQ8N6S4 541 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 RNF208Q9H0X6 261 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms