RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 IRX3P78415 501 aaPredicted RBP28.43■■■□□ 2.14
HOXB3-202ENST00000460160 SMC5Q8IY18 1101 aa28.43■■■□□ 2.14
HOXB3-202ENST00000460160 AMOTL1Q8IY63 956 aa28.43■■■□□ 2.14
HOXB3-202ENST00000460160 C12orf42Q96LP6 360 aa28.43■■■□□ 2.14
HOXB3-202ENST00000460160 KIAA1683Q9H0B3 1180 aa28.43■■■□□ 2.14
HOXB3-202ENST00000460160 RWDD1Q9H446 243 aaPredicted RBP28.43■■■□□ 2.14
HOXB3-202ENST00000460160 GSG1L2A8MUP6 293 aa28.43■■■□□ 2.14
HOXB3-202ENST00000460160 M0R2C6 588 aa28.43■■■□□ 2.14
HOXB3-202ENST00000460160 MPHOSPH10O00566 681 aaKnown RBP28.43■■■□□ 2.14
HOXB3-202ENST00000460160 GPAA1O43292 621 aa28.43■■■□□ 2.14
HOXB3-202ENST00000460160 PRKCZQ05513 592 aa28.43■■■□□ 2.14
HOXB3-202ENST00000460160 ZYXQ15942 572 aaKnown RBP28.43■■■□□ 2.14
HOXB3-202ENST00000460160 LRRFIP1Q32MZ4 808 aaKnown RBP28.43■■■□□ 2.14
HOXB3-202ENST00000460160 SH3TC2Q8TF17 1288 aa28.43■■■□□ 2.14
HOXB3-202ENST00000460160 P2RX7Q99572 595 aaKnown RBP28.43■■■□□ 2.14
HOXB3-202ENST00000460160 FSD1Q9BTV5 496 aa28.43■■■□□ 2.14
HOXB3-202ENST00000460160 PDE1AP54750 535 aa28.42■■■□□ 2.14
HOXB3-202ENST00000460160 C16orf86Q6ZW13 317 aa28.42■■■□□ 2.14
HOXB3-202ENST00000460160 NBPF11Q86T75 865 aa28.42■■■□□ 2.14
HOXB3-202ENST00000460160 IGHDP01880 384 aa28.41■■■□□ 2.14
HOXB3-202ENST00000460160 CDK8P49336 464 aa28.41■■■□□ 2.14
HOXB3-202ENST00000460160 USP14P54578 494 aa28.41■■■□□ 2.14
HOXB3-202ENST00000460160 GIMAP6Q6P9H5 292 aa28.41■■■□□ 2.14
HOXB3-202ENST00000460160 ARPP21Q9UBL0 812 aaPredicted RBP28.41■■■□□ 2.14
HOXB3-202ENST00000460160 POTEFA5A3E0 1075 aa28.4■■■□□ 2.14
HOXB3-202ENST00000460160 HERVK_113P62684 666 aa28.4■■■□□ 2.14
HOXB3-202ENST00000460160 TMEM179Q6ZVK1 233 aa28.4■■■□□ 2.14
HOXB3-202ENST00000460160 RAET1EQ8TD07 263 aa28.4■■■□□ 2.14
HOXB3-202ENST00000460160 LNPKQ9C0E8 428 aa28.4■■■□□ 2.14
HOXB3-202ENST00000460160 GABRQQ9UN88 632 aa28.4■■■□□ 2.14
HOXB3-202ENST00000460160 TNPO2O14787 897 aaKnown RBP28.39■■■□□ 2.14
HOXB3-202ENST00000460160 AKR1B1P15121 316 aa28.39■■■□□ 2.14
HOXB3-202ENST00000460160 SEC62Q99442 399 aaKnown RBP28.39■■■□□ 2.14
HOXB3-202ENST00000460160 EPB41L4AQ9HCS5 686 aaPredicted RBP28.39■■■□□ 2.14
HOXB3-202ENST00000460160 MORF4L1Q9UBU8 362 aa28.39■■■□□ 2.14
HOXB3-202ENST00000460160 SBK1Q52WX2 424 aa28.38■■■□□ 2.13
HOXB3-202ENST00000460160 A0A1W2PRG0 241 aa28.38■■■□□ 2.13
HOXB3-202ENST00000460160 GNAT2P19087 354 aa28.38■■■□□ 2.13
HOXB3-202ENST00000460160 VCAM1P19320 739 aa28.38■■■□□ 2.13
HOXB3-202ENST00000460160 ZMYM1Q5SVZ6 1142 aa28.38■■■□□ 2.13
HOXB3-202ENST00000460160 CCDC17Q96LX7 622 aa28.38■■■□□ 2.13
HOXB3-202ENST00000460160 TXNRD2Q9NNW7 524 aa28.38■■■□□ 2.13
HOXB3-202ENST00000460160 PEX10O60683 326 aa28.37■■■□□ 2.13
HOXB3-202ENST00000460160 B4GALNT3Q6L9W6 998 aa28.37■■■□□ 2.13
HOXB3-202ENST00000460160 USP17L15C9J2P7 530 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 USP17L13C9JLJ4 530 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 USP17L11C9JVI0 530 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 USP17L18D6R9N7 530 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 USP17L22D6RA61 530 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 USP17L17D6RBQ6 530 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 USP17L19D6RCP7 530 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 USP17L20D6RJB6 530 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 GRK4P32298 578 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 FLT3LGP49771 235 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 USP17L24Q0WX57 530 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 POTEEQ6S8J3 1075 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 CLEC10AQ8IUN9 316 aa28.36■■■□□ 2.13
HOXB3-202ENST00000460160 GREB1LQ9C091 1923 aaPredicted RBP28.35■■■□□ 2.13
HOXB3-202ENST00000460160 SIAH1Q8IUQ4 282 aa28.35■■■□□ 2.13
HOXB3-202ENST00000460160 EVI5LQ96CN4 794 aa28.35■■■□□ 2.13
HOXB3-202ENST00000460160 RBPJLQ9UBG7 517 aa28.35■■■□□ 2.13
HOXB3-202ENST00000460160 ROBO3Q96MS0 1386 aa28.34■■■□□ 2.13
HOXB3-202ENST00000460160 MYCP01106 439 aaPredicted RBP28.34■■■□□ 2.13
HOXB3-202ENST00000460160 CATSPERGQ6ZRH7 1159 aa28.34■■■□□ 2.13
HOXB3-202ENST00000460160 COA7Q96BR5 231 aa28.34■■■□□ 2.13
HOXB3-202ENST00000460160 TMEM106CQ9BVX2 250 aa28.34■■■□□ 2.13
HOXB3-202ENST00000460160 PLXNB2O15031 1838 aa28.33■■■□□ 2.13
HOXB3-202ENST00000460160 PATL2C9JE40 543 aaKnown RBP28.33■■■□□ 2.13
HOXB3-202ENST00000460160 NUCB1Q02818 461 aa28.33■■■□□ 2.13
HOXB3-202ENST00000460160 ICA1Q05084 483 aa28.33■■■□□ 2.13
HOXB3-202ENST00000460160 CHD1LQ86WJ1 897 aa28.33■■■□□ 2.13
HOXB3-202ENST00000460160 GPRC5AQ8NFJ5 357 aa28.33■■■□□ 2.13
HOXB3-202ENST00000460160 GTF3C2Q8WUA4 911 aaPredicted RBP28.33■■■□□ 2.13
HOXB3-202ENST00000460160 MINDY4BA8MYZ0 360 aa28.33■■■□□ 2.13
HOXB3-202ENST00000460160 APPP05067 770 aa28.33■■■□□ 2.13
HOXB3-202ENST00000460160 TDO2P48775 406 aa28.33■■■□□ 2.13
HOXB3-202ENST00000460160 IRF5Q13568 498 aa28.33■■■□□ 2.13
HOXB3-202ENST00000460160 SLAIN1Q8ND83 568 aa28.33■■■□□ 2.13
HOXB3-202ENST00000460160 RPAP3Q9H6T3 665 aaPredicted RBP28.33■■■□□ 2.13
HOXB3-202ENST00000460160 RLFQ13129 1914 aa28.32■■■□□ 2.12
HOXB3-202ENST00000460160 KIAA1755Q5JYT7 1200 aa28.32■■■□□ 2.12
HOXB3-202ENST00000460160 IFNL3Q8IZI9 196 aa28.32■■■□□ 2.12
HOXB3-202ENST00000460160 ADCY3O60266 1144 aa28.31■■■□□ 2.12
HOXB3-202ENST00000460160 EN2P19622 333 aaPredicted RBP28.31■■■□□ 2.12
HOXB3-202ENST00000460160 ERVK-9P63128 1117 aa28.31■■■□□ 2.12
HOXB3-202ENST00000460160 ERVK-24P63145 666 aa28.31■■■□□ 2.12
HOXB3-202ENST00000460160 MTFR1Q15390 333 aa28.31■■■□□ 2.12
HOXB3-202ENST00000460160 Q3C1V9 767 aa28.31■■■□□ 2.12
HOXB3-202ENST00000460160 PAGR1Q9BTK6 254 aa28.31■■■□□ 2.12
HOXB3-202ENST00000460160 ARHGEF10LQ9HCE6 1279 aa28.31■■■□□ 2.12
HOXB3-202ENST00000460160 TMX2Q9Y320 296 aa28.31■■■□□ 2.12
HOXB3-202ENST00000460160 RASA1P20936 1047 aa28.3■■■□□ 2.12
HOXB3-202ENST00000460160 STK11IPQ8N1F8 1099 aa28.3■■■□□ 2.12
HOXB3-202ENST00000460160 ELNP15502 786 aa28.29■■■□□ 2.12
HOXB3-202ENST00000460160 IRX6P78412 446 aaPredicted RBP28.29■■■□□ 2.12
HOXB3-202ENST00000460160 CCDC129Q6ZRS4 1044 aa28.29■■■□□ 2.12
HOXB3-202ENST00000460160 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.29■■■□□ 2.12
HOXB3-202ENST00000460160 NACAP1Q9BZK3 213 aa28.29■■■□□ 2.12
HOXB3-202ENST00000460160 GJD2Q9UKL4 321 aa28.29■■■□□ 2.12
HOXB3-202ENST00000460160 RABGAP1Q9Y3P9 1069 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms