RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 MMP1P03956 469 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 IFNAR1P17181 557 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 NLRP5P59047 1200 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 BRAPQ7Z569 592 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 CTCFLQ8NI51 663 aaPredicted RBP10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 BLZF1Q9H2G9 400 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 DBNDD1Q9H9R9 158 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 POLR3EQ9NVU0 708 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 CNTNAP4Q9C0A0 1308 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 APBA3O96018 575 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 TSPY3P0CV98 308 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 TSPY8P0CW00 308 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 ZSCAN20P17040 1043 aaPredicted RBP10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 BTDP43251 543 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 SEC23AQ15436 765 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 ALX1Q15699 326 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 SHROOM1Q2M3G4 852 aaPredicted RBP10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 HEATR3Q7Z4Q2 680 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 FAM177A1Q8N128 213 aaPredicted RBP10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 CSRNP2Q9H175 543 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 ANO10Q9NW15 660 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 PCDHA5Q9Y5H7 936 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 MYH13Q9UKX3 1938 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 PNPLA7Q6ZV29 1317 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 RBM5P52756 815 aaKnown RBP eCLIP10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 GRAPQ13588 217 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 TMED8Q6PL24 325 aaPredicted RBP10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 USP17L2Q6R6M4 530 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 TMC6Q7Z403 805 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 PROM2Q8N271 834 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 RASSF8Q8NHQ8 419 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 GRAPLQ8TC17 118 aaPredicted RBP10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 GTPBP4Q9BZE4 634 aaKnown RBP10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 XPO4Q9C0E2 1151 aaKnown RBP10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 V9GYY5 206 aaPredicted RBP10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 FRMPD2Q68DX3 1309 aaPredicted RBP10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 ERCC3P19447 782 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 PDE4BQ07343 736 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 PTPAQ15257 358 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 TEX11Q8IYF3 940 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 DPF2Q92785 391 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 ANKRD2Q9GZV1 360 aa10.35□□□□□ -0.75
MCF2L2-204ENST00000459750 PP2D1A8MPX8 630 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 DEXIO95424 95 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 MYCNP04198 464 aaPredicted RBP10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 TROAPQ12815 778 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 NAA30Q147X3 362 aaPredicted RBP10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 PKN1Q16512 942 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 TICAM2Q86XR7 235 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 ZNF444Q8N0Y2 327 aaPredicted RBP10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 MAP3K14Q99558 947 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 PDGFDQ9GZP0 370 aaPredicted RBP10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 KAT14Q9H8E8 782 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 CD209Q9NNX6 404 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 IL17RBQ9NRM6 502 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 AHDC1Q5TGY3 1603 aaPredicted RBP10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 MPHOSPH10O00566 681 aaKnown RBP10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 SERPINC1P01008 464 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 TXNRD1Q16881 649 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 SLC10A5Q5PT55 438 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 KRT27Q7Z3Y8 459 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 METTL16Q86W50 562 aaKnown RBP10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 LRRC47Q8N1G4 583 aaKnown RBP10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 NOL10Q9BSC4 688 aaKnown RBP10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 GGA1Q9UJY5 639 aa10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.34□□□□□ -0.75
MCF2L2-204ENST00000459750 YEATS4O95619 227 aa10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 ST5P78524 1137 aa10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 KIAA0825Q8IV33 1275 aa10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 KRI1Q8N9T8 703 aaKnown RBP10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 PNMA1Q8ND90 353 aa10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 A0A087X0B3 334 aa10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 TMEM232C9JQI7 657 aa10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 CMA1P23946 247 aa10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 TPD52L1Q16890 204 aaPredicted RBP10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 CFAP100Q494V2 611 aa10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 CPLX3Q8WVH0 158 aa10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 FANCLQ9NW38 375 aa10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 TRPC5Q9UL62 973 aaPredicted RBP10.33□□□□□ -0.76
MCF2L2-204ENST00000459750 CCDC196A0A1B0GTZ2 297 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 GOLGA6L6A8MZA4 724 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 ZNF500O60304 480 aaPredicted RBP10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 TYW1BQ6NUM6 668 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 ZNF804AQ7Z570 1209 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 GJA10Q969M2 543 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 MYH7P12883 1935 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 MMP10P09238 476 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 TAL1P17542 331 aaPredicted RBP10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 BMP6P22004 513 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 U2AF2P26368 475 aaKnown RBP eCLIP10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 CHRNA5P30532 468 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 PTGDRQ13258 359 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 TDRD7Q8NHU6 1098 aaKnown RBP10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 XDHP47989 1333 aa10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 CICQ96RK0 1608 aaPredicted RBP10.32□□□□□ -0.76
MCF2L2-204ENST00000459750 SKILP12757 684 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms